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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1526280 |
| Transcript ID | Lj1g3v1526280.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max] gi|356518443|ref|XP_003527888.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 310 | 310 | – | – | |
| PANTHER | 12 | 729 | 718 | 0 | – | |
| PANTHER | 12 | 729 | 718 | 0 | – | |
| Pfam | 105 | 409 | 305 | 5.80E-34 | ||
| SUPERFAMILY | 106 | 162 | 57 | 2.44E-12 | ||
| SUPERFAMILY | 264 | 508 | 245 | 2.44E-12 | ||
| Phobius | 311 | 327 | 17 | – | – | |
| Phobius | 328 | 1850 | 1523 | – | – | |
| Pfam | 472 | 804 | 333 | 7.60E-66 | ||
| SUPERFAMILY | 586 | 648 | 63 | 2.44E-12 | ||
| MobiDBLite | 1000 | 1033 | 34 | – | – | |
| PANTHER | 1066 | 1813 | 748 | 0 | – | |
| PANTHER | 1066 | 1813 | 748 | 0 | – | |
| SUPERFAMILY | 1287 | 1353 | 67 | 1.02E-15 | ||
| Gene3D | 1298 | 1347 | 50 | 2.70E-13 | – | |
| ProSiteProfiles | 1302 | 1343 | 42 | 15.294 | ||
| Pfam | 1303 | 1340 | 38 | 3.40E-09 | ||
| SMART | 1304 | 1342 | 39 | 2.10E-11 | ||
| CDD | 1307 | 1343 | 37 | 2.60E-15 | – | |
| ProSiteProfiles | 1348 | 1367 | 20 | 10.267 | ||
| SUPERFAMILY | 1381 | 1530 | 150 | 2.44E-12 | ||
| SUPERFAMILY | 1588 | 1653 | 66 | 2.44E-12 | ||
| MobiDBLite | 1718 | 1768 | 51 | – | – | |
| Phobius | 1851 | 1873 | 23 | – | – | |
| PANTHER | 1865 | 1945 | 81 | 0 | – | |
| PANTHER | 1865 | 1945 | 81 | 0 | – | |
| Phobius | 1874 | 1884 | 11 | – | – | |
| Phobius | 1885 | 1902 | 18 | – | – | |
| Phobius | 1903 | 3652 | 1750 | – | – | |
| MobiDBLite | 2041 | 2065 | 25 | – | – | |
| MobiDBLite | 2146 | 2206 | 61 | – | – | |
| SUPERFAMILY | 2206 | 2224 | 19 | 2.44E-12 | ||
| MobiDBLite | 2335 | 2354 | 20 | – | – | |
| MobiDBLite | 2366 | 2393 | 28 | – | – | |
| MobiDBLite | 2520 | 2566 | 47 | – | – | |
| Pfam | 2571 | 2669 | 99 | 1.20E-26 | ||
| MobiDBLite | 2590 | 2609 | 20 | – | – | |
| PANTHER | 2601 | 3186 | 586 | 0 | – | |
| PANTHER | 2601 | 3186 | 586 | 0 | – | |
| PANTHER | 3225 | 3652 | 428 | 0 | – | |
| PANTHER | 3225 | 3652 | 428 | 0 | – | |
| SUPERFAMILY | 3281 | 3644 | 364 | 1.24E-122 | ||
| CDD | 3290 | 3650 | 361 | 3.52E-154 | ||
| SMART | 3309 | 3652 | 344 | 3.50E-164 | ||
| ProSiteProfiles | 3311 | 3652 | 342 | 109.177 | ||
| Pfam | 3341 | 3651 | 311 | 1.80E-94 | ||
| Gene3D | 3412 | 3495 | 84 | 4.50E-25 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v1526280.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1526280.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.