Domain Predictions — View

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cd16932

Source: CDD

Description

HATPase_Phy-like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi5g1v0235100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phytochrome; TAIR: AT1G09570.3 phytochrome A; Swiss-Prot: sp\|P93673\|PHYA_LATSA Phytochrome type A; TrEMBL-Plants: tr\|N0DN12\|N0DN12_LOTJA Phytochrome; Found in the gene: LotjaGi5g1v0235100	Domains Coil G3DSA:1.10.287.130 G3DSA:3.30.450.20 G3DSA:3.30.450.270 G3DSA:3.30.450.40 G3DSA:3.30.565.10 IPR000014 IPR001294 IPR003018 IPR003594 IPR003661 IPR005467 IPR012129 IPR013515 IPR013516 IPR013654 IPR013767 IPR016132 IPR029016 IPR035965 IPR036890 IPR043150 PF00360 PF00989 PF01590 PF02518 PF08446 PIRSF000084 PR01033 PS00245 PS50046 PS50109 PS50112 PTHR43719 PTHR43719:SF46 SM00065 SM00091 SM00387 SM00388 SSF55781 SSF55785 SSF55874 TIGR00229 cd00082 cd00130 cd16932 mobidb-lite	47
LotjaGi5g1v0235100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phytochrome; TAIR: AT1G09570.3 phytochrome A; Swiss-Prot: sp\|P93673\|PHYA_LATSA Phytochrome type A; TrEMBL-Plants: tr\|N0DN12\|N0DN12_LOTJA Phytochrome; Found in the gene: LotjaGi5g1v0235100	Domains Coil G3DSA:1.10.287.130 G3DSA:3.30.450.20 G3DSA:3.30.450.270 G3DSA:3.30.450.40 G3DSA:3.30.565.10 IPR000014 IPR001294 IPR003018 IPR003594 IPR003661 IPR005467 IPR012129 IPR013515 IPR013516 IPR013654 IPR013767 IPR016132 IPR029016 IPR035965 IPR036890 IPR043150 PF00360 PF00989 PF01590 PF02518 PF08446 PIRSF000084 PR01033 PS00245 PS50046 PS50109 PS50112 PTHR43719 PTHR43719:SF46 SM00065 SM00091 SM00387 SM00388 SSF55781 SSF55785 SSF55874 TIGR00229 cd00082 cd00130 cd16932 mobidb-lite	47
LotjaGi5g1v0235100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phytochrome; TAIR: AT1G09570.3 phytochrome A; Swiss-Prot: sp\|P93673\|PHYA_LATSA Phytochrome type A; TrEMBL-Plants: tr\|N0DN12\|N0DN12_LOTJA Phytochrome; Found in the gene: LotjaGi5g1v0235100	Domains Coil G3DSA:1.10.287.130 G3DSA:3.30.450.20 G3DSA:3.30.450.270 G3DSA:3.30.450.40 G3DSA:3.30.565.10 IPR000014 IPR001294 IPR003018 IPR003594 IPR003661 IPR005467 IPR012129 IPR013515 IPR013516 IPR013654 IPR013767 IPR016132 IPR029016 IPR035965 IPR036890 IPR043150 PF00360 PF00989 PF01590 PF02518 PF08446 PIRSF000084 PR01033 PS00245 PS50046 PS50109 PS50112 PTHR43719 PTHR43719:SF46 SM00065 SM00091 SM00387 SM00388 SSF55781 SSF55785 SSF55874 TIGR00229 cd00082 cd00130 cd16932 mobidb-lite	47
LotjaGi5g1v0235100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phytochrome; TAIR: AT1G09570.3 phytochrome A; Swiss-Prot: sp\|P93673\|PHYA_LATSA Phytochrome type A; TrEMBL-Plants: tr\|N0DN12\|N0DN12_LOTJA Phytochrome; Found in the gene: LotjaGi5g1v0235100	Domains Coil G3DSA:1.10.287.130 G3DSA:3.30.450.20 G3DSA:3.30.450.270 G3DSA:3.30.450.40 G3DSA:3.30.565.10 IPR000014 IPR001294 IPR003018 IPR003594 IPR003661 IPR005467 IPR012129 IPR013515 IPR013516 IPR013654 IPR013767 IPR016132 IPR029016 IPR035965 IPR036890 IPR043150 PF00360 PF00989 PF01590 PF02518 PF08446 PIRSF000084 PR01033 PS00245 PS50046 PS50109 PS50112 PTHR43719 PTHR43719:SF46 SM00065 SM00091 SM00387 SM00388 SSF55781 SSF55785 SSF55874 TIGR00229 cd00082 cd00130 cd16932 mobidb-lite	47
LotjaGi6g1v0210900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phytochrome; TAIR: AT4G18130.1 phytochrome E; Swiss-Prot: sp\|P55004\|PHYE_IPONI Phytochrome E; TrEMBL-Plants: tr\|V7AY23\|V7AY23_PHAVU Phytochrome; Found in the gene: LotjaGi6g1v0210900	Domains G3DSA:3.30.450.20 G3DSA:3.30.450.270 G3DSA:3.30.450.40 G3DSA:3.30.565.10 IPR000014 IPR001294 IPR003018 IPR003594 IPR003661 IPR005467 IPR012129 IPR013515 IPR013654 IPR013767 IPR016132 IPR029016 IPR035965 IPR036890 IPR043150 PF00360 PF00512 PF00989 PF01590 PF02518 PF08446 PIRSF000084 PR01033 PS50046 PS50109 PS50112 PTHR43719 PTHR43719:SF17 SM00065 SM00091 SM00387 SM00388 SSF55781 SSF55785 SSF55874 TIGR00229 cd00082 cd00130 cd16932 mobidb-lite	44
LotjaGi6g1v0210900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phytochrome; TAIR: AT4G18130.1 phytochrome E; Swiss-Prot: sp\|P55004\|PHYE_IPONI Phytochrome E; TrEMBL-Plants: tr\|V7AY23\|V7AY23_PHAVU Phytochrome; Found in the gene: LotjaGi6g1v0210900	Domains G3DSA:3.30.450.20 G3DSA:3.30.450.270 G3DSA:3.30.450.40 G3DSA:3.30.565.10 IPR000014 IPR001294 IPR003018 IPR003594 IPR003661 IPR005467 IPR012129 IPR013515 IPR013654 IPR013767 IPR016132 IPR029016 IPR035965 IPR036890 IPR043150 PF00360 PF00512 PF00989 PF01590 PF02518 PF08446 PIRSF000084 PR01033 PS50046 PS50109 PS50112 PTHR43719 PTHR43719:SF17 SM00065 SM00091 SM00387 SM00388 SSF55781 SSF55785 SSF55874 TIGR00229 cd00082 cd00130 cd16932 mobidb-lite	44
LotjaGi6g1v0258900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phytochrome; TAIR: AT2G18790.1 phytochrome B; Swiss-Prot: sp\|P42499\|PHYB_SOYBN Phytochrome B; TrEMBL-Plants: tr\|A1IIA2\|A1IIA2_LOTJA Phytochrome; Found in the gene: LotjaGi6g1v0258900	Domains G3DSA:1.10.287.130 G3DSA:3.30.450.20 G3DSA:3.30.450.270 G3DSA:3.30.450.40 G3DSA:3.30.565.10 IPR000014 IPR001294 IPR003018 IPR003594 IPR003661 IPR005467 IPR012129 IPR013515 IPR013516 IPR013654 IPR013767 IPR016132 IPR029016 IPR035965 IPR036097 IPR036890 IPR043150 PF00360 PF00512 PF00989 PF01590 PF02518 PF08446 PIRSF000084 PR01033 PS00245 PS50046 PS50109 PS50112 PTHR43719 PTHR43719:SF12 SM00065 SM00091 SM00387 SM00388 SSF47384 SSF55781 SSF55785 SSF55874 TIGR00229 cd00082 cd00130 cd16932 mobidb-lite	49

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29