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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1453970 |
| Transcript ID | Lj1g3v1453970.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max] gi|356516495|ref|XP_003526929.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 82 | 543 | 462 | 0 | – | |
| PANTHER | 82 | 543 | 462 | 0 | – | |
| Gene3D | 91 | 235 | 145 | 6.30E-51 | ||
| SUPERFAMILY | 93 | 234 | 142 | 9.42E-32 | ||
| Pfam | 106 | 158 | 53 | 1.30E-17 | ||
| Pfam | 182 | 233 | 52 | 8.80E-19 | ||
| SUPERFAMILY | 252 | 526 | 275 | 5.14E-77 | ||
| Gene3D | 253 | 435 | 183 | 1.50E-50 | ||
| CDD | 275 | 427 | 153 | 3.06E-21 | – | |
| SMART | 292 | 432 | 141 | 4.20E-13 | ||
| Pfam | 297 | 413 | 117 | 1.20E-14 | ||
| Coils | 346 | 366 | 21 | – | – | |
| ProSitePatterns | 387 | 399 | 13 | – | ||
| Gene3D | 436 | 520 | 85 | 4.70E-33 | – | |
| ProSiteProfiles | 509 | 543 | 35 | 10.58 | ||
| Pfam | 510 | 542 | 33 | 5.40E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of Lj1g3v1453970.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1453970.1, powered by CORGI.
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