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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0000080 |
| Transcript ID | Lj4g3v0000080.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: dynamin-2B-like [Glycine max] gi|356563206|ref|XP_003549855.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 246 | 246 | 2.80E-06 | ||
| PANTHER | 1 | 521 | 521 | 0 | ||
| PANTHER | 1 | 521 | 521 | 0 | – | |
| Gene3D | 10 | 312 | 303 | 2.10E-57 | ||
| ProSiteProfiles | 34 | 304 | 271 | 47.715 | ||
| SUPERFAMILY | 35 | 313 | 279 | 1.37E-30 | ||
| PRINTS | 37 | 55 | 19 | 3.70E-10 | ||
| Pfam | 40 | 204 | 165 | 3.90E-30 | ||
| PRINTS | 62 | 79 | 18 | 3.70E-10 | ||
| ProSitePatterns | 63 | 72 | 10 | – | ||
| PRINTS | 174 | 192 | 19 | 3.70E-10 | ||
| PRINTS | 193 | 209 | 17 | 3.70E-10 | ||
| Pfam | 260 | 495 | 236 | 1.60E-22 | ||
| MobiDBLite | 508 | 572 | 65 | – | – | |
| PANTHER | 572 | 832 | 261 | 0 | – | |
| PANTHER | 572 | 832 | 261 | 0 | ||
| Gene3D | 572 | 702 | 131 | 2.50E-22 | ||
| ProSiteProfiles | 574 | 699 | 126 | 15.549 | ||
| SUPERFAMILY | 575 | 698 | 124 | 1.84E-19 | ||
| SMART | 575 | 701 | 127 | 1.20E-15 | ||
| Pfam | 579 | 697 | 119 | 5.40E-12 | ||
| MobiDBLite | 631 | 650 | 20 | – | – | |
| MobiDBLite | 703 | 728 | 26 | – | – | |
| SMART | 731 | 824 | 94 | 0.0041 | ||
| Pfam | 734 | 816 | 83 | 6.70E-14 | ||
| ProSiteProfiles | 736 | 829 | 94 | 20.148 | ||
| Coils | 790 | 810 | 21 | – | – | |
| MobiDBLite | 800 | 819 | 20 | – | – | |
| MobiDBLite | 824 | 920 | 97 | – | – | |
| PANTHER | 848 | 860 | 13 | 0 | ||
| PANTHER | 848 | 860 | 13 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of Lj4g3v0000080.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0000080.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.