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| Field | Value |
|---|---|
| Gene ID | Lj4g3v3113770 |
| Transcript ID | Lj4g3v3113770.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502138204|ref|XP_004503323.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 13 | 13 | – | – | |
| SignalP | 1 | 32 | 32 | – | – | |
| Phobius | 1 | 32 | 32 | – | – | |
| SignalP | 1 | 32 | 32 | – | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| PANTHER | 14 | 127 | 114 | 0 | – | |
| PANTHER | 14 | 127 | 114 | 0 | – | |
| Phobius | 14 | 27 | 14 | – | – | |
| Phobius | 28 | 32 | 5 | – | – | |
| Phobius | 33 | 476 | 444 | – | – | |
| Pfam | 41 | 67 | 27 | 0.081 | ||
| SUPERFAMILY | 41 | 310 | 270 | 3.23E-40 | ||
| Gene3D | 47 | 309 | 263 | 6.80E-49 | ||
| PANTHER | 231 | 323 | 93 | 0 | – | |
| PANTHER | 231 | 323 | 93 | 0 | – | |
| Gene3D | 340 | 442 | 103 | 8.10E-20 | ||
| Pfam | 341 | 374 | 34 | 0.043 | ||
| SUPERFAMILY | 375 | 440 | 66 | 3.23E-40 | ||
| Pfam | 400 | 436 | 37 | 1.60E-06 | ||
| PANTHER | 435 | 525 | 91 | 0 | – | |
| PANTHER | 435 | 525 | 91 | 0 | – | |
| MobiDBLite | 449 | 472 | 24 | – | – | |
| Gene3D | 460 | 513 | 54 | 2.70E-10 | ||
| Phobius | 477 | 501 | 25 | – | – | |
| TMHMM | 479 | 501 | 23 | – | – | |
| Phobius | 502 | 925 | 424 | – | – | |
| Gene3D | 547 | 586 | 40 | 2.70E-10 | ||
| PANTHER | 557 | 881 | 325 | 0 | – | |
| PANTHER | 557 | 881 | 325 | 0 | – | |
| SUPERFAMILY | 557 | 849 | 293 | 1.62E-78 | ||
| ProSiteProfiles | 573 | 853 | 281 | 40.612 | ||
| SMART | 573 | 853 | 281 | 1.80E-46 | ||
| Pfam | 574 | 847 | 274 | 2.50E-49 | ||
| CDD | 579 | 852 | 274 | 1.78E-91 | – | |
| ProSitePatterns | 579 | 601 | 23 | – | ||
| Gene3D | 587 | 639 | 53 | 2.90E-24 | – | |
| Gene3D | 640 | 848 | 209 | 8.40E-43 | – | |
| ProSitePatterns | 698 | 710 | 13 | – | ||
| MobiDBLite | 893 | 925 | 33 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj4g3v3113770.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v3113770.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.