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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0052210 |
| Transcript ID | Lj1g3v0052210.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: serine/threonine-protein kinase TOR-like isoform 1 [Glycine max] gi|356539702|ref|XP_003538334.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 20 | 1469 | 1450 | 0 | – | |
| PANTHER | 20 | 1469 | 1450 | 0 | ||
| Gene3D | 40 | 126 | 87 | 3.70E-84 | ||
| SUPERFAMILY | 49 | 458 | 410 | 7.33E-29 | ||
| Gene3D | 167 | 459 | 293 | 3.70E-84 | ||
| SUPERFAMILY | 347 | 1165 | 819 | 5.24E-116 | ||
| Gene3D | 583 | 820 | 238 | 3.70E-84 | ||
| Pfam | 765 | 933 | 169 | 8.70E-52 | ||
| SMART | 765 | 933 | 169 | 5.50E-76 | ||
| Gene3D | 855 | 1125 | 271 | 6.20E-32 | ||
| SUPERFAMILY | 1202 | 1431 | 230 | 5.24E-116 | ||
| ProSiteProfiles | 1302 | 1883 | 582 | 62.344 | ||
| Gene3D | 1376 | 1439 | 64 | 3.50E-04 | ||
| Pfam | 1442 | 1809 | 368 | 6.10E-99 | ||
| PANTHER | 1488 | 2254 | 767 | 0 | – | |
| PANTHER | 1488 | 2254 | 767 | 0 | ||
| Gene3D | 1491 | 1519 | 29 | 3.50E-04 | ||
| Gene3D | 1602 | 1638 | 37 | 3.50E-04 | ||
| Gene3D | 1708 | 1715 | 8 | 3.50E-04 | ||
| Pfam | 1916 | 2018 | 103 | 1.90E-40 | ||
| SMART | 1916 | 2019 | 104 | 1.70E-54 | – | |
| SUPERFAMILY | 1920 | 2017 | 98 | 5.49E-36 | ||
| Gene3D | 1920 | 2015 | 96 | 8.00E-39 | ||
| SUPERFAMILY | 2001 | 2164 | 164 | 3.16E-59 | ||
| Gene3D | 2016 | 2136 | 121 | 2.30E-19 | – | |
| Pfam | 2087 | 2251 | 165 | 8.30E-44 | ||
| ProSiteProfiles | 2087 | 2255 | 169 | 38.819 | ||
| SMART | 2088 | 2255 | 168 | 2.00E-09 | ||
| ProSitePatterns | 2091 | 2105 | 15 | – | ||
| Gene3D | 2137 | 2151 | 15 | 1.20E-26 | ||
| SUPERFAMILY | 2199 | 2253 | 55 | 3.16E-59 | ||
| Gene3D | 2206 | 2252 | 47 | 1.20E-26 | ||
| ProSitePatterns | 2228 | 2248 | 21 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. | ||
| Molecular function | Protein-containing complex binding | Interacting selectively and non-covalently with a macromolecular complex. |
Expression pattern of Lj1g3v0052210.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0052210.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.