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GO:0000245

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description Spliceosomal complex assembly
Full defintion The aggregation, arrangement and bonding together of a spliceosomal complex, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.
Subterm of

Relationships

The relationship of GO:0000245 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
PMID
Mechanical devices of the spliceosome: motors, clocks, springs, and things.Staley JP, Guthrie C
Cell. 1998 Feb 6; 92 (3): 315–26.PMID: 9476892

Associated Lotus transcripts 15

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj2g3v1734680.1
– PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine max] gi|356534252|ref|XP_003535671.1|
GO terms
2
Lj4g3v1345750.1
– PREDICTED: gem-associated protein 2-like [Glycine max] gi|356536560|ref|XP_003536805.1|
GO terms
3
Lj4g3v1345770.1
– PREDICTED: gem-associated protein 2-like [Cicer arietinum] gi|502121888|ref|XP_004497479.1|
GO terms
3
Lj5g3v2298200.1
– PREDICTED: gem-associated protein 2-like [Cicer arietinum] gi|502121888|ref|XP_004497479.1|
GO terms
3
Lj6g3v1984610.1
– PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine max] gi|356534252|ref|XP_003535671.1|
GO terms
2
Lj6g3v1984610.2
– PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine max] gi|356534252|ref|XP_003535671.1|
GO terms
2
LotjaGi2g1v0388200.1
– Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G22350.2 Ubiquitin C-terminal hydrolases superfamily protein; Swiss-Prot: sp|Q53GS9|SNUT2_HUMAN U4/U6.U5 tri-snRNP-associated protein 2; TrEMBL-Plants: tr|V7BEY8|V7BEY8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0388200
GO terms
2
LotjaGi2g1v0388200.2
– Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G22350.2 Ubiquitin C-terminal hydrolases superfamily protein; Swiss-Prot: sp|Q53GS9|SNUT2_HUMAN U4/U6.U5 tri-snRNP-associated protein 2; TrEMBL-Plants: tr|V7BEY8|V7BEY8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0388200
GO terms
2
LotjaGi2g1v0388200.3
– Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G22350.2 Ubiquitin C-terminal hydrolases superfamily protein; Swiss-Prot: sp|Q3TIX9|SNUT2_MOUSE U4/U6.U5 tri-snRNP-associated protein 2; TrEMBL-Plants: tr|V7BEY8|V7BEY8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0388200
GO terms
2
LotjaGi6g1v0321900.1
– Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G22350.1 Ubiquitin C-terminal hydrolases superfamily protein; Swiss-Prot: sp|Q5R761|SNUT2_PONAB U4/U6.U5 tri-snRNP-associated protein 2; TrEMBL-Plants: tr|I1L9D9|I1L9D9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0321900
GO terms
2
LotjaGi6g1v0321900.2
– Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G22350.2 Ubiquitin C-terminal hydrolases superfamily protein; Swiss-Prot: sp|Q3TIX9|SNUT2_MOUSE U4/U6.U5 tri-snRNP-associated protein 2; TrEMBL-Plants: tr|V7BEY8|V7BEY8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0321900
GO terms
2
LotjaGi6g1v0351100.1
– Splicing factor 3B subunit 1; TAIR: AT5G64270.1 splicing factor; Swiss-Prot: sp|O57683|SF3B1_XENLA Splicing factor 3B subunit 1; TrEMBL-Plants: tr|V7BPY5|V7BPY5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0351100
GO terms
2
LotjaGi6g1v0351100.2
– Splicing factor 3B subunit 1; TAIR: AT5G64270.1 splicing factor; Swiss-Prot: sp|O57683|SF3B1_XENLA Splicing factor 3B subunit 1; TrEMBL-Plants: tr|V7BPY5|V7BPY5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0351100
GO terms
2
LotjaGi6g1v0351100.3
– Splicing factor 3B subunit 1; TAIR: AT5G64270.1 splicing factor; Swiss-Prot: sp|O57683|SF3B1_XENLA Splicing factor 3B subunit 1; TrEMBL-Plants: tr|V7BPY5|V7BPY5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0351100
GO terms
2
LotjaGi6g1v0351100.4
– Splicing factor 3B subunit 1; TAIR: AT5G64270.1 splicing factor; Swiss-Prot: sp|O57683|SF3B1_XENLA Splicing factor 3B subunit 1; TrEMBL-Plants: tr|V7BPY5|V7BPY5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0351100
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0003729
Molecular function MRNA binding 1 6.67