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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0965560 |
| Transcript ID | Lj3g3v0965560.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: elongation factor 2-like [Glycine max] gi|356525774|ref|XP_003531498.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 220 | 219 | 0 | – | |
| Gene3D | 2 | 220 | 219 | 5.60E-67 | ||
| PANTHER | 2 | 220 | 219 | 0 | – | |
| SUPERFAMILY | 4 | 341 | 338 | 1.03E-106 | ||
| ProSiteProfiles | 17 | 344 | 328 | 54.004 | ||
| Pfam | 17 | 342 | 326 | 1.80E-64 | – | |
| TIGRFAM | 20 | 176 | 157 | 2.90E-17 | ||
| CDD | 20 | 230 | 211 | 2.47E-120 | – | |
| PRINTS | 21 | 34 | 14 | 4.00E-14 | ||
| ProSitePatterns | 58 | 73 | 16 | – | ||
| PRINTS | 65 | 73 | 9 | 4.00E-14 | ||
| PRINTS | 101 | 111 | 11 | 4.00E-14 | ||
| PRINTS | 117 | 128 | 12 | 4.00E-14 | ||
| PRINTS | 153 | 162 | 10 | 4.00E-14 | ||
| Gene3D | 222 | 326 | 105 | 6.00E-38 | – | |
| PANTHER | 243 | 249 | 7 | 0 | – | |
| PANTHER | 243 | 249 | 7 | 0 | – | |
| PANTHER | 331 | 343 | 13 | 0 | – | |
| PANTHER | 331 | 343 | 13 | 0 | – | |
| Gene3D | 338 | 484 | 147 | 3.00E-54 | – | |
| SUPERFAMILY | 342 | 476 | 135 | 6.19E-41 | ||
| PANTHER | 369 | 684 | 316 | 0 | – | |
| PANTHER | 369 | 684 | 316 | 0 | – | |
| CDD | 376 | 468 | 93 | 6.65E-40 | – | |
| Pfam | 393 | 468 | 76 | 1.50E-12 | ||
| SUPERFAMILY | 484 | 560 | 77 | 6.83E-18 | ||
| Gene3D | 486 | 561 | 76 | 1.10E-23 | – | |
| Pfam | 487 | 549 | 63 | 6.70E-12 | ||
| CDD | 559 | 731 | 173 | 1.32E-98 | – | |
| SUPERFAMILY | 562 | 726 | 165 | 3.79E-65 | ||
| Gene3D | 573 | 727 | 155 | 6.60E-68 | ||
| SMART | 605 | 722 | 118 | 5.10E-25 | ||
| Pfam | 610 | 722 | 113 | 1.60E-32 | ||
| Pfam | 724 | 811 | 88 | 2.20E-20 | ||
| SMART | 724 | 813 | 90 | 1.60E-19 | ||
| SUPERFAMILY | 727 | 838 | 112 | 2.11E-30 | ||
| CDD | 727 | 805 | 79 | 4.38E-47 | – | |
| Gene3D | 728 | 829 | 102 | 1.20E-48 | ||
| PANTHER | 732 | 817 | 86 | 0 | – | |
| PANTHER | 732 | 817 | 86 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of Lj3g3v0965560.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0965560.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.