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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1164000 |
| Transcript ID | Lj6g3v1164000.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: C-type lectin receptor-like tyrosine-protein kinase At1g52310-like [Glycine max] gi|356532800|ref|XP_003534958.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| SignalP | 1 | 21 | 21 | – | – | |
| Phobius | 1 | 21 | 21 | – | – | |
| SignalP | 1 | 21 | 21 | – | – | |
| SignalP | 1 | 21 | 21 | – | – | |
| Phobius | 6 | 17 | 12 | – | – | |
| Phobius | 18 | 21 | 4 | – | – | |
| Phobius | 22 | 190 | 169 | – | – | |
| SUPERFAMILY | 22 | 174 | 153 | 5.25E-21 | ||
| Gene3D | 36 | 174 | 139 | 5.70E-18 | ||
| SMART | 41 | 175 | 135 | 2.10E-08 | ||
| ProSiteProfiles | 51 | 175 | 125 | 12.992 | ||
| CDD | 54 | 174 | 121 | 9.36E-14 | – | |
| Pfam | 62 | 174 | 113 | 1.00E-10 | ||
| PANTHER | 112 | 147 | 36 | 1.30E-255 | – | |
| PANTHER | 112 | 147 | 36 | 1.30E-255 | – | |
| PANTHER | 186 | 537 | 352 | 1.30E-255 | – | |
| PANTHER | 186 | 537 | 352 | 1.30E-255 | – | |
| Phobius | 191 | 216 | 26 | – | – | |
| TMHMM | 193 | 215 | 23 | – | – | |
| Gene3D | 206 | 315 | 110 | 1.60E-23 | – | |
| Phobius | 217 | 539 | 323 | – | – | |
| SUPERFAMILY | 226 | 530 | 305 | 6.15E-65 | ||
| ProSiteProfiles | 253 | 534 | 282 | 33.291 | ||
| SMART | 258 | 530 | 273 | 5.90E-14 | ||
| Pfam | 272 | 530 | 259 | 7.10E-41 | ||
| Gene3D | 316 | 530 | 215 | 1.70E-37 | – | |
| ProSitePatterns | 375 | 387 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein tyrosine kinase activity | Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj6g3v1164000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1164000.1, powered by CORGI.
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