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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2258320 |
| Transcript ID | Lj5g3v2258320.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: serine/threonine-protein kinase ATR-like [Glycine max] gi|356534437|ref|XP_003535761.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 24 | 125 | 102 | 2.72E-05 | ||
| PANTHER | 35 | 594 | 560 | 0 | – | |
| PANTHER | 35 | 594 | 560 | 0 | – | |
| SUPERFAMILY | 196 | 352 | 157 | 2.72E-05 | ||
| SUPERFAMILY | 294 | 351 | 58 | 1.18E-16 | ||
| SUPERFAMILY | 459 | 530 | 72 | 1.18E-16 | ||
| SUPERFAMILY | 577 | 659 | 83 | 1.18E-16 | ||
| PANTHER | 675 | 1617 | 943 | 0 | – | |
| PANTHER | 675 | 1617 | 943 | 0 | – | |
| SUPERFAMILY | 734 | 982 | 249 | 1.18E-16 | ||
| SUPERFAMILY | 991 | 1356 | 366 | 9.30E-17 | ||
| SMART | 1097 | 1203 | 107 | 3.90E-27 | ||
| Pfam | 1100 | 1200 | 101 | 2.30E-15 | ||
| SUPERFAMILY | 1375 | 1411 | 37 | 8.15E-07 | ||
| SUPERFAMILY | 1495 | 1625 | 131 | 8.15E-07 | ||
| PANTHER | 1643 | 2123 | 481 | 0 | – | |
| PANTHER | 1643 | 2123 | 481 | 0 | – | |
| ProSiteProfiles | 1657 | 2266 | 610 | 42.682 | ||
| SUPERFAMILY | 1701 | 1789 | 89 | 8.15E-07 | ||
| Gene3D | 1737 | 1790 | 54 | 5.50E-08 | ||
| Pfam | 1802 | 2177 | 376 | 2.80E-50 | ||
| SUPERFAMILY | 1827 | 1909 | 83 | 8.15E-07 | ||
| Gene3D | 1958 | 2024 | 67 | 5.50E-08 | ||
| Gene3D | 2063 | 2116 | 54 | 5.50E-08 | ||
| PANTHER | 2146 | 2185 | 40 | 0 | – | |
| PANTHER | 2146 | 2185 | 40 | 0 | – | |
| SUPERFAMILY | 2152 | 2308 | 157 | 8.15E-07 | ||
| PANTHER | 2201 | 2720 | 520 | 0 | – | |
| PANTHER | 2201 | 2720 | 520 | 0 | – | |
| Gene3D | 2335 | 2451 | 117 | 9.20E-15 | – | |
| SUPERFAMILY | 2368 | 2480 | 113 | 2.04E-78 | ||
| CDD | 2374 | 2650 | 277 | 2.49E-150 | – | |
| ProSiteProfiles | 2403 | 2720 | 318 | 46.15 | ||
| SMART | 2404 | 2709 | 306 | 2.20E-80 | ||
| Pfam | 2405 | 2649 | 245 | 2.70E-48 | ||
| SUPERFAMILY | 2410 | 2499 | 90 | 8.15E-07 | ||
| Gene3D | 2452 | 2467 | 16 | 9.00E-54 | ||
| SUPERFAMILY | 2514 | 2652 | 139 | 2.04E-78 | ||
| Gene3D | 2521 | 2710 | 190 | 9.00E-54 | ||
| ProSitePatterns | 2543 | 2563 | 21 | – | ||
| ProSiteProfiles | 2688 | 2720 | 33 | 16.209 | ||
| SMART | 2688 | 2720 | 33 | 9.40E-14 | ||
| Pfam | 2689 | 2720 | 32 | 5.20E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
Expression pattern of Lj5g3v2258320.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2258320.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.