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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0357200 |
| Transcript ID | LotjaGi5g1v0357200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent RNA helicase, putative; TAIR: AT5G10370.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein; Swiss-Prot: sp|F4KGU4|DEAHC_ARATH ATP-dependent RNA helicase DEAH12, chloroplastic; TrEMBL-Plants: tr|G7J375|G7J375_MEDTR Helicase, IBR and zinc finger protein; Found in the gene: LotjaGi5g1v0357200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67173148..67179273) extracted from Lotus japonicus Gifu genome v1.2.
AAAATATTTATTTATAAATAATTTTGATACTCATAAGAATTAGATTGTTCTAGAGTCAGAGAAAAGTGAGTGACAGAAGT GAGAAGTGGAGAAGACCAACAGACTCAGAAGAGAAGAAAAAACACACACACACACACACAAAACACACACACACTTCACC AATTAGGGTTTCGTCATGAGGAAAACCACTCACCCCGATTTCAACCGTCAACCACCGCACTTCCGGTGGAAGCCCGGATT CCACCGCCTCGACCGTCCTCCGGAGCGTCTCCGCGCTCCCAATTTCGTCGTCGATCTCTGCTTCCTGCGCCTCCGCCACG GCCTCCGCCGTGACGACGTCGACTCTCTCATCACCCGCTGCATTCCCAGGCCGGAGAATTTCACCTTCTACCCCTGCGAC CGTGTCGCTGCCTCCCTCAATTTCCAGCAGTGGACGGACGCACGTGACGCCGTCGTCTGCCTATGGGAGTCGCGCCTCTC TGGCGCCCATGATTTCACGCCGGAACTCTCCTCCAATGTCCTACTACCCTCCGACAGGGTCGAGCTCGAAGCTCGCCTCC GATCCCTCTTCGCCAGCCACGTGAGGGGGTTGATGGATGGCAAGGAGGTGAAGCGATGGGTGGAGGAGAGGGACAAGTTG TCCAAAGAGATTGCTCACGTCGCAAAGTCGCTGCGTACCCCGTTGCCAATTGGCGTGCTCGAACAGCAGCGACACAAGAG GAATGGGCTTGAGGTTGAGAAGGATTTGGTTGAAAGGAGAATTAAGGAGTTCCAGTGCGCAATGCGGTGCATATTGCAGT ATCTGGAGGAGGAGGAGGAAGGTGAAGAAGATTTTGTCCCTATATTCAGGTTTGATGGAAGTAGTTTGGACTGGAAGCAC ATTCAAAGCCTCATCATCAGGGAACGTCGCAGGCTCGAAGAAGGATTGCCCATTTATGCATACCGGAGGGATATTCTTCG CGAAATACATCATCAACAGGTGATCGAATTTTGGACTTTAATTTCAATTTAATAAATTTCCAAACTATAATGTATGCTTC TTTTAAGTTGGTTTAATTTCAATTTAATAAATTTCCAAACTATAATGTATGTTTATTTGAAGTTGGTTTAATGTTTCTAG TGCATATACAGATAATGGTATTGATTGGAGAGACCGGTTCGGGCAAGAGTACACAGTTGGTGCAGTTTCTTGCTGATTCG GGCATTGGTGCTGATGAGTGCATTGTGTGCACCCAGCCTCGCAAGATTGCTGCCAAATCATTGACCCAAAGGGTCCAGGA AGAAAGCAGCGGGTGTTATGGTGGTGACAACGCAATCAAGTGTTATTCCATGTTTTCATCCTCGCACGAGTTTGATTCCA AGATAACATTCATGACAGATCACTGTTTATTGCAGCACTACATGAGTGATAAGAATTTGTTTGGGGTCTCGTGTATCGTA ATTGATGAGGCTCATGAAAGGAGCTTAAATACTGATCTACTGTTGTCGCTAATAAAGAATTTACTTTGTAGGAGGGTTGA AATGCGGCTTATCATTATGTCTGCTACAGCTGATGCCAAGCAGCTATCTGATTACTTTTATGGTTGTGGAATTTTTGGTG TCCGTGGGAGAAAATTTCCTGTGGAGGTGAGATATGCTCCTTCTGATGCAGGGTATTCTTCTTCTGCTGTTGTGGCCTCA TATGTTTACGATGTCGTCAGAATGGCAACTGAGATTCACAAAAGAGAGAAAGAGGGAACTATTCTTGCCTTTTTGACCTC ACAGGCAGAAGTGGAATGGGCCTGTGAAAAATTTACAGCTCTCTCTGCTGTTGCTTTGCCCTTACATGGGAAACTTTCAT CTGAGGAGCAATTTCATGTTTTCCAGAGCTTCCCTGGAAAAAGAAAAGTGATATTTTCAACAAATCTTGCAGAGACGTCC CTTACAATTCCTGGTGTTAAGTATGTAATAGATTCTGGGTTGGTAAAAGACAGTCGATTCGATCCTAACAGTGGCATGAA TGTACTTAAGGTTAGCTGGATCACCAAGAGCTCTGCTGATCAGCGGGCTGGTCGTGCTGGGAGGACTGAGCCTGGTAAGT GTTATAGGCTGTATTCAGAAGCTGACTATCAGTCTATGGAACTAAATCAAGAACCGGAGATTCGAAGAGTTCATCTCGGT GTAGCAGTTTTGAGAATCCTTGCTTTAGGAGTTAATAATGTGCAGGATTTTGATTTTGTGGATGCTCCAAGTCCTAGTTC TATTGAGATGGCGATCAGGAATCTAATTCAATTAGGAGTGATTAAACTGAACAATAATTTTCATGAATTAACTGATGAAG GTAGATGCTTGGTAAAAATGGGGATCGAACCAAGACTTGGTAAACTTATTCTTGGCTGTTCCGGACATTGTTTGCGTAGA GAAGGCATTGCCCTTGCTGCTATGATGACCAATGCCAGTAGCATATTTTGCAGAGTTGGTAATGAAGGTGATAAACAGAG ATCTGATTGCCACAAAGTGCAATTTTGCCATCGTGATGGTGACCTCTTTACTCTTCTGTCTGTGTACATGGAATGGGAAG CTTTGCCTACAGAGAGGAAGAATAAATGGTGTTGGGAAAACAGCATCAATGCCAAATCTATGAGGAGATGCCATGACACA TATTTGGAGTTAGTATCTTGTCTTGAGCGTGAACTTAGCTTTTTCACTCCATCTTACTGGCGATGGGACCCTTATAAACC CTCTTTTCATGATACGAATATGAAAAAGGTTATACTCTCCTCACTTGCTGAGAATGTGGCCACGTACTCTGGATGCAATC AACTTGGTTATGAAGTCGCACAAACGGGGAGATGTGTCCAACTACATCCGTCTTGTTCCTTGCTTGTATTTGCTGAGAGA CCTGGTTGGGTGGTTTTTGGCGAGCTTCTTTCAGTTTCTAATGAATATTTGGTCTGTGTAAGTGCTTTTGACTTTCAATC GTTGCATGACCTTTGCCCTCGTCCCTTGTTTGATGTATCCAAGATGGAAGAACGGAAGTTGCAAATGAAGACATTGACTG GTTTTGGCACTATTCTTCTCAGGAGATTTTGTGGGAAAGCCAACAGTAATTTGCTTGGTCTTGTTTCACGGATAAGGAAA GCTTGTATGGATGAACGTATCTTCATTCAAGTGAATGTTGACCAGCATGATGCCCAGTTATATGCCACTTCACATGATAT GAATACAGCCCTTAGGTTGGTTGATGATGTTTTAGAATGTGAGAAAAAGTGGCTACGTGCTGAATGTATGGAAAAATGCT TGTATCATGGGTCTGGTTTCTCACCACCTGTAGCTTTATTCGGGTCTGGTGCTGAGATAAAGCATTTGGAACTTGACAAA CGTTCCTTGAGTGTTGACGTGTATCACCCAAACGTAAGTGCAATTGACGACAAAGAGCTCTTGATGTTTTTTGAGAAGAA TACCTCATGTTGTATCTGTTCTGTGCACAAGTTCACAGGCATGGCAAAGGATGTTGAGGATGGCGAAAAGTGGGGCAGGA TAACATTTCTGTCCCCTGATGCTGCCAAAAGAGCTGCTGAGTTGGATGGAGAGGAGTTCTCTGGCTCGTCCTTGAAAATT GTTACTTCACAATCTGCTACTGGAGGGAGTAAACCATTTTCATTTCCTGCCGTAAAAGCAAAAATTTACTGGCCTCGTAG GCTTAGCAAAGGAGTTGCCATAGTTAAATGTGATATACAGGATGTCAGATTCATCATTACAGAGTTTTATAACCTTGCTA TTGGAGGAAGGTATGTTCGATGTCAAATTAGCAACAAGTATGCGGACAGTGTTGTGATAAGTGGGTTTGCCAAAGAGCTT TCAGAAGGTGAAGTTTTTGATGTAATAAGAACTGCTACAAGTAGAAGGATTTTGGATTTTTTCTTGGTGAGAGGAGAGGC AGTTGGAAATCCACCATGCAGTGCTTGTGAAGAGGCACTTCTTAAAGCAATTTCCCCCTTAATGCCCAAAAGGAACCCCC ACATTGGCTCTTGTCGAGTTCAGGTGTTTCCACCTGAGCAGAAGGATGCTTTCATGAGAGCTTTAATCACTTTCGATGGA AGATTACATTTAGAGGCCGCAAAAGCTTTGGAGACAATTGAAGGAACGGTGTTGCCCGGATTTCTTTCATGGCAGAAGAT AAACTGCCAGCAGTTGTTCAATAGCTCCTTGACATTTCCTCATCCAGTGTATCGCGTGATTAAGGAACAACTGGACAAAG TACTTGCAAGCTTCAACAATCTAAAGGGTACTTTATTGTTTTGCTCCTTTTCCTTTGCAGATGGTTGTGATTCATTTTTT GATGCCCTTTTTAAAAGGCTAAGATGCATTTACTTACATTATACATGGCTGAAACCTAATGTTTTTAAACAAATTGTTGC TTTTTCCGTACCCTGTTTTTTAATTCACGACACTATGTAGATGAGTTTCATAAAATTTCGAATTGATCAATGGTTATTAT TTGGAAGCTTTCTCAAGCTATGAGACACCTTAATTTCTTTATTTTCTTCCAAGTTTTTCATTTTCAATTTAATTACTGAC AATCATTCGTCTTCTTAAGGTCTTGAGTGGAACCTAGACAAGATTGCTAATGGTTGCCACCGAGTGAGGATAACAGCCAA TGCCACAAAGACAGTTGCAGAAGTTAGGAGACCTCTGGAAGAACTTTCCAGAGGGAAAACAATAGAGCACAACAGCCTCA ACCCTGCAGTTCTAGAGCTCATGTGTTCCAGAGACGGCTTCAGTCTTAGAAGCTCAATACAACAAGAGACAGGAACTTAC ATTCTTTTTGACAGGCACAACCAGAATTTACGGATTTTTGGTTCTCCGGATAAGATTGATTGGGCTCAGCAGAAGCTGAT TCAATCCCTACTCTCTCTCCACGAAGGAAGGCAGTTGGTAATCCATCTGAGAGGGAGGGATCTACCTCCGGACTTAATGA AGCAAGTGGTTAAGAATTTTGGGCCAGATCTCCATGGACTAAAGCAGAAGGTACCTGGGGTAGATCTTAACCTCAACACT CGCAGCCAACAAATATTTCTTCATGGTAACAAGGAGTTGAAACCAAGAGTAGAGGAAGCAATTCTTGAGATTGCACGTTC AAGTAATGATTTGGTTAAGAGACATGACACCGGACCTAGCTGCCCAATTTGCTTATGTGAAGTTGAGGATGGATACCAAC TTGAAGGCTGTGGTCATTTGTTCTGCCGTTTGTGTCTTGTGGAGCAATGTGAATCAGCTATAAAAAACCAAGGAATTTTC CCAATATGTTGTTCTCAGGAGGGCTGTGGAGATCCTATTCTGCTTACAGATTTGAGATCTTTCTTATTAAATGATAAGCT GGAGGAACTTTTCAGGGCTTCTTTGGGTGCTTTTGTGGTCGCGAGTGGGGGAACTTACCGGTTCTGCCCCTCTCCTGACT GCCCCTCAATTTATCGAGTTGTGGATCCGGACACCGGTGGTGAGCCCTTTGTTTGTGGGGCGTGTTATTCAGAGACTTGT ACCAGGTGCCATGTAGAGTATCATCCATACCTTTCATGCGAGAGATATAAAGAATTCAAGGAAGATCCGGACTTATCTCT GAAGGAGTGGTGCAAAGGGAAAGAACAAGTTAAGAGCTGTTCGGCCTGTGGGTATGTAATTGAGAAGGTAGATGGCTGCA ATCACGTTGAGTGCAAGTGTGGAAAGCATGTCTGCTGGGTTTGCTTGGAGATCTTTTTGAGCAGTGATGAATGTTATAAC CATTTAAGAACTATACACTTGGCCATCATCTAGATTGCCATTTGTGTACTAATTTAGAAATTAAGTGTAGTATAGTGGTG TGCATATTATATAGATAGGCCTCAGAAGATGTGCAGCTTATTCATAATTTAATGTACATATAATAGCTCTCGTGGATTAT CCAGTTGTGCACGAGGTTATCCTATATAAGTCTCTGTAAATTGTGTCGTAAAAACTTGGTTGTGTTTTCTGGGCAATCAT ATTAAGTTTATGACTAATACTCGTTTGGCACAAAGGAATATATGTATGGTTGGTTACAAATTACATTAGAGTATAAATTT AAAGCAAAAATTTGTATATGCAGATTTTGTTTCATGTATCAACTCA
CDS sequence (LotjaGi5g1v0357200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGAAAACCACTCACCCCGATTTCAACCGTCAACCACCGCACTTCCGGTGGAAGCCCGGATTCCACCGCCTCGACCG TCCTCCGGAGCGTCTCCGCGCTCCCAATTTCGTCGTCGATCTCTGCTTCCTGCGCCTCCGCCACGGCCTCCGCCGTGACG ACGTCGACTCTCTCATCACCCGCTGCATTCCCAGGCCGGAGAATTTCACCTTCTACCCCTGCGACCGTGTCGCTGCCTCC CTCAATTTCCAGCAGTGGACGGACGCACGTGACGCCGTCGTCTGCCTATGGGAGTCGCGCCTCTCTGGCGCCCATGATTT CACGCCGGAACTCTCCTCCAATGTCCTACTACCCTCCGACAGGGTCGAGCTCGAAGCTCGCCTCCGATCCCTCTTCGCCA GCCACGTGAGGGGGTTGATGGATGGCAAGGAGGTGAAGCGATGGGTGGAGGAGAGGGACAAGTTGTCCAAAGAGATTGCT CACGTCGCAAAGTCGCTGCGTACCCCGTTGCCAATTGGCGTGCTCGAACAGCAGCGACACAAGAGGAATGGGCTTGAGGT TGAGAAGGATTTGGTTGAAAGGAGAATTAAGGAGTTCCAGTGCGCAATGCGGTGCATATTGCAGTATCTGGAGGAGGAGG AGGAAGGTGAAGAAGATTTTGTCCCTATATTCAGGTTTGATGGAAGTAGTTTGGACTGGAAGCACATTCAAAGCCTCATC ATCAGGGAACGTCGCAGGCTCGAAGAAGGATTGCCCATTTATGCATACCGGAGGGATATTCTTCGCGAAATACATCATCA ACAGATAATGGTATTGATTGGAGAGACCGGTTCGGGCAAGAGTACACAGTTGGTGCAGTTTCTTGCTGATTCGGGCATTG GTGCTGATGAGTGCATTGTGTGCACCCAGCCTCGCAAGATTGCTGCCAAATCATTGACCCAAAGGGTCCAGGAAGAAAGC AGCGGGTGTTATGGTGGTGACAACGCAATCAAGTGTTATTCCATGTTTTCATCCTCGCACGAGTTTGATTCCAAGATAAC ATTCATGACAGATCACTGTTTATTGCAGCACTACATGAGTGATAAGAATTTGTTTGGGGTCTCGTGTATCGTAATTGATG AGGCTCATGAAAGGAGCTTAAATACTGATCTACTGTTGTCGCTAATAAAGAATTTACTTTGTAGGAGGGTTGAAATGCGG CTTATCATTATGTCTGCTACAGCTGATGCCAAGCAGCTATCTGATTACTTTTATGGTTGTGGAATTTTTGGTGTCCGTGG GAGAAAATTTCCTGTGGAGGTGAGATATGCTCCTTCTGATGCAGGGTATTCTTCTTCTGCTGTTGTGGCCTCATATGTTT ACGATGTCGTCAGAATGGCAACTGAGATTCACAAAAGAGAGAAAGAGGGAACTATTCTTGCCTTTTTGACCTCACAGGCA GAAGTGGAATGGGCCTGTGAAAAATTTACAGCTCTCTCTGCTGTTGCTTTGCCCTTACATGGGAAACTTTCATCTGAGGA GCAATTTCATGTTTTCCAGAGCTTCCCTGGAAAAAGAAAAGTGATATTTTCAACAAATCTTGCAGAGACGTCCCTTACAA TTCCTGGTGTTAAGTATGTAATAGATTCTGGGTTGGTAAAAGACAGTCGATTCGATCCTAACAGTGGCATGAATGTACTT AAGGTTAGCTGGATCACCAAGAGCTCTGCTGATCAGCGGGCTGGTCGTGCTGGGAGGACTGAGCCTGGTAAGTGTTATAG GCTGTATTCAGAAGCTGACTATCAGTCTATGGAACTAAATCAAGAACCGGAGATTCGAAGAGTTCATCTCGGTGTAGCAG TTTTGAGAATCCTTGCTTTAGGAGTTAATAATGTGCAGGATTTTGATTTTGTGGATGCTCCAAGTCCTAGTTCTATTGAG ATGGCGATCAGGAATCTAATTCAATTAGGAGTGATTAAACTGAACAATAATTTTCATGAATTAACTGATGAAGGTAGATG CTTGGTAAAAATGGGGATCGAACCAAGACTTGGTAAACTTATTCTTGGCTGTTCCGGACATTGTTTGCGTAGAGAAGGCA TTGCCCTTGCTGCTATGATGACCAATGCCAGTAGCATATTTTGCAGAGTTGGTAATGAAGGTGATAAACAGAGATCTGAT TGCCACAAAGTGCAATTTTGCCATCGTGATGGTGACCTCTTTACTCTTCTGTCTGTGTACATGGAATGGGAAGCTTTGCC TACAGAGAGGAAGAATAAATGGTGTTGGGAAAACAGCATCAATGCCAAATCTATGAGGAGATGCCATGACACATATTTGG AGTTAGTATCTTGTCTTGAGCGTGAACTTAGCTTTTTCACTCCATCTTACTGGCGATGGGACCCTTATAAACCCTCTTTT CATGATACGAATATGAAAAAGGTTATACTCTCCTCACTTGCTGAGAATGTGGCCACGTACTCTGGATGCAATCAACTTGG TTATGAAGTCGCACAAACGGGGAGATGTGTCCAACTACATCCGTCTTGTTCCTTGCTTGTATTTGCTGAGAGACCTGGTT GGGTGGTTTTTGGCGAGCTTCTTTCAGTTTCTAATGAATATTTGGTCTGTGTAAGTGCTTTTGACTTTCAATCGTTGCAT GACCTTTGCCCTCGTCCCTTGTTTGATGTATCCAAGATGGAAGAACGGAAGTTGCAAATGAAGACATTGACTGGTTTTGG CACTATTCTTCTCAGGAGATTTTGTGGGAAAGCCAACAGTAATTTGCTTGGTCTTGTTTCACGGATAAGGAAAGCTTGTA TGGATGAACGTATCTTCATTCAAGTGAATGTTGACCAGCATGATGCCCAGTTATATGCCACTTCACATGATATGAATACA GCCCTTAGGTTGGTTGATGATGTTTTAGAATGTGAGAAAAAGTGGCTACGTGCTGAATGTATGGAAAAATGCTTGTATCA TGGGTCTGGTTTCTCACCACCTGTAGCTTTATTCGGGTCTGGTGCTGAGATAAAGCATTTGGAACTTGACAAACGTTCCT TGAGTGTTGACGTGTATCACCCAAACGTAAGTGCAATTGACGACAAAGAGCTCTTGATGTTTTTTGAGAAGAATACCTCA TGTTGTATCTGTTCTGTGCACAAGTTCACAGGCATGGCAAAGGATGTTGAGGATGGCGAAAAGTGGGGCAGGATAACATT TCTGTCCCCTGATGCTGCCAAAAGAGCTGCTGAGTTGGATGGAGAGGAGTTCTCTGGCTCGTCCTTGAAAATTGTTACTT CACAATCTGCTACTGGAGGGAGTAAACCATTTTCATTTCCTGCCGTAAAAGCAAAAATTTACTGGCCTCGTAGGCTTAGC AAAGGAGTTGCCATAGTTAAATGTGATATACAGGATGTCAGATTCATCATTACAGAGTTTTATAACCTTGCTATTGGAGG AAGGTATGTTCGATGTCAAATTAGCAACAAGTATGCGGACAGTGTTGTGATAAGTGGGTTTGCCAAAGAGCTTTCAGAAG GTGAAGTTTTTGATGTAATAAGAACTGCTACAAGTAGAAGGATTTTGGATTTTTTCTTGGTGAGAGGAGAGGCAGTTGGA AATCCACCATGCAGTGCTTGTGAAGAGGCACTTCTTAAAGCAATTTCCCCCTTAATGCCCAAAAGGAACCCCCACATTGG CTCTTGTCGAGTTCAGGTGTTTCCACCTGAGCAGAAGGATGCTTTCATGAGAGCTTTAATCACTTTCGATGGAAGATTAC ATTTAGAGGCCGCAAAAGCTTTGGAGACAATTGAAGGAACGGTGTTGCCCGGATTTCTTTCATGGCAGAAGATAAACTGC CAGCAGTTGTTCAATAGCTCCTTGACATTTCCTCATCCAGTGTATCGCGTGATTAAGGAACAACTGGACAAAGTACTTGC AAGCTTCAACAATCTAAAGGGTCTTGAGTGGAACCTAGACAAGATTGCTAATGGTTGCCACCGAGTGAGGATAACAGCCA ATGCCACAAAGACAGTTGCAGAAGTTAGGAGACCTCTGGAAGAACTTTCCAGAGGGAAAACAATAGAGCACAACAGCCTC AACCCTGCAGTTCTAGAGCTCATGTGTTCCAGAGACGGCTTCAGTCTTAGAAGCTCAATACAACAAGAGACAGGAACTTA CATTCTTTTTGACAGGCACAACCAGAATTTACGGATTTTTGGTTCTCCGGATAAGATTGATTGGGCTCAGCAGAAGCTGA TTCAATCCCTACTCTCTCTCCACGAAGGAAGGCAGTTGGTAATCCATCTGAGAGGGAGGGATCTACCTCCGGACTTAATG AAGCAAGTGGTTAAGAATTTTGGGCCAGATCTCCATGGACTAAAGCAGAAGGTACCTGGGGTAGATCTTAACCTCAACAC TCGCAGCCAACAAATATTTCTTCATGGTAACAAGGAGTTGAAACCAAGAGTAGAGGAAGCAATTCTTGAGATTGCACGTT CAAGTAATGATTTGGTTAAGAGACATGACACCGGACCTAGCTGCCCAATTTGCTTATGTGAAGTTGAGGATGGATACCAA CTTGAAGGCTGTGGTCATTTGTTCTGCCGTTTGTGTCTTGTGGAGCAATGTGAATCAGCTATAAAAAACCAAGGAATTTT CCCAATATGTTGTTCTCAGGAGGGCTGTGGAGATCCTATTCTGCTTACAGATTTGAGATCTTTCTTATTAAATGATAAGC TGGAGGAACTTTTCAGGGCTTCTTTGGGTGCTTTTGTGGTCGCGAGTGGGGGAACTTACCGGTTCTGCCCCTCTCCTGAC TGCCCCTCAATTTATCGAGTTGTGGATCCGGACACCGGTGGTGAGCCCTTTGTTTGTGGGGCGTGTTATTCAGAGACTTG TACCAGGTGCCATGTAGAGTATCATCCATACCTTTCATGCGAGAGATATAAAGAATTCAAGGAAGATCCGGACTTATCTC TGAAGGAGTGGTGCAAAGGGAAAGAACAAGTTAAGAGCTGTTCGGCCTGTGGGTATGTAATTGAGAAGGTAGATGGCTGC AATCACGTTGAGTGCAAGTGTGGAAAGCATGTCTGCTGGGTTTGCTTGGAGATCTTTTTGAGCAGTGATGAATGTTATAA CCATTTAAGAACTATACACTTGGCCATCATCTAG
Protein sequence (LotjaGi5g1v0357200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRKTTHPDFNRQPPHFRWKPGFHRLDRPPERLRAPNFVVDLCFLRLRHGLRRDDVDSLITRCIPRPENFTFYPCDRVAAS LNFQQWTDARDAVVCLWESRLSGAHDFTPELSSNVLLPSDRVELEARLRSLFASHVRGLMDGKEVKRWVEERDKLSKEIA HVAKSLRTPLPIGVLEQQRHKRNGLEVEKDLVERRIKEFQCAMRCILQYLEEEEEGEEDFVPIFRFDGSSLDWKHIQSLI IRERRRLEEGLPIYAYRRDILREIHHQQIMVLIGETGSGKSTQLVQFLADSGIGADECIVCTQPRKIAAKSLTQRVQEES SGCYGGDNAIKCYSMFSSSHEFDSKITFMTDHCLLQHYMSDKNLFGVSCIVIDEAHERSLNTDLLLSLIKNLLCRRVEMR LIIMSATADAKQLSDYFYGCGIFGVRGRKFPVEVRYAPSDAGYSSSAVVASYVYDVVRMATEIHKREKEGTILAFLTSQA EVEWACEKFTALSAVALPLHGKLSSEEQFHVFQSFPGKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPNSGMNVL KVSWITKSSADQRAGRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVNNVQDFDFVDAPSPSSIE MAIRNLIQLGVIKLNNNFHELTDEGRCLVKMGIEPRLGKLILGCSGHCLRREGIALAAMMTNASSIFCRVGNEGDKQRSD CHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYLELVSCLERELSFFTPSYWRWDPYKPSF HDTNMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFDFQSLH DLCPRPLFDVSKMEERKLQMKTLTGFGTILLRRFCGKANSNLLGLVSRIRKACMDERIFIQVNVDQHDAQLYATSHDMNT ALRLVDDVLECEKKWLRAECMEKCLYHGSGFSPPVALFGSGAEIKHLELDKRSLSVDVYHPNVSAIDDKELLMFFEKNTS CCICSVHKFTGMAKDVEDGEKWGRITFLSPDAAKRAAELDGEEFSGSSLKIVTSQSATGGSKPFSFPAVKAKIYWPRRLS KGVAIVKCDIQDVRFIITEFYNLAIGGRYVRCQISNKYADSVVISGFAKELSEGEVFDVIRTATSRRILDFFLVRGEAVG NPPCSACEEALLKAISPLMPKRNPHIGSCRVQVFPPEQKDAFMRALITFDGRLHLEAAKALETIEGTVLPGFLSWQKINC QQLFNSSLTFPHPVYRVIKEQLDKVLASFNNLKGLEWNLDKIANGCHRVRITANATKTVAEVRRPLEELSRGKTIEHNSL NPAVLELMCSRDGFSLRSSIQQETGTYILFDRHNQNLRIFGSPDKIDWAQQKLIQSLLSLHEGRQLVIHLRGRDLPPDLM KQVVKNFGPDLHGLKQKVPGVDLNLNTRSQQIFLHGNKELKPRVEEAILEIARSSNDLVKRHDTGPSCPICLCEVEDGYQ LEGCGHLFCRLCLVEQCESAIKNQGIFPICCSQEGCGDPILLTDLRSFLLNDKLEELFRASLGAFVVASGGTYRFCPSPD CPSIYRVVDPDTGGEPFVCGACYSETCTRCHVEYHPYLSCERYKEFKEDPDLSLKEWCKGKEQVKSCSACGYVIEKVDGC NHVECKCGKHVCWVCLEIFLSSDECYNHLRTIHLAII
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 52 | 1565 | 1514 | 0.0 | – | |
| PANTHER | 52 | 1565 | 1514 | 0.0 | – | |
| Coils | 175 | 202 | 28 | - | – | |
| Gene3D | 234 | 428 | 195 | 2.1E-59 | – | |
| SUPERFAMILY | 246 | 792 | 547 | 3.74E-69 | ||
| SMART | 249 | 435 | 187 | 1.8E-23 | ||
| Pfam | 259 | 413 | 155 | 1.7E-6 | ||
| ProSiteProfiles | 261 | 426 | 166 | 15.709 | ||
| CDD | 268 | 425 | 158 | 7.97793E-52 | – | |
| ProSitePatterns | 368 | 377 | 10 | - | ||
| Gene3D | 429 | 600 | 172 | 3.1E-58 | – | |
| CDD | 430 | 589 | 160 | 2.03289E-65 | – | |
| ProSiteProfiles | 455 | 621 | 167 | 16.823 | ||
| Pfam | 462 | 580 | 119 | 8.6E-17 | ||
| SMART | 483 | 581 | 99 | 7.9E-20 | ||
| Gene3D | 602 | 647 | 46 | 3.6E-9 | ||
| SMART | 641 | 737 | 97 | 1.1E-10 | ||
| Pfam | 642 | 736 | 95 | 5.4E-9 | ||
| Pfam | 806 | 884 | 79 | 3.8E-7 | ||
| Gene3D | 1504 | 1584 | 81 | 1.0E-8 | ||
| ProSiteProfiles | 1504 | 1712 | 209 | 25.358 | – | |
| SUPERFAMILY | 1507 | 1572 | 66 | 1.55E-7 | – | |
| ProSiteProfiles | 1508 | 1550 | 43 | 8.89 | ||
| ProSitePatterns | 1524 | 1533 | 10 | - | ||
| SMART | 1576 | 1640 | 65 | 8.7E-11 | ||
| Pfam | 1587 | 1640 | 54 | 2.7E-8 | ||
| SUPERFAMILY | 1587 | 1646 | 60 | 6.36E-7 | – | |
| SMART | 1641 | 1705 | 65 | 0.03 | ||
| Gene3D | 1646 | 1712 | 67 | 7.2E-9 | – | |
| SUPERFAMILY | 1662 | 1710 | 49 | 1.65E-9 | – | |
| ProSitePatterns | 1692 | 1713 | 22 | - | ||
| Coils | 1717 | 1717 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Helicase activity | Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi5g1v0357200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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