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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2576200 |
| Transcript ID | Lj3g3v2576200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter B family member 19-like [Cicer arietinum] gi|502156572|ref|XP_004510541.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | – | – | |
| ProSiteProfiles | 1 | 168 | 168 | 26.245 | ||
| Pfam | 2 | 150 | 149 | 9.10E-28 | ||
| Gene3D | 3 | 185 | 183 | 8.90E-26 | – | |
| SUPERFAMILY | 4 | 188 | 185 | 3.27E-28 | ||
| TMHMM | 25 | 47 | 23 | – | – | |
| Phobius | 25 | 43 | 19 | – | – | |
| Phobius | 44 | 110 | 67 | – | – | |
| TMHMM | 111 | 133 | 23 | – | – | |
| Phobius | 111 | 133 | 23 | – | – | |
| Phobius | 134 | 138 | 5 | – | – | |
| Phobius | 139 | 164 | 26 | – | – | |
| TMHMM | 146 | 168 | 23 | – | – | |
| Phobius | 165 | 522 | 358 | – | – | |
| SUPERFAMILY | 195 | 439 | 245 | 2.07E-86 | ||
| Gene3D | 202 | 435 | 234 | 2.60E-81 | ||
| ProSiteProfiles | 203 | 439 | 237 | 24.437 | ||
| CDD | 203 | 440 | 238 | 3.11E-127 | – | |
| Pfam | 221 | 370 | 150 | 5.30E-33 | ||
| SMART | 230 | 431 | 202 | 1.20E-12 | ||
| PANTHER | 336 | 1056 | 721 | 0 | – | |
| PANTHER | 336 | 1056 | 721 | 0 | – | |
| ProSitePatterns | 342 | 356 | 15 | – | ||
| Gene3D | 511 | 826 | 316 | 2.00E-48 | – | |
| SUPERFAMILY | 512 | 808 | 297 | 1.09E-49 | ||
| Phobius | 523 | 551 | 29 | – | – | |
| ProSiteProfiles | 526 | 810 | 285 | 39.443 | ||
| Pfam | 526 | 794 | 269 | 1.20E-47 | ||
| TMHMM | 530 | 552 | 23 | – | – | |
| Phobius | 552 | 562 | 11 | – | – | |
| Phobius | 563 | 581 | 19 | – | – | |
| TMHMM | 565 | 587 | 23 | – | – | |
| Phobius | 582 | 643 | 62 | – | – | |
| TMHMM | 644 | 663 | 20 | – | – | |
| Phobius | 644 | 664 | 21 | – | – | |
| Phobius | 665 | 669 | 5 | – | – | |
| TMHMM | 670 | 692 | 23 | – | – | |
| Phobius | 670 | 689 | 20 | – | – | |
| Phobius | 690 | 748 | 59 | – | – | |
| Phobius | 749 | 772 | 24 | – | – | |
| TMHMM | 752 | 774 | 23 | – | – | |
| Phobius | 773 | 783 | 11 | – | – | |
| Phobius | 784 | 805 | 22 | – | – | |
| TMHMM | 787 | 804 | 18 | – | – | |
| Phobius | 806 | 1056 | 251 | – | – | |
| SUPERFAMILY | 843 | 1056 | 214 | 2.72E-75 | ||
| Gene3D | 846 | 1056 | 211 | 1.40E-74 | ||
| ProSiteProfiles | 847 | 1056 | 210 | 18.434 | ||
| Pfam | 866 | 1013 | 148 | 2.30E-31 | ||
| SMART | 874 | 1054 | 181 | 4.60E-13 | ||
| ProSitePatterns | 986 | 1000 | 15 | – | ||
| SUPERFAMILY | 990 | 998 | 9 | 1.09E-49 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v2576200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2576200.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.