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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2253800 |
| Transcript ID | Lj4g3v2253800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Receptor-like protein kinase [Medicago truncatula] gi|357492663|ref|XP_003616620.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| PANTHER | 1 | 318 | 318 | 0 | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| PANTHER | 1 | 318 | 318 | 0 | – | |
| Phobius | 6 | 17 | 12 | – | – | |
| Phobius | 18 | 25 | 8 | – | – | |
| Phobius | 26 | 647 | 622 | – | – | |
| SUPERFAMILY | 30 | 328 | 299 | 3.23E-57 | ||
| Pfam | 31 | 69 | 39 | 6.00E-10 | ||
| Gene3D | 31 | 328 | 298 | 9.10E-65 | ||
| SMART | 123 | 147 | 25 | 65 | ||
| SMART | 171 | 195 | 25 | 210 | ||
| SMART | 219 | 242 | 24 | 9.6 | ||
| Gene3D | 340 | 625 | 286 | 1.50E-60 | ||
| SUPERFAMILY | 342 | 626 | 285 | 7.06E-59 | ||
| SMART | 345 | 368 | 24 | 200 | ||
| PANTHER | 360 | 999 | 640 | 0 | – | |
| PANTHER | 360 | 999 | 640 | 0 | – | |
| SMART | 442 | 466 | 25 | 110 | ||
| SMART | 491 | 514 | 24 | 7.7 | ||
| SMART | 563 | 587 | 25 | 47 | ||
| TMHMM | 648 | 670 | 23 | – | – | |
| Phobius | 648 | 670 | 23 | – | – | |
| Gene3D | 659 | 762 | 104 | 1.60E-17 | – | |
| Phobius | 671 | 1010 | 340 | – | – | |
| SUPERFAMILY | 689 | 973 | 285 | 2.87E-66 | ||
| SMART | 704 | 991 | 288 | 2.70E-31 | ||
| ProSiteProfiles | 704 | 1003 | 300 | 36.146 | ||
| Pfam | 706 | 971 | 266 | 3.40E-43 | ||
| ProSitePatterns | 710 | 733 | 24 | – | ||
| Gene3D | 763 | 972 | 210 | 1.10E-40 | – | |
| ProSitePatterns | 835 | 847 | 13 | – | ||
| TMHMM | 970 | 992 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj4g3v2253800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2253800.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.