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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1601850 |
| Transcript ID | Lj5g3v1601850.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: CTP synthase-like [Cicer arietinum] gi|502117735|ref|XP_004495920.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 560 | 560 | 0 | – | |
| Gene3D | 1 | 292 | 292 | 1.40E-141 | ||
| SUPERFAMILY | 1 | 272 | 272 | 7.50E-120 | ||
| TIGRFAM | 1 | 544 | 544 | 1.40E-224 | ||
| Hamap | 1 | 550 | 550 | 45.625 | ||
| PANTHER | 1 | 560 | 560 | 0 | ||
| Phobius | 1 | 20 | 20 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| Pfam | 2 | 272 | 271 | 1.30E-125 | ||
| CDD | 2 | 261 | 260 | 5.16E-155 | – | |
| Phobius | 4 | 15 | 12 | – | – | |
| Phobius | 16 | 20 | 5 | – | – | |
| Phobius | 21 | 561 | 541 | – | – | |
| Gene3D | 297 | 551 | 255 | 1.00E-98 | ||
| SUPERFAMILY | 297 | 549 | 253 | 1.19E-66 | ||
| CDD | 298 | 543 | 246 | 2.42E-130 | ||
| ProSiteProfiles | 299 | 552 | 254 | 20.623 | ||
| Pfam | 309 | 543 | 235 | 3.80E-55 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | CTP synthase activity | Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP. | ||
| Biological process | Pyrimidine nucleotide biosynthetic process | The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar. | ||
| Biological process | CTP biosynthetic process | The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate. |
Expression pattern of Lj5g3v1601850.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1601850.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.