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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0217750 |
| Transcript ID | Lj4g3v0217750.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max] gi|356512215|ref|XP_003524816.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 470 | 470 | 0 | – | |
| Phobius | 1 | 1837 | 1837 | – | – | |
| PANTHER | 1 | 470 | 470 | 0 | – | |
| SUPERFAMILY | 76 | 137 | 62 | 2.27E-12 | ||
| Pfam | 85 | 205 | 121 | 2.90E-14 | ||
| Pfam | 202 | 362 | 161 | 2.10E-25 | ||
| SUPERFAMILY | 255 | 336 | 82 | 2.96E-06 | ||
| SUPERFAMILY | 287 | 456 | 170 | 2.27E-12 | ||
| Gene3D | 296 | 449 | 154 | 7.10E-13 | ||
| SUPERFAMILY | 395 | 435 | 41 | 2.96E-06 | ||
| Pfam | 423 | 790 | 368 | 1.40E-87 | ||
| MobiDBLite | 462 | 482 | 21 | – | – | |
| PANTHER | 489 | 700 | 212 | 0 | – | |
| PANTHER | 489 | 700 | 212 | 0 | – | |
| SUPERFAMILY | 595 | 690 | 96 | 2.96E-06 | ||
| Gene3D | 675 | 676 | 2 | 7.10E-13 | ||
| MobiDBLite | 683 | 709 | 27 | – | – | |
| Gene3D | 743 | 809 | 67 | 7.10E-13 | ||
| SUPERFAMILY | 745 | 826 | 82 | 2.96E-06 | ||
| MobiDBLite | 910 | 943 | 34 | – | – | |
| MobiDBLite | 997 | 1016 | 20 | – | – | |
| PANTHER | 1049 | 1554 | 506 | 0 | – | |
| PANTHER | 1049 | 1554 | 506 | 0 | – | |
| SUPERFAMILY | 1293 | 1348 | 56 | 5.79E-15 | ||
| Gene3D | 1298 | 1343 | 46 | 4.30E-12 | – | |
| ProSiteProfiles | 1299 | 1340 | 42 | 14.788 | ||
| Pfam | 1300 | 1337 | 38 | 5.40E-08 | ||
| SMART | 1301 | 1339 | 39 | 1.00E-09 | ||
| CDD | 1303 | 1340 | 38 | 6.61E-17 | – | |
| ProSiteProfiles | 1346 | 1365 | 20 | 8.726 | ||
| SUPERFAMILY | 1348 | 1490 | 143 | 4.20E-06 | ||
| Gene3D | 1425 | 1524 | 100 | 7.10E-13 | ||
| PANTHER | 1570 | 1815 | 246 | 0 | – | |
| PANTHER | 1570 | 1815 | 246 | 0 | – | |
| SUPERFAMILY | 1583 | 1667 | 85 | 4.20E-06 | ||
| Phobius | 1838 | 1858 | 21 | – | – | |
| PANTHER | 1850 | 1930 | 81 | 0 | – | |
| PANTHER | 1850 | 1930 | 81 | 0 | – | |
| Phobius | 1859 | 2288 | 430 | – | – | |
| MobiDBLite | 2037 | 2057 | 21 | – | – | |
| MobiDBLite | 2074 | 2102 | 29 | – | – | |
| SUPERFAMILY | 2153 | 2186 | 34 | 4.20E-06 | ||
| MobiDBLite | 2154 | 2198 | 45 | – | – | |
| PANTHER | 2234 | 2241 | 8 | 0 | – | |
| PANTHER | 2234 | 2241 | 8 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v0217750.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0217750.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.