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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0938180 |
| Transcript ID | Lj3g3v0938180.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein strawberry notch homolog 1-like [Cicer arietinum] gi|502087519|ref|XP_004488559.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 83 | 585 | 503 | 0 | – | |
| PANTHER | 83 | 585 | 503 | 0 | ||
| MobiDBLite | 118 | 142 | 25 | – | – | |
| Pfam | 119 | 419 | 301 | 2.40E-129 | – | |
| SUPERFAMILY | 133 | 362 | 230 | 1.06E-13 | ||
| MobiDBLite | 560 | 614 | 55 | – | – | |
| Gene3D | 603 | 668 | 66 | 9.70E-11 | ||
| PANTHER | 604 | 1214 | 611 | 0 | ||
| PANTHER | 604 | 1214 | 611 | 0 | – | |
| SUPERFAMILY | 606 | 668 | 63 | 4.43E-12 | ||
| ProSiteProfiles | 616 | 666 | 51 | 9.205 | ||
| CDD | 618 | 663 | 46 | 2.35E-07 | – | |
| SMART | 618 | 664 | 47 | 1.40E-07 | ||
| ProSitePatterns | 619 | 663 | 45 | – | ||
| Pfam | 619 | 666 | 48 | 1.90E-07 | ||
| Pfam | 706 | 994 | 289 | 2.90E-105 | ||
| SUPERFAMILY | 760 | 865 | 106 | 4.43E-07 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of Lj3g3v0938180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0938180.1, powered by CORGI.
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