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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0451470 |
| Transcript ID | Lj2g3v0451470.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter B family member 28-like [Cicer arietinum] gi|502165769|ref|XP_004513684.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 167 | 167 | 0 | – | |
| PANTHER | 1 | 167 | 167 | 0 | – | |
| ProSiteProfiles | 1 | 154 | 154 | 23.891 | ||
| Phobius | 1 | 11 | 11 | – | – | |
| SUPERFAMILY | 2 | 167 | 166 | 6.93E-27 | ||
| Pfam | 2 | 141 | 140 | 1.60E-17 | ||
| Gene3D | 2 | 166 | 165 | 6.70E-32 | – | |
| TMHMM | 10 | 29 | 20 | – | – | |
| Phobius | 12 | 29 | 18 | – | – | |
| Phobius | 30 | 100 | 71 | – | – | |
| Phobius | 101 | 118 | 18 | – | – | |
| Phobius | 119 | 123 | 5 | – | – | |
| Phobius | 124 | 146 | 23 | – | – | |
| TMHMM | 124 | 146 | 23 | – | – | |
| Phobius | 147 | 475 | 329 | – | – | |
| PANTHER | 184 | 197 | 14 | 0 | – | |
| PANTHER | 184 | 197 | 14 | 0 | – | |
| PANTHER | 219 | 475 | 257 | 0 | – | |
| PANTHER | 219 | 475 | 257 | 0 | – | |
| SUPERFAMILY | 222 | 470 | 249 | 4.02E-86 | ||
| ProSiteProfiles | 231 | 469 | 239 | 24.603 | ||
| Gene3D | 231 | 464 | 234 | 4.90E-82 | ||
| CDD | 233 | 470 | 238 | 4.64E-127 | – | |
| Pfam | 249 | 400 | 152 | 1.30E-32 | ||
| SMART | 258 | 452 | 195 | 5.50E-18 | ||
| ProSitePatterns | 372 | 386 | 15 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v0451470.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0451470.1, powered by CORGI.
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