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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1902660 |
| Transcript ID | Lj5g3v1902660.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | leucine-rich repeat transmembrane protein kinase [Glycine max] gi|223452532|gb|ACM89593.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 613 | 613 | – | – | |
| Gene3D | 2 | 117 | 116 | 2.50E-25 | ||
| Pfam | 2 | 60 | 59 | 9.30E-08 | ||
| PANTHER | 5 | 114 | 110 | 0 | – | |
| PANTHER | 5 | 114 | 110 | 0 | – | |
| SUPERFAMILY | 5 | 393 | 389 | 4.55E-67 | – | |
| SMART | 23 | 46 | 24 | 49 | ||
| PRINTS | 26 | 39 | 14 | 8.80E-06 | – | |
| SMART | 47 | 70 | 24 | 98 | ||
| SMART | 71 | 95 | 25 | 23 | ||
| Gene3D | 118 | 343 | 226 | 4.80E-63 | ||
| PANTHER | 146 | 407 | 262 | 0 | – | |
| PANTHER | 146 | 407 | 262 | 0 | – | |
| SMART | 192 | 216 | 25 | 67 | ||
| Pfam | 291 | 349 | 59 | 1.30E-07 | ||
| SMART | 312 | 336 | 25 | 43 | ||
| SUPERFAMILY | 340 | 586 | 247 | 1.13E-53 | ||
| Gene3D | 344 | 590 | 247 | 1.80E-66 | ||
| PANTHER | 429 | 954 | 526 | 0 | – | |
| PANTHER | 429 | 954 | 526 | 0 | – | |
| SMART | 432 | 455 | 24 | 22 | ||
| PRINTS | 432 | 445 | 14 | 8.80E-06 | – | |
| Pfam | 434 | 456 | 23 | 0.0092 | ||
| SMART | 480 | 504 | 25 | 160 | ||
| SMART | 529 | 559 | 31 | 110 | ||
| Phobius | 614 | 635 | 22 | – | – | |
| TMHMM | 614 | 636 | 23 | – | – | |
| Phobius | 636 | 979 | 344 | – | – | |
| Gene3D | 668 | 745 | 78 | 5.70E-20 | – | |
| SUPERFAMILY | 668 | 954 | 287 | 1.07E-70 | ||
| SMART | 682 | 958 | 277 | 6.90E-23 | ||
| ProSiteProfiles | 682 | 972 | 291 | 36.329 | ||
| Pfam | 684 | 951 | 268 | 9.90E-44 | ||
| ProSitePatterns | 688 | 711 | 24 | – | ||
| Gene3D | 746 | 956 | 211 | 6.10E-41 | – | |
| ProSitePatterns | 802 | 814 | 13 | – | ||
| MobiDBLite | 959 | 979 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj5g3v1902660.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1902660.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.