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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2018260 |
| Transcript ID | Lj4g3v2018260.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g23950-like [Glycine max] gi|356498787|ref|XP_003518230.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | – | – | |
| SignalP | 1 | 10 | 10 | – | – | |
| Phobius | 1 | 39 | 39 | – | – | |
| TMHMM | 10 | 32 | 23 | – | – | |
| Phobius | 16 | 31 | 16 | – | – | |
| PANTHER | 23 | 592 | 570 | 0 | – | |
| PANTHER | 23 | 592 | 570 | 0 | – | |
| Phobius | 32 | 39 | 8 | – | – | |
| Phobius | 40 | 248 | 209 | – | – | |
| Pfam | 45 | 84 | 40 | 2.20E-13 | ||
| SUPERFAMILY | 45 | 214 | 170 | 4.14E-32 | ||
| Gene3D | 47 | 204 | 158 | 1.20E-39 | ||
| ProSiteProfiles | 112 | 135 | 24 | 5.279 | ||
| Pfam | 135 | 195 | 61 | 1.60E-06 | ||
| ProSiteProfiles | 136 | 159 | 24 | 7.242 | ||
| Gene3D | 237 | 319 | 83 | 2.60E-14 | ||
| TMHMM | 249 | 271 | 23 | – | – | |
| Phobius | 249 | 272 | 24 | – | – | |
| Phobius | 273 | 655 | 383 | – | – | |
| SUPERFAMILY | 297 | 583 | 287 | 7.62E-73 | ||
| SMART | 313 | 568 | 256 | 1.80E-33 | ||
| ProSiteProfiles | 313 | 568 | 256 | 36.358 | ||
| Pfam | 314 | 532 | 219 | 4.20E-41 | ||
| ProSitePatterns | 319 | 341 | 23 | – | ||
| Gene3D | 320 | 391 | 72 | 1.00E-21 | – | |
| Gene3D | 392 | 591 | 200 | 3.40E-37 | – | |
| ProSitePatterns | 432 | 444 | 13 | – | ||
| MobiDBLite | 603 | 655 | 53 | – | – | |
| PANTHER | 620 | 641 | 22 | 0 | – | |
| PANTHER | 620 | 641 | 22 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj4g3v2018260.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2018260.1, powered by CORGI.
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