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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0062600 |
| Transcript ID | LotjaGi1g1v0062600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor protein kinase, putative; TAIR: AT3G21630.1 chitin elicitor receptor kinase 1; Swiss-Prot: sp|Q6UD73|LYK3_MEDTR LysM domain receptor-like kinase 3; TrEMBL-Plants: tr|Q70KR7|Q70KR7_LOTJA Nod-facor receptor 1b; Found in the gene: LotjaGi1g1v0062600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:8691405..8697675) extracted from Lotus japonicus Gifu genome v1.2.
CGTTACTATGTTCCCTCCACAATACATTCTCCTTGAAACTGTCAAGTGTCAACTGCACCCAAACATCCTTGTTTGTGATG AAAAGATCGAAAACGTGTGCTTATGAATTTACATGTTTACATTCACCAAAAATCAAAAGTTACACCTCTATACTTATCAC ATATGTTTGAGTCACTTTCCATATAAAATCCCATAGTCTATTAATTATCAGAGTAAGTGTGACATTAGTTTCAAGAGAAA AATAAATGATCAAAACCTGGTAGAGAGTCCTAGAAATTCAATGTTCTGATTTCTTTCATTCATCTCTGCTGCCATTTTGA TTTGCACAATGAAGCTAAAAACTGGTCTACTTTTGTTTTTCATTCTTTTGCTGGGGCATGTTTGTTTCCATGTGGAATCA AACTGTCTGAAGGGGTGTGATCTAGCTTTAGCTTCCTATTATATCTTGCCTGGTGTTTTCATCTTACAAAACATAACAAC CTTTATGCAATCAGAGATTGTCTCAAGTAATGATGCCATAACCAGCTACAACAAAGACAAAATTCTCAATGATATCAACA TCCAATCCTTTCAAAGACTCAACATTCCATTTCCATGTGACTGTATTGGTGGTGAGTTTCTAGGGCATGTATTTGAGTAC TCAGCTTCAAAAGGAGACACTTATGAAACTATTGCCAACCTCTACTATGCAAATTTGACAACAGTTGATCTTTTGAAAAG GTTCAACAGCTATGATCCAAAAAACATACCTGTTAATGCCAAGGTTAATGTCACTGTTAATTGTTCTTGTGGGAACAGCC AGGTTTCAAAAGATTATGGCTTGTTTATTACCTATCCCATTAGGCCTGGGGATACACTGCAGGATATTGCAAACCAGAGT AGTCTTGATGCAGGGTTGATACAGAGTTTCAACCCAAGTGTCAATTTCAGCAAAGATAGTGGGATAGCTTTCATTCCTGG AAGATGTATGTTATCCTTTTTGTTTTAAATTTTTCCGCTTTGATTAAAGTTTATTATTATTAGCATGATTGGATCAACTT CTCTTTCATCAAAATCATTTCTGAAACTCAGAAGCTACTCACACAAGCTTCCTGGTTTCAGAATCAATTGTAGTAGGGTT TCCAAACATGCTCTTTTATCAAAATCAATTACGTAACTCAGAAACTACTCACATAAGCTTCTCCTTAGAATTGATTCTGT TTTTAGAATCAATTGTAAAAGGGTTTACAAACATGCACTCTGCTAGTGTGTGTGCTTAAAACTATTCATGGTGAAATTAC TCTTCCATTGTTTCTACAATAATACATGACAAGGCATGTAACTTACCCCACCTAATTGAAAAATGGTTGGTGGTTATTGT TATATCATTTGTTCAATACATTTGATATAAACTTTTATGAATTTACCTGAAGTTTTACTTTTCTTTGAACTTTTCAGATA AAAATGGAGTCTATGTTCCCTTGTACCACAGGTGGGTAACTTCAATTGCCTACTCATCTTTTTATGATGAATGATAGCAT GTTTGGATCAACTTCTCTTTCACCAGAATTAATCCTTAAATTCAGAACTAAGAAGCTACTCACATAAGCTTTTTCCCGGA ATTAATTCTGGCTTCAGAAGCAATTACACTGAAAGATTTCCAAACATGCTCTAAATATTGTTTCGTGCTTGGTTCTATCT TTTTAACTTTCATTTATTTTTCCTTTTTCATTTTGCAGAACCGCAGGTTTGGCCCTCTAAATTGGTTCTAGGGATGATTA TTTTTACCTTGATGTTCACAAAAATATGAGAACACAAAAAAAGAGGATGCCTCTGAGCTTAGCTTTACTTCTATGTAAGC AGGTCTAGCTAGTGGTGCAGCTGTTGGTATATCTATTGCAGGAACCTTCGTGCTTCTGTTACTAGCATTTTGTATGTATG TTAGATACCAGAAGAAGGAAGAAGAGAAAGCTAAATTGCCAACAGATATTTCTATGGCCCTTTCAACACAAGATGGTAAT GGTATATTTCCAAATTCATATTCCTTCTAAGTTCTAACCCTCTTTAGTCCCCCTGGAAATGGGTGAATGTTGGTGCTCTA ATTTTTCATGTGTTTAAATCAGTTTTATACTAAGAGTCTGTTGGACAACAGGTTTTTGTTTTTAAAACAGAAAAAGCCGA AAATTTGTTTGATATGAAAAGTTTTAAGGAAATTCTTATTTTTTTGATATATCGGAAAATTCTTATTAAGTGTTCCTGTT CTCATTTTCTAAAACTAAAATTTCAAAACATCTCGGAGGATTTTTCTTCTTGTTTTTAGTTTTCAATTCACAGGTCTTTC AGTTTTGTAAGCATCTTGTTCAAATATAGATTTTCTTTTCTTCTTTTGAAAAACATGTCATAAAATTATTTCTGAAAATA GTTTTTAAATTTAGAGGACTGAGAAGAGAATCAAACAAGTCCTAATTTTTACCTTTTCCTGTTTATCATTTATAAACTTA TTACCTGATCTAATTTCAGGCTACATTTTACCTGATGTTAAAGGCAGAAAATTTACCTGATCCAAATGTTTGAGTTCCAT TCAATCTGGCACATTGATATAATTTGAGAGGATATGACAACACTAGCTAACTTTTCTTCCTCTTTCTTGAAGCCTCTAGT AGTGCAGAATATGAAACTTCTGGATCCAGTGGGCCAGGGACTGCTAGTGCTACAGGTCTTACTAGCATTATGGTGGCGAA ATCAATGGAGTTCTCATATCAGGAACTAGCGAAGGCTACAAATAACTTTAGCTTGGATAATAAAATTGGTCAAGGTGGAT TTGGAGCTGTCTATTATGCAGAATTGAGAGGCAAGGTAGTGACCGTGTGTCTCTTCAGTTCTATAACATAGTGCATGTTT GGATACAAAGAGGAAAACCACGGTGAAGCCAAATTTGCGGTGGACAGACACAAAAGCTAAAGGAAGTTGTCACCATGATT TTCAATTGTGTATCCAAACTTGCACAAAAGAGGATAGAAGTTTCTTACATTAGAGTAGTAGTGAAAAGTTTAAATTTTAA GGCTTTGTGTTCATTGTGAGGAAGCTATATAAAACAACTCAAATCAGTTTAGGGCAAAAAATTGTTTCATTGAAAAGAAA GATAAGAGTAATGATTTTACTTAAATGGATATTGTTCTTAAAGAGGTGGATGGGAAAGTTTCTGCTTTTTGTGCCACTTT AGGTTATCCCTTTAACTTTTAACTCTTCCTGGATTTCCTCTAATGCAATTTATTCAATGCAGAAAACAGCAATTAAGAAG ATGGATGTACAAGCATCAACAGAATTTCTTTGTGAGTTGAAGGTCTTAACACATGTTCACCACTTGAATCTGGTACAACA TCCTTCAAACAACTTAAAGCATTATTATATCTTTGGGAAGGAAAGATTAATATTTTTATGTTTAGTTTGAAGAATCATTA GGTTCTTACAAAACAAATATCCTTCATGGTTCTGTGAACTGAATAGTCCTATAGTTATCCAGCAAAATTTCTGCAGATCC ACATGATAGTCCAACATGGGATCTGCATTACTAGTGAAAGAACTTGTAAAACATTTGTAACTTCAATTTTCTGTCCTTGA AAGTAACAGACCATTTAGAGCACACTCCCCAACATTAATACCAAATAAAGAAGAAAATCAGCCCTCTTCCCGCATGTGTG GTTCCACTGTGAAATATTTGAAAATCACTTGTGATTAGAAGCTACAAGTCTAAGCTTCTGAGCAAACGTGTCTTGGATTT TGTGCTAATCATAAAGCCAAATATGCTATTAGTTAATGATTAAAGGCATTATTAGAAACTCCTTTATTTCCAATTGCCAC TGTTGATATGTTATTTGGATTTTTCAAACAGTTTCTCCTAACAAACAGGTTCAGAAAAAAAATTAGTATTAATTTCTATC TATGATTACTTAAAGAAGAAAGTGCTAAATTCTTTCTGGGATTTCAATATAACTATATCATACACTTTTCATTTAATTTT TCTAATTTTGGAATCTTTGTTTAGCATAAACAGCTCTAAGTAAGTTATAATTCTTATTCTGTATGTACCTACTTTCTATG AACAACATAGGTGCGCTTGATTGGATACTGCGTTGAGGGATCTCTATTCCTTGTTTATGAACATATTGACAATGGAAACT TAGGCCAATATTTGCATGGTTCAGGTGAGAACAGGATGCAGTGATATTTTTTTGCTGTGACATTATCAGCATGTTTGGAT CAATTTCTCTTTCACCAGAATTAATTCTGAAACAGAGAAGTAGCTTCTCCACAGAATTGATTCTGACTTCAGAGTCAATA GTAGAATTATTTCGAAACATGCACGGCATTATAGTCAAACAATTAATAATGATGATGACATGATTTCAGGTAAAGAACCA TTGCCATGGTCTAGCCGAGTACAAATAGCTCTAGATGCAGCAAGAGGCCTTGAATACATTCATGAGCACACTGTGCCTGT GTATATCCATCGCGATGTGAAATCTGCAAACATATTGATAGATAAGAACTTGCGTGGAAAGGTTGCATTTATTACCAATC TTCATGATCCAAATTCTTTCATTTCTTCTTTGAGACTTTAATCAAACTGTGAAAGTTTTTATGTTCAGGTTGCAGATTTT GGCTTGACCAAGCTTATTGAAGTTGGGAACTCCACACTACAAACTCGTCTGGTGGGAACATTTGGATACATGCCCCCAGA GTATGATTTTCTTTTGATGTTGTATTAATGGTGTTTTTGGATAAACAGTTTAATCAAAAGTTGATGGTAATAAACACCTA TCGCATAAGTGTTTATTCATAAACTATTTTGAGATGTTTATTGAGATAAAGTTAAAATATCTAATGAGTTTAGTGACTTA TGAAAGTAAGCTCTCAACAACTTATAAGTAGGGTATAAGGTATTTACAATACATAAGCTCTAACAAGCACTTAGATACAC ACATTTGAGCTTATCTTTCACAATAAATGCTCGTACAAGTGTTTGAGAGAGCTTGTGTAGCTTATGCGCTACCTAGAAGC TGATTTGAGCTTATTTTCACAAGTTGTTCATATTAGCTTATGAATAAGAGATTATGCTTATATATAATTTATTTTCAGCT TATTTCAATAAGTTCATCAAATTTGCTTATGAATAAGTGCTTGTGCGACAAGCGCTTATTGCTACAAGTGCTTAATTACG CTGTTTACCCATAAACGTGTTCAATTAGTAAAGTCAAGTTCAGTTTTCAAAACATATCATTGAGTGAACTTGTTTTACCT GGCTTTTATGCAGATATGCTCAATATGGTGATATTTCTCCAAAAATAGATGTATATGCATTTGGAGTTGTTCTTTTTGAA CTTATTTCTGCAAAGAATGCTGTTCTGAAGACAGGTGAATTAGTTGCTGAATCAAAGGGCCTTGTAGCTTTGGTGAGTCT ACATGCCCCTTCTCTAACCTTATTTACAAACCAATTACTCACAATTTCGAAAATTTTACATGTATATTTCAAAGCTACTC AGCACAAATGCATTTGCCCTTAACTTGCTTTGCATTGCAGTTTGAAGAAGCACTTAATAAGAGTGATCCTTGTGATGCTC TTCGCAAACTGGTGGATCCTAGGCTTGGAGAAAACTATCCAATTGATTCTGTTCTCAAGGTGGGAGCAATTCTCACTAAA ATTAATTTGAAATGAATTACTATCATTTAGTCACTTGAATGACTTTTTTTATCAGAACATAAGCAGGTTGTGTCTAGTTT TCTTTTGGTGGGTTTAGGACTTAAAGTTATCTTAGTGTAAAATTTTCTCATTTTACTAAACCTTAATGCTTTATTGTTGT TTGAGTTGCAGATTGCACAACTAGGGAGAGCTTGTACAAGAGATAATCCACTGCTAAGACCAAGTATGAGATCTTTAGTT GTTGCTCTTATGACCCTTTCATCACTTACTGAGGATTGTGATGATGAATCTTCCTACGAAAGTCAAACTCTCATAAATTT ACTGTCTGTGAGATAAAGGTTCTCCATGCAAATGCATGTTTGTTATATATATCTTGTAGTACAACTAAGCAGACAAAAAG TTTTGTACTTTGAATGTAAATCGAGTCAGGGTGTTTACATTTTATTACTCCAATGTTTAATTGCCAAAACCATCAAAAAG TCCTAGGCCAGACTTCCTGTAATTATATTTAGCAAAGTTGCAGATTCTAAGTTCAGTTTTTTTATATATAGGTTTCAGTA TTTTTTATATATATTATTTTATAAATTTTTT
CDS sequence (LotjaGi1g1v0062600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCTAAAAACTGGTCTACTTTTGTTTTTCATTCTTTTGCTGGGGCATGTTTGTTTCCATGTGGAATCAAACTGTCT GAAGGGGTGTGATCTAGCTTTAGCTTCCTATTATATCTTGCCTGGTGTTTTCATCTTACAAAACATAACAACCTTTATGC AATCAGAGATTGTCTCAAGTAATGATGCCATAACCAGCTACAACAAAGACAAAATTCTCAATGATATCAACATCCAATCC TTTCAAAGACTCAACATTCCATTTCCATGTGACTGTATTGGTGGTGAGTTTCTAGGGCATGTATTTGAGTACTCAGCTTC AAAAGGAGACACTTATGAAACTATTGCCAACCTCTACTATGCAAATTTGACAACAGTTGATCTTTTGAAAAGGTTCAACA GCTATGATCCAAAAAACATACCTGTTAATGCCAAGGTTAATGTCACTGTTAATTGTTCTTGTGGGAACAGCCAGGTTTCA AAAGATTATGGCTTGTTTATTACCTATCCCATTAGGCCTGGGGATACACTGCAGGATATTGCAAACCAGAGTAGTCTTGA TGCAGGGTTGATACAGAGTTTCAACCCAAGTGTCAATTTCAGCAAAGATAGTGGGATAGCTTTCATTCCTGGAAGATATA AAAATGGAGTCTATGTTCCCTTGTACCACAGAACCGCAGGTCTAGCTAGTGGTGCAGCTGTTGGTATATCTATTGCAGGA ACCTTCGTGCTTCTGTTACTAGCATTTTGTATGTATGTTAGATACCAGAAGAAGGAAGAAGAGAAAGCTAAATTGCCAAC AGATATTTCTATGGCCCTTTCAACACAAGATGGTAATGCCTCTAGTAGTGCAGAATATGAAACTTCTGGATCCAGTGGGC CAGGGACTGCTAGTGCTACAGGTCTTACTAGCATTATGGTGGCGAAATCAATGGAGTTCTCATATCAGGAACTAGCGAAG GCTACAAATAACTTTAGCTTGGATAATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGAATTGAGAGGCAA GAAAACAGCAATTAAGAAGATGGATGTACAAGCATCAACAGAATTTCTTTGTGAGTTGAAGGTCTTAACACATGTTCACC ACTTGAATCTGGTGCGCTTGATTGGATACTGCGTTGAGGGATCTCTATTCCTTGTTTATGAACATATTGACAATGGAAAC TTAGGCCAATATTTGCATGGTTCAGGTAAAGAACCATTGCCATGGTCTAGCCGAGTACAAATAGCTCTAGATGCAGCAAG AGGCCTTGAATACATTCATGAGCACACTGTGCCTGTGTATATCCATCGCGATGTGAAATCTGCAAACATATTGATAGATA AGAACTTGCGTGGAAAGGTTGCAGATTTTGGCTTGACCAAGCTTATTGAAGTTGGGAACTCCACACTACAAACTCGTCTG GTGGGAACATTTGGATACATGCCCCCAGAATATGCTCAATATGGTGATATTTCTCCAAAAATAGATGTATATGCATTTGG AGTTGTTCTTTTTGAACTTATTTCTGCAAAGAATGCTGTTCTGAAGACAGGTGAATTAGTTGCTGAATCAAAGGGCCTTG TAGCTTTGTTTGAAGAAGCACTTAATAAGAGTGATCCTTGTGATGCTCTTCGCAAACTGGTGGATCCTAGGCTTGGAGAA AACTATCCAATTGATTCTGTTCTCAAGATTGCACAACTAGGGAGAGCTTGTACAAGAGATAATCCACTGCTAAGACCAAG TATGAGATCTTTAGTTGTTGCTCTTATGACCCTTTCATCACTTACTGAGGATTGTGATGATGAATCTTCCTACGAAAGTC AAACTCTCATAAATTTACTGTCTGTGAGATAA
Protein sequence (LotjaGi1g1v0062600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLKTGLLLFFILLLGHVCFHVESNCLKGCDLALASYYILPGVFILQNITTFMQSEIVSSNDAITSYNKDKILNDINIQS FQRLNIPFPCDCIGGEFLGHVFEYSASKGDTYETIANLYYANLTTVDLLKRFNSYDPKNIPVNAKVNVTVNCSCGNSQVS KDYGLFITYPIRPGDTLQDIANQSSLDAGLIQSFNPSVNFSKDSGIAFIPGRYKNGVYVPLYHRTAGLASGAAVGISIAG TFVLLLLAFCMYVRYQKKEEEKAKLPTDISMALSTQDGNASSSAEYETSGSSGPGTASATGLTSIMVAKSMEFSYQELAK ATNNFSLDNKIGQGGFGAVYYAELRGKKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGN LGQYLHGSGKEPLPWSSRVQIALDAARGLEYIHEHTVPVYIHRDVKSANILIDKNLRGKVADFGLTKLIEVGNSTLQTRL VGTFGYMPPEYAQYGDISPKIDVYAFGVVLFELISAKNAVLKTGELVAESKGLVALFEEALNKSDPCDALRKLVDPRLGE NYPIDSVLKIAQLGRACTRDNPLLRPSMRSLVVALMTLSSLTEDCDDESSYESQTLINLLSVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 5 | 15 | 11 | - | – | |
| PANTHER | 8 | 622 | 615 | 3.8E-284 | – | |
| PANTHER | 8 | 622 | 615 | 3.8E-284 | – | |
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 227 | 207 | - | – | |
| Gene3D | 103 | 160 | 58 | 3.2E-8 | ||
| Pfam | 108 | 146 | 39 | 0.056 | ||
| Gene3D | 161 | 200 | 40 | 3.2E-8 | ||
| Pfam | 170 | 201 | 32 | 0.019 | ||
| Phobius | 228 | 253 | 26 | - | – | |
| TMHMM | 231 | 253 | 23 | - | – | |
| Phobius | 254 | 623 | 370 | - | – | |
| Gene3D | 294 | 395 | 102 | 3.5E-26 | – | |
| SUPERFAMILY | 304 | 595 | 292 | 3.69E-73 | ||
| ProSiteProfiles | 325 | 598 | 274 | 37.008 | ||
| SMART | 325 | 597 | 273 | 3.1E-32 | ||
| Pfam | 326 | 592 | 267 | 3.7E-43 | ||
| ProSitePatterns | 331 | 353 | 23 | - | ||
| Gene3D | 396 | 618 | 223 | 9.6E-53 | – | |
| ProSitePatterns | 440 | 452 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0062600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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