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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3223950 |
| Transcript ID | Lj2g3v3223950.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Receptor-like protein kinase [Medicago truncatula] gi|357492251|ref|XP_003616414.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | – | – | |
| SignalP | 1 | 17 | 17 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| TMHMM | 2 | 21 | 20 | – | – | |
| PANTHER | 3 | 202 | 200 | 0 | – | |
| PANTHER | 3 | 202 | 200 | 0 | – | |
| Phobius | 4 | 16 | 13 | – | – | |
| Phobius | 17 | 24 | 8 | – | – | |
| Phobius | 25 | 1004 | 980 | – | – | |
| Pfam | 33 | 86 | 54 | 2.60E-08 | ||
| Gene3D | 63 | 175 | 113 | 3.90E-24 | ||
| SUPERFAMILY | 95 | 454 | 360 | 5.49E-57 | – | |
| SMART | 115 | 139 | 25 | 23 | ||
| SMART | 140 | 164 | 25 | 92 | ||
| Gene3D | 178 | 348 | 171 | 3.10E-32 | ||
| SMART | 238 | 259 | 22 | 140 | ||
| Pfam | 264 | 323 | 60 | 1.40E-10 | ||
| PANTHER | 273 | 345 | 73 | 0 | – | |
| PANTHER | 273 | 345 | 73 | 0 | – | |
| SMART | 286 | 310 | 25 | 16 | ||
| PRINTS | 313 | 326 | 14 | 2.50E-05 | – | |
| Pfam | 338 | 395 | 58 | 5.90E-09 | ||
| Gene3D | 349 | 559 | 211 | 2.00E-41 | ||
| SMART | 358 | 381 | 24 | 5.6 | ||
| SMART | 358 | 380 | 23 | 280 | – | |
| SMART | 382 | 401 | 20 | 700 | – | |
| SMART | 382 | 406 | 25 | 18 | ||
| PANTHER | 389 | 432 | 44 | 0 | – | |
| PANTHER | 389 | 432 | 44 | 0 | – | |
| SMART | 406 | 435 | 30 | 120 | – | |
| SMART | 430 | 454 | 25 | 82 | ||
| SUPERFAMILY | 477 | 799 | 323 | 7.30E-52 | – | |
| PANTHER | 479 | 1048 | 570 | 0 | – | |
| PANTHER | 479 | 1048 | 570 | 0 | – | |
| SMART | 500 | 527 | 28 | 230 | – | |
| SMART | 500 | 524 | 25 | 130 | ||
| Gene3D | 560 | 794 | 235 | 1.60E-52 | ||
| SMART | 599 | 621 | 23 | 34 | ||
| SMART | 622 | 648 | 27 | 350 | – | |
| Pfam | 624 | 683 | 60 | 4.80E-08 | ||
| SMART | 670 | 693 | 24 | 16 | ||
| Pfam | 697 | 718 | 22 | 1.5 | ||
| SMART | 718 | 733 | 16 | 570 | – | |
| SUPERFAMILY | 844 | 969 | 126 | 8.50E-24 | ||
| Gene3D | 863 | 974 | 112 | 1.90E-28 | ||
| SMART | 883 | 906 | 24 | 350 | ||
| Pfam | 886 | 944 | 59 | 2.60E-09 | ||
| SMART | 907 | 933 | 27 | 42 | – | |
| PRINTS | 907 | 920 | 14 | 2.50E-05 | – | |
| SMART | 907 | 930 | 24 | 180 | ||
| SMART | 931 | 959 | 29 | 120 | ||
| TMHMM | 1004 | 1026 | 23 | – | – | |
| Phobius | 1005 | 1025 | 21 | – | – | |
| Phobius | 1026 | 1062 | 37 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v3223950.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3223950.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.