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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0451470 |
| Transcript ID | Lj2g3v0451470.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter B family member 28-like [Cicer arietinum] gi|502165769|ref|XP_004513684.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 102 | 102 | – | – | |
| PANTHER | 32 | 400 | 369 | 0 | – | |
| PANTHER | 32 | 400 | 369 | 0 | – | |
| MobiDBLite | 45 | 81 | 37 | – | – | |
| SUPERFAMILY | 92 | 395 | 304 | 7.72E-51 | ||
| Gene3D | 92 | 399 | 308 | 7.80E-59 | – | |
| TMHMM | 101 | 123 | 23 | – | – | |
| Phobius | 103 | 128 | 26 | – | – | |
| ProSiteProfiles | 104 | 387 | 284 | 36.368 | ||
| Pfam | 109 | 374 | 266 | 3.00E-35 | ||
| Phobius | 129 | 147 | 19 | – | – | |
| TMHMM | 146 | 168 | 23 | – | – | |
| Phobius | 148 | 168 | 21 | – | – | |
| Phobius | 169 | 243 | 75 | – | – | |
| TMHMM | 235 | 257 | 23 | – | – | |
| Phobius | 244 | 262 | 19 | – | – | |
| Phobius | 263 | 329 | 67 | – | – | |
| Phobius | 330 | 346 | 17 | – | – | |
| TMHMM | 330 | 349 | 20 | – | – | |
| Phobius | 347 | 357 | 11 | – | – | |
| TMHMM | 356 | 378 | 23 | – | – | |
| Phobius | 358 | 379 | 22 | – | – | |
| Phobius | 380 | 708 | 329 | – | – | |
| PANTHER | 417 | 430 | 14 | 0 | – | |
| PANTHER | 417 | 430 | 14 | 0 | – | |
| PANTHER | 452 | 708 | 257 | 0 | – | |
| PANTHER | 452 | 708 | 257 | 0 | – | |
| SUPERFAMILY | 455 | 703 | 249 | 1.01E-85 | ||
| ProSiteProfiles | 464 | 702 | 239 | 24.603 | ||
| Gene3D | 464 | 697 | 234 | 1.20E-81 | ||
| CDD | 466 | 703 | 238 | 3.44E-125 | – | |
| Pfam | 482 | 633 | 152 | 2.70E-32 | ||
| SMART | 491 | 685 | 195 | 5.50E-18 | ||
| ProSitePatterns | 605 | 619 | 15 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v0451470.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0451470.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.