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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1353680 |
| Transcript ID | Lj1g3v1353680.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: elongation factor 2-like [Glycine max] gi|356525774|ref|XP_003531498.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 5 | 127 | 123 | 4.25E-20 | ||
| Gene3D | 9 | 112 | 104 | 2.50E-38 | – | |
| PANTHER | 29 | 36 | 8 | 0 | – | |
| PANTHER | 29 | 36 | 8 | 0 | – | |
| PANTHER | 117 | 129 | 13 | 0 | – | |
| PANTHER | 117 | 129 | 13 | 0 | – | |
| Gene3D | 124 | 270 | 147 | 3.40E-54 | – | |
| SUPERFAMILY | 128 | 262 | 135 | 9.50E-41 | ||
| PANTHER | 155 | 470 | 316 | 0 | – | |
| PANTHER | 155 | 470 | 316 | 0 | – | |
| CDD | 162 | 254 | 93 | 6.02E-41 | – | |
| Pfam | 179 | 254 | 76 | 6.60E-13 | ||
| SUPERFAMILY | 270 | 346 | 77 | 4.68E-18 | ||
| Gene3D | 272 | 347 | 76 | 7.20E-24 | – | |
| Pfam | 273 | 335 | 63 | 4.50E-12 | ||
| CDD | 345 | 517 | 173 | 6.84E-97 | – | |
| SUPERFAMILY | 348 | 512 | 165 | 1.42E-63 | ||
| Gene3D | 359 | 513 | 155 | 2.30E-66 | ||
| SMART | 391 | 508 | 118 | 1.90E-23 | ||
| Pfam | 396 | 508 | 113 | 6.20E-32 | ||
| SMART | 510 | 599 | 90 | 7.40E-17 | ||
| Pfam | 510 | 597 | 88 | 1.80E-18 | ||
| CDD | 513 | 591 | 79 | 7.45E-43 | – | |
| SUPERFAMILY | 513 | 624 | 112 | 6.71E-29 | ||
| Gene3D | 514 | 615 | 102 | 1.50E-46 | ||
| PANTHER | 518 | 603 | 86 | 0 | – | |
| PANTHER | 518 | 603 | 86 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of Lj1g3v1353680.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1353680.1, powered by CORGI.
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