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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0304749 |
| Transcript ID | Lj0g3v0304749.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter B family member 2-like [Glycine max] gi|356497653|ref|XP_003517674.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| TMHMM | 12 | 34 | 23 | – | – | |
| Phobius | 12 | 35 | 24 | – | – | |
| Phobius | 36 | 422 | 387 | – | – | |
| SUPERFAMILY | 105 | 349 | 245 | 8.48E-86 | ||
| Gene3D | 110 | 342 | 233 | 1.50E-83 | ||
| ProSiteProfiles | 111 | 347 | 237 | 25.75 | ||
| CDD | 111 | 349 | 239 | 6.42E-136 | – | |
| Pfam | 129 | 278 | 150 | 1.40E-33 | ||
| SMART | 138 | 330 | 193 | 1.30E-16 | ||
| PANTHER | 244 | 937 | 694 | 0 | – | |
| PANTHER | 244 | 937 | 694 | 0 | – | |
| ProSitePatterns | 250 | 264 | 15 | – | ||
| SUPERFAMILY | 414 | 727 | 314 | 3.53E-47 | ||
| Gene3D | 414 | 727 | 314 | 5.80E-40 | – | |
| Phobius | 423 | 456 | 34 | – | – | |
| TMHMM | 425 | 447 | 23 | – | – | |
| ProSiteProfiles | 427 | 713 | 287 | 37.558 | ||
| Pfam | 428 | 699 | 272 | 7.00E-48 | ||
| Phobius | 457 | 467 | 11 | – | – | |
| TMHMM | 468 | 490 | 23 | – | – | |
| Phobius | 468 | 485 | 18 | – | – | |
| Phobius | 486 | 554 | 69 | – | – | |
| TMHMM | 548 | 570 | 23 | – | – | |
| Phobius | 555 | 582 | 28 | – | – | |
| Phobius | 583 | 649 | 67 | – | – | |
| TMHMM | 650 | 672 | 23 | – | – | |
| Phobius | 650 | 671 | 22 | – | – | |
| Phobius | 672 | 690 | 19 | – | – | |
| TMHMM | 687 | 709 | 23 | – | – | |
| Phobius | 691 | 708 | 18 | – | – | |
| Phobius | 709 | 937 | 229 | – | – | |
| SUPERFAMILY | 739 | 937 | 199 | 2.88E-73 | ||
| Gene3D | 745 | 937 | 193 | 2.20E-71 | ||
| ProSiteProfiles | 746 | 937 | 192 | 15.406 | ||
| Pfam | 765 | 913 | 149 | 1.90E-36 | ||
| SMART | 773 | 937 | 165 | 1.10E-10 | ||
| ProSitePatterns | 885 | 899 | 15 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0304749.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0304749.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.