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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0222689 |
| Transcript ID | Lj0g3v0222689.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter C family member 10-like [Cicer arietinum] gi|502119079|ref|XP_004496497.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 903 | 903 | 0 | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| PANTHER | 1 | 903 | 903 | 0 | – | |
| SignalP | 1 | 20 | 20 | – | – | |
| Phobius | 1 | 20 | 20 | – | – | |
| Phobius | 3 | 14 | 12 | – | – | |
| Phobius | 15 | 20 | 6 | – | – | |
| Phobius | 21 | 374 | 354 | – | – | |
| SUPERFAMILY | 76 | 307 | 232 | 7.21E-56 | ||
| CDD | 84 | 284 | 201 | 5.92E-103 | – | |
| ProSiteProfiles | 86 | 307 | 222 | 22.849 | ||
| Gene3D | 90 | 313 | 224 | 6.00E-66 | ||
| Pfam | 102 | 236 | 135 | 9.20E-24 | ||
| SMART | 111 | 284 | 174 | 1.10E-17 | ||
| ProSitePatterns | 209 | 223 | 15 | – | ||
| SUPERFAMILY | 367 | 673 | 307 | 1.09E-44 | ||
| TMHMM | 375 | 394 | 20 | – | – | |
| Phobius | 375 | 394 | 20 | – | – | |
| Gene3D | 379 | 671 | 293 | 2.50E-50 | – | |
| ProSiteProfiles | 381 | 656 | 276 | 26.256 | ||
| Pfam | 390 | 635 | 246 | 3.20E-23 | ||
| Phobius | 395 | 414 | 20 | – | – | |
| TMHMM | 414 | 436 | 23 | – | – | |
| Phobius | 415 | 441 | 27 | – | – | |
| Phobius | 442 | 503 | 62 | – | – | |
| Phobius | 504 | 526 | 23 | – | – | |
| TMHMM | 504 | 526 | 23 | – | – | |
| Phobius | 527 | 603 | 77 | – | – | |
| Phobius | 604 | 623 | 20 | – | – | |
| TMHMM | 608 | 630 | 23 | – | – | |
| Phobius | 624 | 642 | 19 | – | – | |
| Phobius | 643 | 659 | 17 | – | – | |
| Phobius | 660 | 910 | 251 | – | – | |
| SUPERFAMILY | 683 | 904 | 222 | 9.95E-60 | ||
| CDD | 691 | 903 | 213 | 8.06E-120 | – | |
| Gene3D | 692 | 904 | 213 | 2.20E-57 | ||
| ProSiteProfiles | 693 | 909 | 217 | 12.732 | ||
| Pfam | 710 | 857 | 148 | 8.30E-29 | ||
| SMART | 719 | 902 | 184 | 7.30E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0222689.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0222689.1, powered by CORGI.
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