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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1984140 |
| Transcript ID | Lj2g3v1984140.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2-like [Glycine max] gi|356495521|ref|XP_003516625.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| TMHMM | 7 | 26 | 20 | – | – | |
| Phobius | 7 | 18 | 12 | – | – | |
| PANTHER | 9 | 314 | 306 | 0 | – | |
| PANTHER | 9 | 314 | 306 | 0 | – | |
| Phobius | 19 | 26 | 8 | – | – | |
| Phobius | 27 | 628 | 602 | – | – | |
| Pfam | 27 | 67 | 41 | 2.70E-07 | ||
| Gene3D | 27 | 260 | 234 | 3.70E-52 | ||
| SUPERFAMILY | 75 | 424 | 350 | 3.92E-58 | – | |
| Pfam | 147 | 205 | 59 | 6.00E-08 | ||
| Pfam | 244 | 303 | 60 | 6.80E-07 | ||
| Gene3D | 261 | 440 | 180 | 8.20E-38 | ||
| PANTHER | 352 | 970 | 619 | 0 | – | |
| PANTHER | 352 | 970 | 619 | 0 | – | |
| SUPERFAMILY | 354 | 613 | 260 | 2.59E-44 | – | |
| Gene3D | 441 | 606 | 166 | 8.10E-35 | ||
| Pfam | 459 | 517 | 59 | 1.80E-06 | ||
| Pfam | 530 | 567 | 38 | 2.60E-06 | ||
| Phobius | 629 | 651 | 23 | – | – | |
| TMHMM | 629 | 651 | 23 | – | – | |
| Phobius | 652 | 982 | 331 | – | – | |
| SUPERFAMILY | 683 | 970 | 288 | 9.43E-71 | ||
| SMART | 684 | 976 | 293 | 3.10E-34 | ||
| ProSiteProfiles | 684 | 976 | 293 | 36.4 | ||
| Pfam | 686 | 895 | 210 | 4.40E-45 | ||
| Gene3D | 690 | 749 | 60 | 6.60E-20 | – | |
| ProSitePatterns | 690 | 713 | 24 | – | ||
| Gene3D | 750 | 962 | 213 | 2.60E-39 | – | |
| ProSitePatterns | 807 | 819 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj2g3v1984140.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1984140.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.