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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0423040 |
| Transcript ID | Lj4g3v0423040.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: receptor-like protein kinase 5-like [Vitis vinifera] gi|225470187|ref|XP_002268274.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 26 | 26 | – | – | |
| PANTHER | 3 | 138 | 136 | 0 | – | |
| PANTHER | 3 | 138 | 136 | 0 | – | |
| Phobius | 10 | 21 | 12 | – | – | |
| Phobius | 22 | 26 | 5 | – | – | |
| Phobius | 27 | 859 | 833 | – | – | |
| Gene3D | 37 | 78 | 42 | 1.60E-48 | ||
| Pfam | 41 | 76 | 36 | 3.20E-09 | ||
| Gene3D | 117 | 363 | 247 | 1.60E-48 | ||
| SMART | 120 | 143 | 24 | 60 | ||
| ProSiteProfiles | 122 | 143 | 22 | 5.818 | ||
| PANTHER | 155 | 906 | 752 | 0 | – | |
| PANTHER | 155 | 906 | 752 | 0 | – | |
| SUPERFAMILY | 159 | 496 | 338 | 2.59E-43 | – | |
| ProSiteProfiles | 166 | 187 | 22 | 7.088 | ||
| ProSiteProfiles | 191 | 211 | 21 | 4.77 | ||
| SMART | 215 | 238 | 24 | 280 | ||
| SMART | 240 | 264 | 25 | 120 | ||
| ProSiteProfiles | 242 | 264 | 23 | 4.909 | ||
| ProSiteProfiles | 291 | 313 | 23 | 4.601 | ||
| SMART | 313 | 336 | 24 | 280 | ||
| SMART | 313 | 339 | 27 | 30 | – | |
| Pfam | 315 | 372 | 58 | 5.10E-07 | ||
| ProSiteProfiles | 315 | 327 | 13 | 5.733 | ||
| SMART | 337 | 361 | 25 | 120 | ||
| ProSiteProfiles | 339 | 361 | 23 | 5.325 | ||
| Gene3D | 364 | 498 | 135 | 4.40E-08 | ||
| SMART | 459 | 483 | 25 | 140 | ||
| ProSiteProfiles | 461 | 483 | 23 | 5.81 | ||
| SUPERFAMILY | 481 | 676 | 196 | 1.39E-53 | ||
| Gene3D | 499 | 674 | 176 | 2.20E-38 | ||
| Pfam | 531 | 550 | 20 | 0.74 | ||
| ProSiteProfiles | 531 | 553 | 23 | 5.756 | ||
| ProSiteProfiles | 555 | 577 | 23 | 4.701 | ||
| SMART | 577 | 603 | 27 | 760 | – | |
| SMART | 577 | 600 | 24 | 54 | ||
| Pfam | 579 | 601 | 23 | 0.1 | ||
| ProSiteProfiles | 579 | 601 | 23 | 6.002 | ||
| ProSiteProfiles | 603 | 625 | 23 | 5.302 | ||
| SMART | 647 | 671 | 25 | 61 | ||
| SMART | 647 | 673 | 27 | 130 | – | |
| ProSiteProfiles | 649 | 671 | 23 | 5.017 | ||
| Gene3D | 717 | 830 | 114 | 2.70E-23 | ||
| SUPERFAMILY | 726 | 835 | 110 | 1.39E-53 | ||
| SMART | 744 | 768 | 25 | 19 | ||
| ProSiteProfiles | 746 | 768 | 23 | 6.095 | ||
| Pfam | 747 | 805 | 59 | 8.90E-07 | ||
| SMART | 768 | 794 | 27 | 78 | – | |
| ProSiteProfiles | 770 | 792 | 23 | 5.933 | ||
| ProSiteProfiles | 794 | 816 | 23 | 5.394 | ||
| TMHMM | 860 | 882 | 23 | – | – | |
| Phobius | 860 | 882 | 23 | – | – | |
| Phobius | 883 | 888 | 6 | – | – | |
| Phobius | 889 | 907 | 19 | – | – | |
| Phobius | 908 | 912 | 5 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v0423040.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0423040.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.