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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0013500 |
| Transcript ID | LotjaGi1g1v0013500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor protein kinase-like protein; TAIR: AT5G56040.2 Leucine-rich receptor-like protein kinase family protein; Swiss-Prot: sp|C0LGR3|Y4265_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g26540; TrEMBL-Plants: tr|V4UNP7|V4UNP7_9ROSI Uncharacterized protein; Found in the gene: LotjaGi1g1v0013500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1758440..1762785) extracted from Lotus japonicus Gifu genome v1.2.
TGTCTATGTGGGGAACAAAATAGTTTATATATATACATGATTTTCAGCTCCACTATTTTCATGTTTGACATGTCACTATC GGTGAAACACTATCTAACATGTTTGGATCAAGCTTCTATTTTCTCAGAATCAATACTGAACCCTGAAGTTACTTACAAAA GCTTCTCCTCTCCATAATTGATTATGACTTTAGAATAAATTGTAGAAGGATTTCCAAACATATTATGAGACTAAAAACAT GTTTGGATAAGCTTCTCAATCATTTAAATTAATTCTGAAAAAGCTTTCCCTAGAATCATTTCTGACTATAGAATTAACTG TAGATGGATTTCCAAATATACTATGAGACTTACATGTTGGATTGCATAGACTGTAAATTCCATCATGGGAATGGCCATGT CCTTATCATTGAGCAAAACCTCTTACAATAATAAAAGAATCAATAACCTGGATCATGTGTCAAGAGCTTCTTCTCTTTCT CTATAAAAATAGTCATAGGATTTCCCCCTCTACAATCCCAAAACTGATCACTCCTCTCTCAGCAATGTCTGGAACCTTAA AGAATCTGTCACTTTCACCCAGAATTTTCTCCCTCACCTTGCTCCTCTCAATAAACTTTTTTTCCTGTTACTCCCTTAAC CAACAAGGCCAAGCTCTTTTAGCATGGAAAAACAGTTCAAACAGCACTGTAGATGCATTAGCATCTTGGAATCCATTAAA TACAAGTCCATGCAACTGGTTTGGGGTGCACTGCAACTCACAAGGTGAGGTGGTGGAGATAAACCTGAAATCAGTGAACT TGCAAGGCTCATCATTACCTTCGAATTTTCAACCTCTCAGGTCCTTGAAGGTTCTTGTCCTCTCATCAACCAACATTACA GGCAGGATTCCAAAAGAAATTGGAAATTATGAAGAGCTCATGGTCATTGATGTCAGTGACAATTCTCTCTTGGGGGAAAT CCCAGAAGAAATTTGCAGGCTAAGAAAACTGCAAAGCTTAGCTGTCCATGAGAACTTTCTTGAAGGCAATATTCCACCCA ACATAGGAAATTTATCAAGTCTTATGAACTTGACACTCTATGACAACAAACTGAGCGGTGAAATTCCAAAAAGTATTGGT TCCTTGAGCAAGCTCCAAGTGTTCAGAGCAGGAGGGAATGCAAACCTTAAGGGTGAGATTCCATGGAGCATTGGAAACTG CACCAACTTGGTCATGCTAGGCCTTGCAGAAACCAGAATTTCTGGGAGCCTTCCTTCTTCAATTGGGATGCTGAAAAGAA TTCAAACCATAGCCATGTACACAACTTTATTGTCAGGCTCTATCCCAGAAGAGATTGGGAACTGCAGTGAGTTGCAGAAC CTGTATTTGCATCAGAACTCAATTTCTGGTTCAATCCCAAGCCGAATTGGAGCCCTCAGCAAACTTCAGAATCTACTTTT ATGGCAAAACAACATAGTGGGAACAATCCCAGAAGATCTTGGAAGGTGCTCAGAACTCCAAGTCATAGACTTGTCAGAGA ATCTTCTCACAGGTAGCATACCAAGGAGCTTTGGGAAATTATCAAATCTCCAAGGGCTTCAGCTCAGTGTTAATCAACTC TCAGGTGTTATACCTCCTGAAATTTCAAATTGCACTTCTCTGAGCCAGCTTGAAATTGACAACAATGCTATTTCTGGTGA TATTCCTCCTGTTATTGGCAACTTGAGAAGCTTGACCTTGTTCTTTGCCTGGAAGAACAAACTAAGAGGAAAAATCCCAG ATAGTCTTTCACTGTGCCAAGATCTTCAGGCACTTGATCTGTCTTACAACCACTTAATTGGTCCAATACCAAAACAACTA TTTGGGTTGAAGAGTCTCACCAAATTGCTTCTCCTTTCCAATGATTTGTCTGGCTATATACCACCTGATGTAGGTAACTG CACAAGTCTCTACAGGTTGAGGCTAAATCAGAATAGACTTGCAGGTAACATTCCATCTGAGATTACCAACTTGAAGAATT TGAATTTCTTGGACATGAGCAGCAACCATCTTGTAGGGGAGATTCCTCCAACACTGTCCAGGTGCCACAATCTTGAGTTT CTCAATCTTAGTTGTAACCAGTTTTCTGGTAAAATTCCACCTCAGTTCTCTGGTCTTTTCAAACTTGGAGTGTTTGATCT CTCCCACAACAAGCTCTCAGGGAGTTTAGATGCTCTTTCTGGCCTTCAGAATCTTGTTTCCTTAAATGTTTCCTTCAATG ACTTCTCTGGAGAAATGCCTAACACCCCATTCTTCAGGAAACTCCCTCTCAGTGATCTCATTGCAAATAAAGATCTCTAC ATTCCTGGTGGTGTTGTAACTCCAGCAGATAAAATGGGAGTCAAAGTTCACACCAGATTAGCTATGACTCTGAAGATTGT AATGTCCATTCTCTTAGTCATCAGTGCAGTTCTAGTACTTCTCACAATCCATGTCTTGGTTCATGCTCATTTTGCAAACA AAGCACTCATGGGAAGTAACAGTAGGGTGATGAATTTGTATCAGAAGTTTGAATTTTCTATTGATAACATTGTCCAGAAT TTGACATCAGCCAATGTGATTGGCACTGGAAGGTCTGGAGTTGTGTATAAGGTAACAAGTCCAAAAGGCCAAACACTAGC AGTTAAAAGAATGTGGTCATCAGCAGAGTCTGGAGCGTTTAGTTCTGAAATTCAGAGGTTAGGCTCAATCAGGCATGATA ATATCATCAAGCTTCTCGGTTGGGCATCAAATAAGAATTTGAAGCTTCTGTTTTATGAATATCTCCCTAATGGAAGCCTG AGCTCATTGCTTCATGGTTCTGGAAAGGGAAAAGCAGAATGGGAGACCAGATATGAAATTGTGTTAGGCCTTGCTCAGGC ACTTGTATATTTACACCATGATTGTGTGCCTTCTATATCGCATGGAGATGTCAAATCCATGAATGTGTTACTTGGTTCTG GCTCTCATCCTTACCTTGTTGGCTTTGGCCTTTCAAGAATTGCAAGTGAAAATGGTGATGGTACTAATTTCAAGCCTGTC CAGAGACCCTGCCTTGCTGGTTCCTATGCATACATGGCTCCAGGTATATTTTCCACTAAATTTGAATTACTTGAATAATT TTCAGTCCTTATTGTCATGAGCCAAGTACCCTGAAATTTAAAACTTCTTAATTTTAAACATGCCCTCTCACGCAAGAGCC CTGGACTTAGATTCCCATGCACAAGTCCATATACCTTTTGTGCTTTAATTCAACTTATAATATTAGAATAATGAGTTTAA CAAGCCGGGATGGAACTAGACACAGAACCAGGTTGTTCCTAAATGGTGCAGTCGCCCCAAGAGAAAAAAAATTCTTTAAT AGAATACTAAATGCAGCATTTTCCCCCTTAAAATTTTTACACCACATCTTTTAATCAGCCATTATGATCTTACTTATTGC GTTAATTTTTTGCCTCCCTTATTCAATTTTTCCGACTCCGTCCCTAATAACAAGGATCGAGCTCTAGACTATTTGGTCAT AAAAACACTGATACCATCTTATGAACCAATTATTGCAGAAGCAAAAGCTATTATATTTCTAAGATATATAATCTCATGAA CAGTGCTAACTTCTGTTGTTTTGGTATATGCACAGAGCATGCATCAATGCAGAAAATTACTGAGAAGAGTGATGTGTACA GTTTTGGTGTGGTCCTTCTTGAGGTCCTGACAGGAAGACACCCATTAGAGCCAACTCTGCCTGGGGGTTCACACTTGGTT CAGTGGGTTAGGAACCACTTAGCTAGCAAAAGAGACCCATGTGACATTCTTGACCCAAAGCTGAGAGGGAGGACCGGCCC TACTATGCATGAAATACTACAAACACTAGCTGTGTCATTTCTTTGTGTCAGTGCTCAAGCTGAGGACCGTCCAACAATGA AGGACATTGTTGCAATGCTCAAGGAAATTAGACCTGTTGAGGCCTCAAAGACAGATCCTGATGTACGGAAGGGGTTTTAA CATCGCATACTAATAGCATGTTTGGTTCCACAGTGAAATGTTCTAGAATCACTTCTGGCTAGCCTAGAACCAAGAAGTCT TTGTTTTTTTTAGTAAACATGTCTTGAATTTTGAGCAAATCATGAAACCTAGTTTCACATGGTTCTTCTAACTGTTCCTT TTAATTTCTTAGAAGAGTACTCAATCGTTTAAGCTAGTATGCAAGTCATGGAGAACCCATGACTCATTAATTGTACACAG TCAAATGGAATGCATGTTAGAGTTGGCCAGGATTACTATAGATAGTGAAATGTAATCTGATATGCAAATTTCAAGAATAA TCCATTATAAAAAGCATTCGTATTGA
CDS sequence (LotjaGi1g1v0013500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTCAAGAGCTTCTTCTCTTTCTCTATAAAAATAGTCATAGGATTTCCCCCTCTACAATCCCAAAACTGATCACTCC TCTCTCAGCAATGTCTGGAACCTTAAAGAATCTGTCACTTTCACCCAGAATTTTCTCCCTCACCTTGCTCCTCTCAATAA ACTTTTTTTCCTGTTACTCCCTTAACCAACAAGGCCAAGCTCTTTTAGCATGGAAAAACAGTTCAAACAGCACTGTAGAT GCATTAGCATCTTGGAATCCATTAAATACAAGTCCATGCAACTGGTTTGGGGTGCACTGCAACTCACAAGGTGAGGTGGT GGAGATAAACCTGAAATCAGTGAACTTGCAAGGCTCATCATTACCTTCGAATTTTCAACCTCTCAGGTCCTTGAAGGTTC TTGTCCTCTCATCAACCAACATTACAGGCAGGATTCCAAAAGAAATTGGAAATTATGAAGAGCTCATGGTCATTGATGTC AGTGACAATTCTCTCTTGGGGGAAATCCCAGAAGAAATTTGCAGGCTAAGAAAACTGCAAAGCTTAGCTGTCCATGAGAA CTTTCTTGAAGGCAATATTCCACCCAACATAGGAAATTTATCAAGTCTTATGAACTTGACACTCTATGACAACAAACTGA GCGGTGAAATTCCAAAAAGTATTGGTTCCTTGAGCAAGCTCCAAGTGTTCAGAGCAGGAGGGAATGCAAACCTTAAGGGT GAGATTCCATGGAGCATTGGAAACTGCACCAACTTGGTCATGCTAGGCCTTGCAGAAACCAGAATTTCTGGGAGCCTTCC TTCTTCAATTGGGATGCTGAAAAGAATTCAAACCATAGCCATGTACACAACTTTATTGTCAGGCTCTATCCCAGAAGAGA TTGGGAACTGCAGTGAGTTGCAGAACCTGTATTTGCATCAGAACTCAATTTCTGGTTCAATCCCAAGCCGAATTGGAGCC CTCAGCAAACTTCAGAATCTACTTTTATGGCAAAACAACATAGTGGGAACAATCCCAGAAGATCTTGGAAGGTGCTCAGA ACTCCAAGTCATAGACTTGTCAGAGAATCTTCTCACAGGTAGCATACCAAGGAGCTTTGGGAAATTATCAAATCTCCAAG GGCTTCAGCTCAGTGTTAATCAACTCTCAGGTGTTATACCTCCTGAAATTTCAAATTGCACTTCTCTGAGCCAGCTTGAA ATTGACAACAATGCTATTTCTGGTGATATTCCTCCTGTTATTGGCAACTTGAGAAGCTTGACCTTGTTCTTTGCCTGGAA GAACAAACTAAGAGGAAAAATCCCAGATAGTCTTTCACTGTGCCAAGATCTTCAGGCACTTGATCTGTCTTACAACCACT TAATTGGTCCAATACCAAAACAACTATTTGGGTTGAAGAGTCTCACCAAATTGCTTCTCCTTTCCAATGATTTGTCTGGC TATATACCACCTGATGTAGGTAACTGCACAAGTCTCTACAGGTTGAGGCTAAATCAGAATAGACTTGCAGGTAACATTCC ATCTGAGATTACCAACTTGAAGAATTTGAATTTCTTGGACATGAGCAGCAACCATCTTGTAGGGGAGATTCCTCCAACAC TGTCCAGGTGCCACAATCTTGAGTTTCTCAATCTTAGTTGTAACCAGTTTTCTGGTAAAATTCCACCTCAGTTCTCTGGT CTTTTCAAACTTGGAGTGTTTGATCTCTCCCACAACAAGCTCTCAGGGAGTTTAGATGCTCTTTCTGGCCTTCAGAATCT TGTTTCCTTAAATGTTTCCTTCAATGACTTCTCTGGAGAAATGCCTAACACCCCATTCTTCAGGAAACTCCCTCTCAGTG ATCTCATTGCAAATAAAGATCTCTACATTCCTGGTGGTGTTGTAACTCCAGCAGATAAAATGGGAGTCAAAGTTCACACC AGATTAGCTATGACTCTGAAGATTGTAATGTCCATTCTCTTAGTCATCAGTGCAGTTCTAGTACTTCTCACAATCCATGT CTTGGTTCATGCTCATTTTGCAAACAAAGCACTCATGGGAAGTAACAGTAGGGTGATGAATTTGTATCAGAAGTTTGAAT TTTCTATTGATAACATTGTCCAGAATTTGACATCAGCCAATGTGATTGGCACTGGAAGGTCTGGAGTTGTGTATAAGGTA ACAAGTCCAAAAGGCCAAACACTAGCAGTTAAAAGAATGTGGTCATCAGCAGAGTCTGGAGCGTTTAGTTCTGAAATTCA GAGGTTAGGCTCAATCAGGCATGATAATATCATCAAGCTTCTCGGTTGGGCATCAAATAAGAATTTGAAGCTTCTGTTTT ATGAATATCTCCCTAATGGAAGCCTGAGCTCATTGCTTCATGGTTCTGGAAAGGGAAAAGCAGAATGGGAGACCAGATAT GAAATTGTGTTAGGCCTTGCTCAGGCACTTGTATATTTACACCATGATTGTGTGCCTTCTATATCGCATGGAGATGTCAA ATCCATGAATGTGTTACTTGGTTCTGGCTCTCATCCTTACCTTGTTGGCTTTGGCCTTTCAAGAATTGCAAGTGAAAATG GTGATGGTACTAATTTCAAGCCTGTCCAGAGACCCTGCCTTGCTGGTTCCTATGCATACATGGCTCCAGAGCATGCATCA ATGCAGAAAATTACTGAGAAGAGTGATGTGTACAGTTTTGGTGTGGTCCTTCTTGAGGTCCTGACAGGAAGACACCCATT AGAGCCAACTCTGCCTGGGGGTTCACACTTGGTTCAGTGGGTTAGGAACCACTTAGCTAGCAAAAGAGACCCATGTGACA TTCTTGACCCAAAGCTGAGAGGGAGGACCGGCCCTACTATGCATGAAATACTACAAACACTAGCTGTGTCATTTCTTTGT GTCAGTGCTCAAGCTGAGGACCGTCCAACAATGAAGGACATTGTTGCAATGCTCAAGGAAATTAGACCTGTTGAGGCCTC AAAGACAGATCCTGATGTACGGAAGGGGTTTTAA
Protein sequence (LotjaGi1g1v0013500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCQELLLFLYKNSHRISPSTIPKLITPLSAMSGTLKNLSLSPRIFSLTLLLSINFFSCYSLNQQGQALLAWKNSSNSTVD ALASWNPLNTSPCNWFGVHCNSQGEVVEINLKSVNLQGSSLPSNFQPLRSLKVLVLSSTNITGRIPKEIGNYEELMVIDV SDNSLLGEIPEEICRLRKLQSLAVHENFLEGNIPPNIGNLSSLMNLTLYDNKLSGEIPKSIGSLSKLQVFRAGGNANLKG EIPWSIGNCTNLVMLGLAETRISGSLPSSIGMLKRIQTIAMYTTLLSGSIPEEIGNCSELQNLYLHQNSISGSIPSRIGA LSKLQNLLLWQNNIVGTIPEDLGRCSELQVIDLSENLLTGSIPRSFGKLSNLQGLQLSVNQLSGVIPPEISNCTSLSQLE IDNNAISGDIPPVIGNLRSLTLFFAWKNKLRGKIPDSLSLCQDLQALDLSYNHLIGPIPKQLFGLKSLTKLLLLSNDLSG YIPPDVGNCTSLYRLRLNQNRLAGNIPSEITNLKNLNFLDMSSNHLVGEIPPTLSRCHNLEFLNLSCNQFSGKIPPQFSG LFKLGVFDLSHNKLSGSLDALSGLQNLVSLNVSFNDFSGEMPNTPFFRKLPLSDLIANKDLYIPGGVVTPADKMGVKVHT RLAMTLKIVMSILLVISAVLVLLTIHVLVHAHFANKALMGSNSRVMNLYQKFEFSIDNIVQNLTSANVIGTGRSGVVYKV TSPKGQTLAVKRMWSSAESGAFSSEIQRLGSIRHDNIIKLLGWASNKNLKLLFYEYLPNGSLSSLLHGSGKGKAEWETRY EIVLGLAQALVYLHHDCVPSISHGDVKSMNVLLGSGSHPYLVGFGLSRIASENGDGTNFKPVQRPCLAGSYAYMAPEHAS MQKITEKSDVYSFGVVLLEVLTGRHPLEPTLPGGSHLVQWVRNHLASKRDPCDILDPKLRGRTGPTMHEILQTLAVSFLC VSAQAEDRPTMKDIVAMLKEIRPVEASKTDPDVRKGF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 43 | 43 | - | – | |
| Phobius | 44 | 62 | 19 | - | – | |
| PANTHER | 54 | 545 | 492 | 0.0 | – | |
| PANTHER | 54 | 545 | 492 | 0.0 | – | |
| Gene3D | 54 | 218 | 165 | 3.6E-46 | ||
| Pfam | 62 | 101 | 40 | 1.7E-11 | ||
| Phobius | 63 | 647 | 585 | - | – | |
| SUPERFAMILY | 108 | 431 | 324 | 2.28E-58 | – | |
| SMART | 128 | 152 | 25 | 250.0 | ||
| SMART | 176 | 200 | 25 | 120.0 | ||
| Gene3D | 219 | 315 | 97 | 6.3E-26 | ||
| SUPERFAMILY | 312 | 618 | 307 | 6.46E-62 | – | |
| Gene3D | 316 | 410 | 95 | 5.3E-31 | ||
| SMART | 321 | 345 | 25 | 36.0 | ||
| Pfam | 322 | 382 | 61 | 4.3E-9 | ||
| SMART | 369 | 393 | 25 | 27.0 | ||
| Gene3D | 411 | 506 | 96 | 7.3E-25 | ||
| SMART | 465 | 489 | 25 | 220.0 | ||
| Gene3D | 507 | 606 | 100 | 2.9E-25 | ||
| SMART | 513 | 537 | 25 | 16.0 | ||
| PANTHER | 543 | 985 | 443 | 0.0 | – | |
| PANTHER | 543 | 985 | 443 | 0.0 | – | |
| SMART | 561 | 584 | 24 | 150.0 | ||
| TMHMM | 648 | 670 | 23 | - | – | |
| Phobius | 648 | 669 | 22 | - | – | |
| Phobius | 670 | 997 | 328 | - | – | |
| Gene3D | 678 | 776 | 99 | 7.7E-19 | – | |
| SUPERFAMILY | 689 | 978 | 290 | 1.48E-60 | ||
| ProSiteProfiles | 703 | 981 | 279 | 31.934 | ||
| SMART | 703 | 959 | 257 | 8.3E-19 | ||
| Pfam | 706 | 974 | 269 | 2.2E-35 | ||
| ProSitePatterns | 709 | 731 | 23 | - | ||
| Gene3D | 777 | 994 | 218 | 9.1E-50 | – | |
| ProSitePatterns | 821 | 833 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0013500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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