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| Field | Value |
|---|---|
| Gene ID | Lj1g3v5061080 |
| Transcript ID | Lj1g3v5061080.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: tyrosine-sulfated glycopeptide receptor 1-like [Glycine max] gi|356504209|ref|XP_003520891.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 54 | 54 | – | – | |
| Phobius | 1 | 36 | 36 | – | – | |
| PANTHER | 6 | 398 | 393 | 5.40E-286 | – | |
| PANTHER | 6 | 398 | 393 | 5.40E-286 | – | |
| TMHMM | 28 | 50 | 23 | – | – | |
| Phobius | 37 | 50 | 14 | – | – | |
| Phobius | 51 | 54 | 4 | – | – | |
| Phobius | 55 | 640 | 586 | – | – | |
| Gene3D | 59 | 330 | 272 | 3.50E-53 | ||
| Pfam | 61 | 95 | 35 | 8.10E-07 | ||
| SUPERFAMILY | 75 | 270 | 196 | 1.07E-26 | ||
| SMART | 122 | 146 | 25 | 7.2 | ||
| ProSiteProfiles | 124 | 146 | 23 | 6.303 | ||
| SMART | 147 | 162 | 16 | 540 | – | |
| SMART | 147 | 171 | 25 | 100 | ||
| Pfam | 148 | 162 | 15 | 0.93 | ||
| ProSiteProfiles | 149 | 171 | 23 | 6.334 | ||
| PRINTS | 150 | 163 | 14 | 7.30E-06 | – | |
| SUPERFAMILY | 203 | 531 | 329 | 2.28E-57 | ||
| ProSiteProfiles | 208 | 231 | 24 | 4.686 | ||
| Pfam | 257 | 315 | 59 | 1.60E-06 | ||
| SMART | 278 | 301 | 24 | 130 | ||
| SMART | 278 | 304 | 27 | 49 | – | |
| ProSiteProfiles | 280 | 303 | 24 | 4.778 | ||
| SMART | 302 | 326 | 25 | 27 | ||
| ProSiteProfiles | 304 | 326 | 23 | 5.471 | ||
| ProSiteProfiles | 328 | 350 | 23 | 5.148 | ||
| Gene3D | 331 | 433 | 103 | 3.10E-18 | ||
| SMART | 351 | 375 | 25 | 29 | ||
| Pfam | 353 | 372 | 20 | 0.41 | ||
| ProSiteProfiles | 353 | 374 | 22 | 5.848 | ||
| SMART | 399 | 421 | 23 | 350 | ||
| ProSiteProfiles | 401 | 422 | 22 | 4.778 | ||
| PANTHER | 425 | 530 | 106 | 5.40E-286 | – | |
| PANTHER | 425 | 530 | 106 | 5.40E-286 | – | |
| ProSiteProfiles | 427 | 448 | 22 | 5.186 | ||
| Gene3D | 434 | 638 | 205 | 1.70E-42 | ||
| Pfam | 455 | 515 | 61 | 2.60E-10 | ||
| PRINTS | 478 | 491 | 14 | 7.30E-06 | – | |
| SMART | 478 | 493 | 16 | 72 | – | |
| SMART | 478 | 502 | 25 | 6 | ||
| ProSiteProfiles | 480 | 503 | 24 | 7.027 | ||
| ProSiteProfiles | 504 | 527 | 24 | 5.155 | ||
| SUPERFAMILY | 559 | 638 | 80 | 5.95E-16 | ||
| PANTHER | 568 | 640 | 73 | 5.40E-286 | – | |
| PANTHER | 568 | 640 | 73 | 5.40E-286 | – | |
| Pfam | 569 | 624 | 56 | 1.30E-06 | ||
| ProSiteProfiles | 589 | 612 | 24 | 5.625 | ||
| SMART | 611 | 634 | 24 | 23 | – | |
| SMART | 611 | 635 | 25 | 7.5 | ||
| ProSiteProfiles | 613 | 636 | 24 | 7.25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v5061080.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v5061080.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.