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cd15489

Source: CDD

Description

PHD_SF

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 11

Transcript Name Description Predicted domains Domain count
Lj2g3v1014400.1
– PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Cicer arietinum] gi|502090713|ref|XP_004489317.1|
Domains
32
Lj2g3v2437100.1
– PREDICTED: B3 domain-containing protein Os07g0679700-like [Cicer arietinum] gi|502096377|ref|XP_004490716.1|
Domains
12
Lj3g3v0938180.1
– PREDICTED: protein strawberry notch homolog 1-like [Cicer arietinum] gi|502087519|ref|XP_004488559.1|
Domains
21
Lj3g3v0938180.2
– PREDICTED: protein strawberry notch homolog 1-like [Cicer arietinum] gi|502087519|ref|XP_004488559.1|
Domains
22
Lj3g3v1128960.1
– Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|357472039|ref|XP_003606304.1|
Domains
22
Lj3g3v3016640.1
– Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|357472039|ref|XP_003606304.1|
Domains
22
LotjaGi2g1v0248100.1
– Methyl-CpG-binding domain-containing protein 9; TAIR: AT3G01460.1 methyl-CPG-binding domain 9; Swiss-Prot: sp|Q9SGH2|MBD9_ARATH Methyl-CpG-binding domain-containing protein 9; TrEMBL-Plants: tr|I1M022|I1M022_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0248100
Domains
32
LotjaGi2g1v0265500.1
– Nipped-B-like protein; TAIR: AT5G15540.1 PHD finger family protein; Swiss-Prot: sp|F5HSE3|NIPLA_DANRE Nipped-B-like protein A; TrEMBL-Plants: tr|K7LXL8|K7LXL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0265500
Domains
21
LotjaGi3g1v0131700.1
– Protein strawberry notch like 1; TAIR: AT1G79350.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|F4IF36|FGT1_ARATH Protein FORGETTER 1; TrEMBL-Plants: tr|A0A072TQ60|A0A072TQ60_MEDTR RING/FYVE/PHD zinc finger protein; Found in the gene: LotjaGi3g1v0131700
Domains
24
LotjaGi3g1v0481400.1
– Nucleosome-remodeling factor subunit BPTF; TAIR: AT5G22760.1 PHD finger family protein; Swiss-Prot: sp|F4JYC8|PTM_ARATH DDT domain-containing protein PTM; TrEMBL-Plants: tr|A0A1J7GFU1|A0A1J7GFU1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0481400
Domains
22
LotjaGi6g1v0152000.1
– Enhanced downy mildew 2, putative; TAIR: AT5G55390.1 ENHANCED DOWNY MILDEW 2; Swiss-Prot: sp|F4K3G5|EDM2_ARATH Protein ENHANCED DOWNY MILDEW 2; TrEMBL-Plants: tr|A0A0B2R910|A0A0B2R910_GLYSO PHD finger-containing protein; Found in the gene: LotjaGi6g1v0152000
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 9.09