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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1474100 |
| Transcript ID | Lj4g3v1474100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356513621|ref|XP_003525510.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 21 | 21 | – | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| Phobius | 1 | 22 | 22 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| PANTHER | 6 | 143 | 138 | 1.60E-279 | – | |
| PANTHER | 6 | 143 | 138 | 1.60E-279 | – | |
| Phobius | 7 | 17 | 11 | – | – | |
| Phobius | 18 | 22 | 5 | – | – | |
| Phobius | 23 | 869 | 847 | – | – | |
| Pfam | 30 | 66 | 37 | 1.10E-10 | ||
| Gene3D | 30 | 318 | 289 | 4.80E-81 | ||
| SUPERFAMILY | 76 | 397 | 322 | 2.51E-64 | – | |
| SMART | 94 | 118 | 25 | 110 | ||
| ProSiteProfiles | 96 | 119 | 24 | 6.149 | ||
| ProSiteProfiles | 120 | 142 | 23 | 5.587 | ||
| SMART | 142 | 166 | 25 | 150 | ||
| SMART | 190 | 213 | 24 | 120 | ||
| SMART | 190 | 216 | 27 | 130 | – | |
| ProSiteProfiles | 192 | 213 | 22 | 4.978 | ||
| Pfam | 217 | 275 | 59 | 5.70E-09 | ||
| SMART | 238 | 261 | 24 | 23 | ||
| ProSiteProfiles | 240 | 263 | 24 | 6.803 | ||
| SMART | 262 | 285 | 24 | 190 | ||
| SMART | 262 | 285 | 24 | 210 | – | |
| ProSiteProfiles | 264 | 286 | 23 | 6.434 | ||
| SMART | 286 | 309 | 24 | 140 | ||
| SMART | 286 | 315 | 30 | 55 | – | |
| Pfam | 287 | 327 | 41 | 1.50E-06 | ||
| ProSiteProfiles | 288 | 310 | 23 | 7.389 | ||
| PRINTS | 289 | 302 | 14 | 1.40E-05 | – | |
| SMART | 310 | 335 | 26 | 61 | ||
| ProSiteProfiles | 312 | 334 | 23 | 5.802 | ||
| Gene3D | 319 | 419 | 101 | 1.20E-09 | ||
| PANTHER | 337 | 527 | 191 | 1.60E-279 | – | |
| ProSiteProfiles | 337 | 358 | 22 | 4.662 | ||
| PANTHER | 337 | 527 | 191 | 1.60E-279 | – | |
| ProSiteProfiles | 361 | 383 | 23 | 4.971 | ||
| SUPERFAMILY | 365 | 684 | 320 | 2.59E-66 | – | |
| SMART | 383 | 407 | 25 | 32 | ||
| ProSiteProfiles | 385 | 407 | 23 | 4.971 | ||
| Gene3D | 420 | 636 | 217 | 6.20E-58 | ||
| SMART | 479 | 503 | 25 | 230 | ||
| ProSiteProfiles | 481 | 503 | 23 | 4.616 | ||
| Pfam | 504 | 564 | 61 | 1.00E-06 | ||
| ProSiteProfiles | 505 | 527 | 23 | 5.902 | ||
| SMART | 551 | 573 | 23 | 39 | – | |
| ProSiteProfiles | 553 | 575 | 23 | 5.856 | ||
| ProSiteProfiles | 576 | 596 | 21 | 5.024 | ||
| Pfam | 576 | 635 | 60 | 2.20E-06 | ||
| PANTHER | 589 | 867 | 279 | 1.60E-279 | – | |
| PANTHER | 589 | 867 | 279 | 1.60E-279 | – | |
| ProSiteProfiles | 600 | 622 | 23 | 5.702 | ||
| SMART | 622 | 646 | 25 | 25 | ||
| SMART | 622 | 648 | 27 | 380 | – | |
| ProSiteProfiles | 624 | 645 | 22 | 5.279 | ||
| Gene3D | 637 | 844 | 208 | 1.60E-55 | ||
| ProSiteProfiles | 648 | 671 | 24 | 5.232 | ||
| SUPERFAMILY | 649 | 846 | 198 | 1.19E-44 | ||
| SMART | 670 | 694 | 25 | 36 | ||
| ProSiteProfiles | 672 | 694 | 23 | 5.402 | ||
| ProSiteProfiles | 696 | 718 | 23 | 5.964 | ||
| SMART | 718 | 741 | 24 | 290 | ||
| ProSiteProfiles | 744 | 766 | 23 | 5.017 | ||
| SMART | 791 | 810 | 20 | 180 | ||
| Pfam | 791 | 806 | 16 | 1.6 | ||
| ProSiteProfiles | 793 | 816 | 24 | 5.332 | ||
| PRINTS | 815 | 828 | 14 | 1.40E-05 | – | |
| SMART | 815 | 838 | 24 | 40 | ||
| ProSiteProfiles | 817 | 838 | 22 | 6.026 | ||
| Pfam | 817 | 838 | 22 | 1.2 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v1474100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1474100.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.