Domain Predictions — View

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cd09857

Source: CDD

Description

PIN_EXO1

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
Lj4g3v2628750.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: exonuclease 1-like [Cicer arietinum] gi\|502140539\|ref\|XP_004504251.1\|	Domains G3DSA:1.10.150.20 G3DSA:3.40.50.1010 IPR006084 IPR006085 IPR006086 IPR008918 IPR019974 IPR020045 IPR029060 IPR032641 PF00752 PF00867 PR00853 PS00841 PTHR11081 PTHR11081:SF8 SM00279 SM00484 SM00485 SSF47807 SSF88723 cd09857 cd09908 mobidb-lite	24
LotjaGi2g1v0199500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Flap endonuclease 1; TAIR: AT1G18090.1 5'-3' exonuclease family protein; Swiss-Prot: sp\|Q54ED2\|EXO1_DICDI Exonuclease 1; TrEMBL-Plants: tr\|V4TWE1\|V4TWE1_9ROSI Uncharacterized protein; Found in the gene: LotjaGi2g1v0199500_LC	Domains G3DSA:3.40.50.1010 IPR006084 IPR006085 IPR029060 PF00752 PR00853 PTHR11081 PTHR11081:SF27 SM00485 SSF88723 cd09857	11
LotjaGi2g1v0199500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Flap endonuclease 1; TAIR: AT1G18090.1 5'-3' exonuclease family protein; Swiss-Prot: sp\|Q54ED2\|EXO1_DICDI Exonuclease 1; TrEMBL-Plants: tr\|V4TWE1\|V4TWE1_9ROSI Uncharacterized protein; Found in the gene: LotjaGi2g1v0199500_LC	Domains G3DSA:3.40.50.1010 IPR006084 IPR006085 IPR029060 PF00752 PR00853 PTHR11081 PTHR11081:SF27 SM00485 SSF88723 cd09857	11
LotjaGi4g1v0216800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tetratricopeptide repeat (TPR)-containing protein; TAIR: AT4G22670.1 HSP70-interacting protein 1; Swiss-Prot: sp\|Q93YR3\|F10AL_ARATH FAM10 family protein At4g22670; TrEMBL-Plants: tr\|V9VGV1\|V9VGV1_LOTJA HSP70 interaction protein; Found in the gene: LotjaGi4g1v0216800_LC	Domains Coil G3DSA:1.10.260.100 G3DSA:1.25.40.10 IPR006636 IPR011990 IPR013026 IPR019734 IPR034649 IPR041243 PF13181 PF17830 PF18253 PS50005 PS50293 PTHR45883 PTHR45883:SF4 SM00028 SM00727 SSF48452 cd09857 cd14438 mobidb-lite	22
LotjaGi4g1v0216800_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tetratricopeptide repeat (TPR)-containing protein; TAIR: AT4G22670.1 HSP70-interacting protein 1; Swiss-Prot: sp\|Q93YR3\|F10AL_ARATH FAM10 family protein At4g22670; TrEMBL-Plants: tr\|V9VGV1\|V9VGV1_LOTJA HSP70 interaction protein; Found in the gene: LotjaGi4g1v0216800_LC	Domains Coil G3DSA:1.10.260.100 G3DSA:1.25.40.10 IPR006636 IPR011990 IPR013026 IPR019734 IPR034649 IPR041243 PF13181 PF17830 PF18253 PS50005 PS50293 PTHR45883 PTHR45883:SF4 SM00028 SM00727 SSF48452 cd09857 cd14438 mobidb-lite	22
LotjaGi4g1v0382400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Flap endonuclease 1; TAIR: AT1G29630.2 5'-3' exonuclease family protein; Swiss-Prot: sp\|Q60GC1\|EXO1_ORYSJ Exonuclease 1; TrEMBL-Plants: tr\|K7L667\|K7L667_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0382400	Domains G3DSA:1.10.150.20 G3DSA:3.40.50.1010 IPR006084 IPR006085 IPR006086 IPR008918 IPR019974 IPR029060 IPR032641 IPR036279 IPR037315 PF00752 PF00867 PR00853 PS00841 PTHR11081 PTHR11081:SF8 SM00279 SM00484 SM00485 SSF47807 SSF88723 cd09857 cd09908 mobidb-lite	25

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	16.67