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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2247050 |
| Transcript ID | Lj3g3v2247050.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: katanin p60 ATPase-containing subunit A1-like [Cicer arietinum] gi|502147679|ref|XP_004506874.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 517 | 517 | 7.10E-283 | – | |
| PANTHER | 1 | 517 | 517 | 7.10E-283 | – | |
| Hamap | 7 | 518 | 512 | 39.884 | ||
| MobiDBLite | 79 | 98 | 20 | – | – | |
| MobiDBLite | 103 | 216 | 114 | – | – | |
| Gene3D | 229 | 414 | 186 | 5.40E-62 | ||
| SUPERFAMILY | 230 | 515 | 286 | 5.68E-61 | ||
| CDD | 264 | 407 | 144 | 6.73E-26 | – | |
| SMART | 266 | 409 | 144 | 5.30E-17 | ||
| Pfam | 270 | 407 | 138 | 6.50E-38 | ||
| ProSitePatterns | 379 | 398 | 20 | – | ||
| Gene3D | 415 | 499 | 85 | 1.40E-19 | – | |
| Pfam | 471 | 516 | 46 | 4.60E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. | ||
| Molecular function | Microtubule-severing ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the severing of a microtubule at a specific spot along its length, coupled to the hydrolysis of ATP. | ||
| Biological process | Microtubule severing | The process in which a microtubule is broken down into smaller segments. Severing enzymes remove dimers from the middle of the filament to create new ends, unlike depolymerizing kinesins that use ATP to uncap microtubules at their ends |
Expression pattern of Lj3g3v2247050.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2247050.1, powered by CORGI.
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