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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2904860 |
| Transcript ID | Lj2g3v2904860.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Receptor-like protein kinase [Medicago truncatula] gi|357493511|ref|XP_003617044.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 195 | 195 | 0 | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| PANTHER | 1 | 195 | 195 | 0 | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 26 | 26 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 3 | 18 | 16 | – | – | |
| Phobius | 19 | 26 | 8 | – | – | |
| Phobius | 27 | 955 | 929 | – | – | |
| Pfam | 31 | 80 | 50 | 2.00E-10 | ||
| Gene3D | 62 | 198 | 137 | 4.80E-24 | ||
| SUPERFAMILY | 89 | 346 | 258 | 5.26E-37 | – | |
| SMART | 109 | 132 | 24 | 87 | ||
| Pfam | 109 | 124 | 16 | 1.6 | ||
| ProSiteProfiles | 111 | 132 | 22 | 5.548 | ||
| SMART | 134 | 158 | 25 | 130 | ||
| ProSiteProfiles | 136 | 159 | 24 | 5.502 | ||
| Gene3D | 199 | 438 | 240 | 4.20E-57 | ||
| SMART | 237 | 258 | 22 | 220 | ||
| Pfam | 238 | 251 | 14 | 1.5 | ||
| ProSiteProfiles | 239 | 262 | 24 | 4.901 | ||
| SUPERFAMILY | 267 | 594 | 328 | 7.22E-59 | – | |
| PANTHER | 296 | 407 | 112 | 0 | – | |
| PANTHER | 296 | 407 | 112 | 0 | – | |
| SMART | 309 | 335 | 27 | 53 | – | |
| SMART | 309 | 332 | 24 | 12 | ||
| ProSiteProfiles | 311 | 333 | 23 | 7.05 | ||
| Pfam | 335 | 394 | 60 | 1.20E-07 | ||
| SMART | 357 | 381 | 25 | 78 | ||
| ProSiteProfiles | 359 | 381 | 23 | 6.387 | ||
| SMART | 381 | 407 | 27 | 41 | – | |
| ProSiteProfiles | 383 | 405 | 23 | 4.847 | ||
| SMART | 405 | 429 | 25 | 170 | ||
| ProSiteProfiles | 407 | 429 | 23 | 4.624 | ||
| SMART | 429 | 451 | 23 | 630 | – | |
| ProSiteProfiles | 431 | 453 | 23 | 6.303 | ||
| PRINTS | 432 | 445 | 14 | 5.80E-05 | – | |
| Gene3D | 439 | 504 | 66 | 6.10E-11 | ||
| SMART | 451 | 475 | 25 | 290 | ||
| PANTHER | 454 | 999 | 546 | 0 | – | |
| PANTHER | 454 | 999 | 546 | 0 | – | |
| ProSiteProfiles | 454 | 475 | 22 | 5.34 | ||
| SMART | 475 | 502 | 28 | 690 | – | |
| ProSiteProfiles | 477 | 498 | 22 | 5.086 | ||
| Gene3D | 526 | 781 | 256 | 4.20E-47 | ||
| Pfam | 527 | 563 | 37 | 1.20E-06 | ||
| ProSiteProfiles | 528 | 550 | 23 | 4.678 | ||
| PRINTS | 550 | 563 | 14 | 5.80E-05 | – | |
| SMART | 550 | 584 | 35 | 15 | – | |
| SMART | 550 | 573 | 24 | 8.1 | ||
| ProSiteProfiles | 552 | 574 | 23 | 7.458 | ||
| SUPERFAMILY | 584 | 776 | 193 | 6.97E-57 | ||
| SMART | 648 | 672 | 25 | 140 | ||
| ProSiteProfiles | 650 | 672 | 23 | 5.125 | ||
| Pfam | 695 | 711 | 17 | 0.18 | ||
| ProSiteProfiles | 698 | 719 | 22 | 6.18 | ||
| SMART | 720 | 745 | 26 | 310 | – | |
| Gene3D | 814 | 927 | 114 | 7.70E-29 | ||
| Pfam | 816 | 873 | 58 | 4.10E-09 | ||
| SUPERFAMILY | 818 | 927 | 110 | 6.97E-57 | ||
| ProSiteProfiles | 838 | 861 | 24 | 5.748 | ||
| SMART | 860 | 889 | 30 | 55 | – | |
| SMART | 860 | 884 | 25 | 18 | ||
| ProSiteProfiles | 862 | 885 | 24 | 7.235 | ||
| ProSiteProfiles | 886 | 907 | 22 | 5.933 | ||
| TMHMM | 956 | 975 | 20 | – | – | |
| Phobius | 956 | 975 | 20 | – | – | |
| Phobius | 976 | 1006 | 31 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v2904860.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2904860.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.