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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3337380 |
| Transcript ID | Lj3g3v3337380.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: serine/threonine-protein kinase SMG1 [Glycine max] gi|356541123|ref|XP_003539032.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 192 | 192 | 0 | – | |
| ProSiteProfiles | 1 | 542 | 542 | 10.782 | ||
| PANTHER | 1 | 192 | 192 | 0 | – | |
| PANTHER | 226 | 270 | 45 | 0 | – | |
| PANTHER | 226 | 270 | 45 | 0 | – | |
| PANTHER | 414 | 434 | 21 | 0 | – | |
| PANTHER | 414 | 434 | 21 | 0 | – | |
| PANTHER | 456 | 1120 | 665 | 0 | – | |
| PANTHER | 456 | 1120 | 665 | 0 | – | |
| SMART | 575 | 703 | 129 | 0.0056 | – | |
| Coils | 602 | 622 | 21 | – | – | |
| SUPERFAMILY | 732 | 858 | 127 | 9.49E-70 | ||
| Gene3D | 748 | 830 | 83 | 1.10E-11 | – | |
| CDD | 752 | 1058 | 307 | 1.77E-163 | – | |
| ProSiteProfiles | 781 | 1051 | 271 | 39.114 | ||
| Pfam | 781 | 1057 | 277 | 6.80E-43 | ||
| SMART | 782 | 1112 | 331 | 5.90E-41 | ||
| Gene3D | 831 | 845 | 15 | 6.50E-50 | ||
| SUPERFAMILY | 922 | 1060 | 139 | 9.49E-70 | ||
| Gene3D | 929 | 1058 | 130 | 6.50E-50 | ||
| ProSitePatterns | 951 | 971 | 21 | – | ||
| Coils | 1336 | 1363 | 28 | – | – | |
| Coils | 1563 | 1583 | 21 | – | – | |
| MobiDBLite | 2283 | 2314 | 32 | – | – | |
| MobiDBLite | 2342 | 2395 | 54 | – | – | |
| PANTHER | 2483 | 2545 | 63 | 0 | – | |
| PANTHER | 2483 | 2545 | 63 | 0 | – | |
| Gene3D | 2498 | 2535 | 38 | 6.50E-50 | ||
| SMART | 2513 | 2545 | 33 | 8.80E-14 | ||
| ProSiteProfiles | 2513 | 2545 | 33 | 15.541 | ||
| Pfam | 2516 | 2545 | 30 | 6.40E-13 | ||
| Coils | 2545 | 2545 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
Expression pattern of Lj3g3v3337380.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3337380.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.