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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0965570 |
| Transcript ID | Lj3g3v0965570.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Elongation factor EF-2 [Medicago truncatula] gi|357451779|ref|XP_003596166.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 165 | 165 | 0 | – | |
| PANTHER | 1 | 165 | 165 | 0 | – | |
| ProSiteProfiles | 1 | 289 | 289 | 42.472 | ||
| SUPERFAMILY | 2 | 286 | 285 | 2.04E-86 | ||
| Gene3D | 2 | 165 | 164 | 4.10E-46 | ||
| Pfam | 2 | 287 | 286 | 5.60E-46 | – | |
| ProSitePatterns | 3 | 18 | 16 | – | ||
| PRINTS | 10 | 18 | 9 | 4.10E-07 | ||
| PRINTS | 46 | 56 | 11 | 4.10E-07 | ||
| PRINTS | 62 | 73 | 12 | 4.10E-07 | ||
| PRINTS | 98 | 107 | 10 | 4.10E-07 | ||
| Gene3D | 167 | 271 | 105 | 5.40E-38 | – | |
| PANTHER | 188 | 194 | 7 | 0 | – | |
| PANTHER | 188 | 194 | 7 | 0 | – | |
| PANTHER | 276 | 288 | 13 | 0 | – | |
| PANTHER | 276 | 288 | 13 | 0 | – | |
| Gene3D | 283 | 429 | 147 | 2.70E-54 | – | |
| SUPERFAMILY | 287 | 421 | 135 | 5.52E-41 | ||
| PANTHER | 314 | 629 | 316 | 0 | – | |
| PANTHER | 314 | 629 | 316 | 0 | – | |
| CDD | 321 | 413 | 93 | 3.57E-40 | – | |
| Pfam | 338 | 413 | 76 | 1.30E-12 | ||
| SUPERFAMILY | 429 | 505 | 77 | 6.12E-18 | ||
| Gene3D | 431 | 506 | 76 | 9.80E-24 | – | |
| Pfam | 432 | 494 | 63 | 6.20E-12 | ||
| CDD | 504 | 676 | 173 | 3.16E-99 | – | |
| SUPERFAMILY | 507 | 671 | 165 | 3.29E-65 | ||
| Gene3D | 518 | 672 | 155 | 5.90E-68 | ||
| SMART | 550 | 667 | 118 | 5.10E-25 | ||
| Pfam | 555 | 667 | 113 | 1.40E-32 | ||
| SMART | 669 | 758 | 90 | 1.60E-19 | ||
| Pfam | 669 | 756 | 88 | 2.00E-20 | ||
| SUPERFAMILY | 672 | 783 | 112 | 1.92E-30 | ||
| CDD | 672 | 750 | 79 | 2.75E-47 | – | |
| Gene3D | 673 | 774 | 102 | 1.00E-48 | ||
| PANTHER | 677 | 762 | 86 | 0 | – | |
| PANTHER | 677 | 762 | 86 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of Lj3g3v0965570.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0965570.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.