Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0067500 |
| Transcript ID | LotjaGi1g1v0067500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | E3 ubiquitin-protein ligase COP1; TAIR: AT2G32950.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|P93471|COP1_PEA E3 ubiquitin-protein ligase COP1; TrEMBL-Plants: tr|G7KH91|G7KH91_MEDTR E3 ubiquitin-protein ligase COP1; Found in the gene: LotjaGi1g1v0067500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:9342364..9354793) extracted from Lotus japonicus Gifu genome v1.2.
GATATTTTGATTCAAGTAGGTTGATAGAGAGAGACCCATCTAGAGGCTAACATTATGTGATGTGGCTTATAAGCATGAAG CTGCAAGCAAAGCCATCACGTGGAGTTCTCTCACCCTCACAAACTTACACTTATGGGACCCACTCTCTTTTCCCCTCTCA CACACACAAAACAACATCCAACACAAAATCACCACCACACCTTCACCAAAACAGAATCAACAACACTCTTCCGCAAGAAG AAACCGCCACAAACCACCACCACCACCGCCACCTCTCATGGAAGAGCTCTCAGTGGGGCCGTTAGTCCCCGCCGTGAGAC CCGAGCCATCTAAATCTCTCGCCGTCGCAGAAGCCGCCGCCGCTGTCGTCGCCGGAGACGCTGCGTTTCCGGTCTCGATG TCGGAGCCGGATAAGGACTTCTTGTGCCCGATTTGCATGCAGATCATCAAGGACGCGTTCCTCACCGCCTGCGGCCATAG CTTCTGCTACATGTGCATCATCACTCACCTCGGGAACAAGAGCGATTGCCCTTGCTGTGGCCACTACCTCACCAACAGCA ACTTGTTCCCTAACTTGTTGCTCGATAAGGTTCGCCCTAATCTCCCTTCCTCAGTAGCATGATTTGAATTGAGCTTAATT CGGTTTTGAAAATTGCATTTCGAAGAAGAATCTATGATTGTTGTAGAATGCGTGGTGTTTTGAGTTTCTAGATCTTGCTT GAAGGTGTAGCTTGAGCTTGAGTATGAGATTCGAGCAGAATTTTTATCTTGAATTTGATCTACTTCGAAATGCAGCTTAT TGTTATACGGTTTCTGTACCACATTTGTAGCTACTGAAGAAGACATCAGCTCGTCAAATATCAAGAACAGCGACCCCCGT GGAGCATTTCCGGCAGGCATTGCAAAAGGTTGGTTCATTTCTCCTATCCTACTCACTCTTGATTGGAATTTGTTTGAGGG TGATATGTGCCTTGAGTTGAGTGCTTTTAGGTTAACATCTTAGTGAAATACTTGTTAAGACTTACATAAGGTAATTTGAG AAGAAGTAGGCTCACATAACATAATTATGTAGAAGTAAGGTAAGCTAATTTGAGCTTATTCATAAGGTAAGCTAATTTGA GCTTATGAAATAAGGCTTAAAACAGCTTATTGGTAGTTTTATGAAATATTTCATAAGCTTACCTAAACACTTGTATAAAC ATTTATACTATAAGAAAAACTCAAATAAGCTTTTAAAAAAGCGACTTTGTTATAGTGCCTTATTATGAGCTTATTATGAA AATAGGCTTAAAACAGCTTATTGGTAGGTCATAAAATATTTCGTAAGCTTAGCTAAACACTTGTATTAACATTTATACTA TAAGAAAAACTCGAATAGGCTTTTCCGAAGCGACCTTTGTTATAGTTGATTTGGTTTAATTTTGTGGACTGTCGTAAACT TATAATCCGTTCGCACTTATTGTTTTACTTGTCGAGTATTTAATTTTGTAACTCCAATGTGGATATATGGCATCTTGCTG TTATGCCACGATAACGAGAAGCATTGATACTTAGTAGTACTCCCATGGGTTAGGGTTTTATTGAGGGACGAAACAAAGCT GTATAAACATTTTACTGTGGTGCTTCCATTGCTAACTATGCTAATTGGTCATCAGTAAGAGGTCTTTGTTGCAATTACAT GTTTTCCATCATGCTTTTCATGTTGTATCTGCGAGAAAGTTAAGTTCCAGAAAATTCGACTAAGAGGAATGTTTGTAAGA CTAATAGCCCCCTGTTCTTGGCAGCTAAAGTTGGAGGATGCTGGGGGAATACTGCAGCGCTTGCAGTGTTAGTTTCCTGT TAAGGGAAAATATAAATCGTCATTGCTATATGATTTTCCGTATCTTTGTTGTGATCACTGTTCCTTCTGTACTATCAGAA TCTACACTTTCAGTTAATTGGAGCCATATTTCATTATGTCATAATTATAATTTAATTTAAAACATCAAATAACATGGTAT CAGATGGAGGAGGAATAGAGGACAATTGGAGCGGGTTTTTGACATTCATTATGTTATACAATTCTTGCGACGCGATCAAG GACTGAACATTTTTTTACCTGATTCCAGATTTTACTGTCTAATATATTTTATGGAAGGGTTTTAATTTTGTTTTAGATTT ATTTGTTAATTAGATTTTGTGGAATCCATACAGCTTAGTTCACTGAAGATTACTCTATTTTTACATATTTCTATCTCGCA TGAATTTGTGGATCTGTGTTGGTGCTTTGTTAGTTATGATTCCTTTTTTCTTTTATTTAATTTTTAATTCTTTTGAATCT TGGAGCAGGGTTGTGATGTAACAATTAAAGAGCTAGACACCCTTTTGTTACTACTTGCTGAGAAGAAAAGAAAAATGGAA CAAGAAGAAGCTGAGAGAAATATGCAAATATTGTTAGATTTCTTGCAATGCTTAAGGAAGCAAAAAGTTGATGAGTTGAA GGAGGTGAGATGGATGCAATTATCTCTTTTCTTTTTTTACTAAATTATCATTAGCTTAATGTCTTTTTGGTTTGAGAAAA TAGTTTCAGATTATTTCCTAGTTTCACTAGTAATTAGAAAATTGTCACTAATTTTCACCCTTTTTCCTGTTTTCATAGAT TTCTACACGAAATAGTGAAACCAGGAAACAATTAAGTGAAAACAATAAATGAAAACAAAAATCATTTTCTCAAACTAAAC AGGTCCACAGGTTCCAATTTTTTCTTTTTTTCCTGTGTTAGTTGGTCTTTATTGCACTAGGACATTTTTCTTTGTTACAT AATATTGCTACTTAATGCAATCAATTGGTGTTTCATTTACAGGTTCAAACTGATCTTCAATTCATAAAGGAGGACATTAG TTCTGTGGAGAAACATAGACTGAACTTATACCGTGCACGGGACAGGTACTCTGTGAAATTGCGGATGCTTGATGATTCTG GTGGAAGAAAATCATGGCATTCATCAATGGATAAGAAGAACAGTGGCCTTTTATCTAGTCCGTTAAATCTTCGAGGAGGG TTGTCTTCAGGGAGTCATACCAAAAGAAATGATGGAAAGTCCCTAATAACCTCTCATGGGCATGGAATCCAAAGAAAAGA TGCCATCAGTGGATCAGATTCACAGTATATAAATCAATCGGGTCTTGCTCTAGTTAGGAAAAAAAGGGTTCATACACAGG TTTCATTTCTACTTTATTTCTGTGTGAATTTTTATTGAAATTTTAATGTCTGTTGGGAAAAGCTTTCTGGCATCAAAATA GTTGTAATTCATGACTGAAAATTGGAAAAGTACAAAATTTTAACGGACGAGTTTTTCTAAAAATTGGAATTTATTTATTA TTTATGTATTTCCTGAAAAATTCTGCTTTATACCATGAAAAGAAGTTCTGGGCTTTTTCATGAACAATCCCCATGCAAAT GTGCACTTAATGCCACCTTAAATGTTGCTGTTTAACTCTACACATTTAAAGCTACAGTACTTGTTCTTTTCTGCTCATTT TTTTATTGCCACAAGCTTCAGGGTTGATGTGGCTGTAGCACATCTTAGGAGAGACTTAGATTTAACTCTAAAGCTCGTTG GTTTTATGGAACTTAGAAAGACAGCAACCAAATTAGTGTGTATGAAATCTAAAATTAGTTAGTTGACATTAAAAATGGGA GAAGTTTGGTCTTCTTAAATGATTTAAAAGCCTTAAAGGTATCTTCGGGTGGATGCTCGGGGGATGGCTTGAGTTGGCAA GCATATATCAGTATGGGGCTTGTGTGAACTTATCTGTTGATAATAGCTTTATTGTTTGAATGGAGGTCTTAATTTGGGTT AGACCTAACTCTATTCCTAAAGCGAGCTCAAGGGTAAGGATTGTTTTCCCCTTTATAAAAATTAATTTGGCCATATATCT AGTTTATGTGGAACCTTAACACACCCTCACACCCAAGACTAGACACCCAAGTGTGAAGTTTTAGTGTTTTACGGACTAGA CATCTGCCGGTGGCCCATTTATGGGTGGCACAATAAACATATCTAGGATAGGCTTTGTTACCAAATTAGAATTTTGAAGG CAAGGATTTTTTTTTTAAAATGGACGATTTTGAATCGTGCAAGTAGTTGTATATTGGGTACTCAAGCTAGGAAACAGATT TGGATGATACTTCAAAGAAAAGAGAAAGGAAATTAGATCACAAAAAAGAGAAAAAGATCCTAGATTATGTATGCTATAAG ATGGAATTGCATTTGAAAGAAGCTATATCCTATATGTGTTTCGAAAATCTCATTTACCTAATGTCAAGCATTACATTGAC ATAAATAGCTTATTTAGTTCATTAAGGTCATCGTCTCTAATTCACAACCCTTGCTCCTTAGTTTATACCACTAAAATCAA AAAAATTAATGCCCAAATATCATGATATAATTTCTTGAGACCTCAAGTTACAATTGTAGCCCAATAAAAATTGTGGCTAA ATTATAATAAAATAAACATCAAACCGGAAATGCAGTTAAGAAAAACTTAGCTGATAGCAAACTTTATTGCTTATGAAGAG CAAAACTTGTATCAAAATTAGATTCTGATTTAATGTTTCTTTGCTTCTTAAGTTCTCTTATTTTGTCTTAATGCCTTATA ACTTAAGTCATGATTTTTCTGAACAACTTCTGGTATATGCTGCCTTCTATTGTTTTTTTGTTGTTGTTGCTGAATATTCA TCTATATACTTGGTTTTATTTATTTCCTCTCTGAACTCCACTTTGTCTTCCCTTGCTCCAGTTCAATGACCTACAAGAAT GTTATCTACAAAAAAGACGGCATGCAGCAGATAAACCCCATAGCCAACAAGATAGAGATGTAAATCTTATAAGTCGAGAA GGTTATAGTGCTGGTCTTGACGATTTTCAGTCAGTCTTGACAACTTTCACACGCTACAGGTATCTATTGGTTCTCTTCTG TCATTTGAAATATGAAGTCATACATTGGAAGGAAAGAAGGGTATTTTCCTGGAAGAATAAAGGGTAGTCAAAGCAGTTTG GAAAAGTTAGAGCTGTTAGTTAGTTAGAGGAGGATCATTTAGATAGAAAAGGGGAAATAGGGATGGAAAGGGGGCATTTA CAAAAATTATATTTTGTGTGAATCAAGCAAGTGCTCCATTGTAAACGGGGAAATCATTTATGAAGGGAAAACCCTTGAAG GAGAGGTCATCTCCTTTTTGTGTTTAATTTCAATTATTCAATAAAATAATCCTTCTCTTTTCTCCATTTACATTGGGACT TGCTAAAGAGATACAGGTCGTGATGTCAATTACTATTTTCTGGCGTCAGCAATACACAATTATCTTCAATCATTTTGCTT CATTTGAAACAGTCGATTGAGAGTCATTGCGGAACTAAGGCATGGGGATATATTTCATTCGGCCAACATAGTATCAAGGT GAGTTGTTATTTAAAATTGCTCTTTGAACTTTTGGTATTCATTTGCAGCTATGACTTTAGAAAAATAAACTAAACAATGG TTTTGTTCCAACCTATTGTCACTTATTGTATTATGGTTTCTTAATTTAGTCTGTAATCTGTGATTTCTCCACTATATTGT AATATTTTGTATAATCAAAGAGATATGAGACCATTTTAAATATAATTGATGGGATGAAAGCTTTTCTTTCCTTTTCCTTT TGTTTTTCTTTTTCCTTTTGTTCAATATTGATAAAGTTTGGATTCAAAGGGATTTTTGCATAGAATGTATTCATAGGTCT GTGATTAACTTTAATTGTTATGTTCTTCATCAACACCACTCCAAATATTCATTTAACATGAAAGTCAATGCTCTTCGTCA TGACTGATCTTTTCTTCGCCAAATCCTTTTTTCTGGTTATTATTGATTTCATACACTTTCATATATTGGTGGAAGGATAA TGTGGATTTTACATCATTGTGTAATAGGTATATTGGACATTTGGTCAGTACAGTAGGACCCTCTCGGAGGCCTAGCTTCC AATCCTTTTCCTTTATGCTTTCTCTTGTTTGCCACTGAAATTGACAATGCCCCTGGTTTTTGTGGGTACCTAATTGTAAT TAAGATGCTTTCTGGCCCTTGCCTTCCTGATCCAACTGACAAAAGAAGTGAGGCAAGCAACTTAATTTTTGGATTTTAGC CTTTCAAGACATTGCTGACTTTATAAAACCCCATCCCATGTATATATTAGTCGAACAATACCATTTCCCCCTTTTCAAAA TATTAATATCAAACAGTTGTATATATTTATTCCCTTCCTTCTCCCCTGTAATTTTTGTCTCTAGGTTCATTTGAGTGATA ATTTTTCTGATCTGGTAACTATCCACTGTGGAGAAGGTCCTTATTTACGTGAAATGTCTCTGAATCTCTAAAGCTAGATT CTTAATGCAAAATCTCTTGAAGATGAGTACACCAATATCTCCACTAGTATTGCTGGTGTATTATTTTCCATTAATGAACT GTGGTGTCTGGATGAGTGTCAGGGGAAAAGTTAGCAAAGGGGTTGGCTATTTCCTTGAGATGAAAGGCTATGAAATATTT TATATTCATTATTGTTATCTTCTTAGGGTGCAATCTTTAAGCTGTAGTTTGTATAATGAGTTGTTTCTTCAAGTTGTTAA TGTAAAATTTGTGAGCAATGGCCTAGTTACATTATTTGTGATTATCCAATTTTGTGTCTTGATTTGCACGTGTTATGTCA TGAAGTATTCCATATGGATCATGCTGGACTCTCTGCTTTCCTGTTCACATTTCGTGCTGGAGATAGATTATTTTAAAATA AGAATGTTGCGTACTATAACAAACATGTAGGTTATTTATAAGCTGATATACTTTCTCTTGCTCGTGATGTTGTCTTTAAT GTGAAGGAGGCAGACAAATGAAACTCCATGAATGATAAGAAGTGATCTTGTTGAACATTTAAGTTATATTGAAGTACTGA AGTTTTCTACGCTTACTGTATGTACTGAATGTGTGGTTTACCATGAATATTGCAGCATAGAGTTTGACCGTGATGATGAT TTGTTTGCTACTGCTGGGGTTTCACGGTGCATTAAAGTTTTTGACTTTTCTGCGGTAAGATGGATGACCTATTACTTTTG TTATTATTTGGGAAAACTTTTTACTGAACTGGATCAGAATAAGGAGAAATGAACTTAAATTGTTTAAGGTAATAACTGTT TTCCCTTGCTCTAATGTGGAGAAGAGACCTAGTTCAATGAAGAATTACAGAGATAGTAGAAACTGAAACAGAATGGTTAT ACCTGGCTTTTGAGAGCCCCGTCGTCTCCCAAAAACAGAATACATTTGAATGAATATACTCCTTTCTATACTAGCAGTCT ATTTATTAACATGTAACTTAATGCTAACAGACTAAGGACACATGAATGGTTTTTGGGAGAAGAGCCATTCTCAAACATTT GAACTTTGAAAAACAACATCAGTAACTATTTGAGGGGACATATAAATTATATGAAATAATTAGAAAAAATTAGATAGATT TCCTTATTTTAAAATAAAGGAAAAACATATAATATTTGACTTACTGCCATTTCCTTGGAATTATTTATAGCATTTCTAGT TAACTTTTTTTTTGTACTTTAACTGGCACATATATAACCGAAGTGAGCGAGCTTTAGAATCAGAACTACATATATTTTTA GTGCCTGAGGGGTTGTTATGCCTAACGCTATATAGATTATGATGCAGAAATAACCATTCCCTATTTTATTGCTTTCCAGG TTGTGAATGAACCTACAGATGCTCATTGTCCTGTAGTGGAGATGACTACACGTTCAAAACTCAGTTGCTTGAGTTGGAAT AAATTTGCTAAGAACCAAATAGCTAGTAGTGATTATGAAGGAATTGTGACTGTGTGGGATGTAACCACTCGGAAGGTAAT TGTGAAATCTAATTATCACTTTGTTCTTGCATCAGATGTTTCGGTATCTTAACTCACTGATTTCTTTGTTTTTTGTTGTA TGCTCGCGTAAAAGTTTTTCCCTTTTGTCACTCATGACTATCATTTTGTTTGGCAGAGTTTAATGGAATATGAAGAGCAT GAAAAACGTGCTTGGAGTGTTGATTTTTCAAGAACAGATCCCTCTATGCTGGTCTCTGGTAGTGATGACTGTAAGGTACT TTGGAACATTTATTAGGAAGTTTTAATGCCAATTTTTCTTCAATGTATCCGTAATTTCTGACACTTTTGCAACAAAACAT TAGTAGCATATATTTCTTAATTATTGATTTACAAACTTCATTTTTTGTTGTGTAATCCTACTAATTTTTACTGATGTAAG ACCTTGCAATTTTTTTTCTTGCATTTTGCGTAGTCAAAATCATTTTTTTGGCATGATAATTGTTGTCTTCTCAAGAGCTT GTGTTTGTCTCTGTTGTTCTACAACATGCTTGTGGCTCTTTTCAAGCAAATCCTTACAGTTTACAGCCTACTTATCATAT TTCTTCATTATTCAAGCAAGTTGAAGCAAAGAAAAATTAAACACGCTTACCTTTAGCTATTTGATTGGATAATAACCAAG TTTCATTTGGCACTTCGTAAAGGAGATATGATCATATCTAGGCTATAGTGCTGATATGCATTTTAAGGGATTTTCCAGAT AGCAAAATGGAGTACAAATATTGTTACGGACTCGAGGCGAAACTTTTAGATCTCAGAAAAAGAAGGGAGAGATATAAAAG AGAGAAAGAGAAAGGACAATTCTATAATTGTTCATTGAATCAAACTGAGATGAAAGGAGATAATTCTCCTTCCAAGGGAT TCCCCATCAATATAGGGTTTTTCCTTTCCCATTTGACAACTTGCTTGGATCCCCAAATCTTACAATCTGAATGAATCCTT CTTCTTGTTTGTGTTCACCATTCACATTTTCTTTTCATTCATCTGGATCCCATCAAATATATTCTTTTATTAATTCATAT TTATTTTAAAGAGATAGTATAGCTTTTCCTGCCAATTGAATTGCATGGTGGATAAGTGATTGAAATTGAACTAATTGTAA TTTCTCCCTTTTCTTTGAGCAGGTCAAAATATGGTGTACAAACCAGGAGGCTAGTGTCCTGAATATAGACATGAAAGCAA ACATATGTTGTGTCAAGTATAATCCTGGATGTGGCAACTTCATTGCAGTATGTGCCTTTCATTCAATTAGCAGAGAATAT CTCAATTTAGTTCACTTTATATTTGATCCCATCTGTGTATTATAATTTATATCATTCATCTGCCAGCTTGTCATGGTTGT GTGGCATAGTTAATTGAATGATACAGACGATTGTAGATATCCAAATGGTTGGGTTCCTTGTCTGCCTGTATTTGTATATT CTGGACAGTGCATTTTAGGATTTCACTTTTGGATAGTAGCTGCATTTGTGCAACTACCAACAATGATTGCATGAAACTCT TAATTTAGAATGATACTTGACCCTTCTCATTTTCTGTAATAGTGACTAGTCTTCTTATATTCTTGATGTCATAAATTGAA CATATCTTATACGGTATAATTTTCAAATATTGTTACAGGTTGGGTCAGCTGATCATCACATCCATTATTATGATTTGAGA AATACTAGCCGTCCGGTCCATGTTTTCAGTGGGCACAGGAAGGCTGTGTCATACGTGAAATTTTTGTCTAATGATGAACT TGCATCTGCATCAACGGATAGTACACTGCGATTATGGGATGTTAAGCAAAATTTACCAGTGAGTAATCTAAGAAAAATAG TTTCTCCCTATAGATTGATTATTATCAAATTTATCCTTCATTCTGCATTCAAGTTTTGGACTCCTGTTGGCTTTTGTTGC TTAATATGTATACTATCAATCTGTCTGCTGCAAGTTAAGTGCCTACCAATAATTTTATCGTAAATGTATAAAAAGTATCA GTTCTCTAATTTTATTGTAACAATCTAAATACGCATTTGTGTATTGTAAGTTTATGGGTATCACTTCCTTTTCATTAAAA TTTTTTTTGGCTGAAACTTATCAAAATTGGTTTGCAGACCATTTAAGGCGGACTATAGAATCGGTTTTGAATTGTGTAAA ATGGACTAATGCTGTCTGAAATCTGTTAAAACATTTAAATTGGAAAATTTTGACTCTTCAATTGTGATTTATTTTTAATT TCTTCATTTTTATTCAAATGTGTGCAGGTTCGAACTTTCAGAGGCCACACAAATGAGAAAAACTTTGTTGGCCTTACAGT AAGCAGTGAATACATTGCATGTGGCAGTGAAACAAATGAAGTATTTGTCTACCACAAGGTTTGTGGGTTTTAATGAAACA AATAGTTTCCCTTGCATTTGCCTAAGTAAATAGCTGAAGATTTATTCACCCTTTGCAGGAAATCTCCAAGCCTCTGACTT GGCATAGATTTAGTTCCCCTGAGATGGATGATGCGGAGGATGAGGCTGGATCTTACTTCATCAGCGCTGTATGCTGGAAG AGTGATCGCCCAACCGTACTAACTGCAAATAGTCAAGGCACAATCAAAGTTCTGGTGCTTGCAGCTTGAGCATATTGAAA AATGAATACAATGTTGAATCGGTATTATCTTTTCCCATGCTATGATGGTACCGATTCTTAATTGTACTTGTACATATTAT TTAAGTGTATATGGTAGGTTTTAGGGATCCTAATGAGGCATTAGTTCAGGACTTGAAACTTTTTATGATAAACCAATCAG GGACTGGACTTTAATTTTTACCAATTAAGGACCTCAACTTTATTAATAAAAATGTTTAAAGGCAACAATGTCGAATGTGG TATATGAAATAATTGATAACATGAGCAACACACATGGTGTTTGTGACAATTTGTTTTAATTACTATTGCTTTTTTGTTAA GTTGAGGTCCTTAATTGATTGTCAAAGTGGGCTTTAGGTGATAGATTTTAAACTGAAGTCCCTAATTGGTTATCACATTA GAGTTGAGGTCCTTAGAGAACACTGTTGAATGAGGTTTTGCGTTGAATTTCCTGTTTGAAGGAATCATAGGTGGTTGTAA GTTGTGACTGTAGAGTGTATAATAATCTCTTTCTTTTACCTTTTTTGGTTGTCATTTCTGGCTTAATTATGTGGCCCTGG CGCTTCTAATTAGCAATAGTCTCGTTATTGGATTTGGTTATTTAATAAAGGTTTTGTTTATTTTATCAACTATATTTAGT TTAAATAATTTTACTCACTTCTTTTTTTTTTTGCTTCATCTGAAAACTAACAGAGCTACAAAAACTAACGAACAAACAAA GAGTCCATAAGGACTAGCGTTTCAACATCTGAAGGAGGGTCTTCCAAGAAGCAAACGTCCATCAAAGCTGATCGAACTCC TGTCTTGGCGAGGGAATCCGCCGTCGCATTGCATTCTCGACGGGCTACATGAATGCTCAAGCTCCAATCCCTGGTCTTGA AGCTGCGAATGACATTCAGGATGGGCAGAAAATGACAGCTCTCTTCATCCTCCATCGCCTGCAGCAGCTCCCCACAGTCC ACCTCCACCATGACATGACGATGACCCCGATCCCACACCAGCTTCAGGCCTATCAACAGTGCAGTAGCTTCTGCAATTAA CGCATTCCCCCCTCTTCGGTGAGCATAAAAACCGCACAACCATTTGCCTTGATCATCCCGAATCAAGCCACCCGCCCCCA TACAACGATCCTGCTCCCAAAAACTCCCATCCACGTTCAGCTTAACAGTCCCTTGCCTCGGCGGTTGCCACCTGGAACTC AGCCAAGACCCAGGATCCCCTGCATCCCCATCTGAAAAAGTAATGAACTCATCGTGCTCATGACAAAGCTTACGCCAAGC TTCATCAACCGACCAAGGTGAATCCTCGAAAACCATGTTATTCCTCCATTTCCACACTCACCACACACCAGCCAAGAACT TCACGCTATTCCTAATTCGAGGCTGCTGATCCAACTGCGATGATCTCCAACACCAAAATTAGTCCACGCCAATGCCCCAA GCCTTAGCCAAATTTCTTGGGAGTGAGGGCAATCTCTGAGACAGTGTAAGATATCCTCCTCCGGGGCTGAACAACGAAAA AAACTAAAAAAAGAGAGAAATTTAAAAATGGAGAGATGTGTGACAAATTGAATGTATGTGTTTAACTGTTTACAGTGTAT ACTAACTGAAATTTGTAAAGCACATTAGATGTTTTTGCTATGCTTAATATAGAGAAAAAAAACAGAGTACAACTACTCAT ACACTCTGACATCTATGTGATATCTGCATCGTTTTCATTATCTGAATTAGGTCTTGAATTGATTTGTTATATTCTAATTT TGTAATACACTCTACATGTGAGGTAATGTCTTCGAAAATAAGAATGAAACAGTGTAGAGGCCAAGGACAGGAATCCATTT ATTATCTCTGCAGATTTGTAACACAGGAAT
CDS sequence (LotjaGi1g1v0067500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAGCTCTCAGTGGGGCCGTTAGTCCCCGCCGTGAGACCCGAGCCATCTAAATCTCTCGCCGTCGCAGAAGCCGC CGCCGCTGTCGTCGCCGGAGACGCTGCGTTTCCGGTCTCGATGTCGGAGCCGGATAAGGACTTCTTGTGCCCGATTTGCA TGCAGATCATCAAGGACGCGTTCCTCACCGCCTGCGGCCATAGCTTCTGCTACATGTGCATCATCACTCACCTCGGGAAC AAGAGCGATTGCCCTTGCTGTGGCCACTACCTCACCAACAGCAACTTGTTCCCTAACTTGTTGCTCGATAAGCTACTGAA GAAGACATCAGCTCGTCAAATATCAAGAACAGCGACCCCCGTGGAGCATTTCCGGCAGGCATTGCAAAAGGGTTGTGATG TAACAATTAAAGAGCTAGACACCCTTTTGTTACTACTTGCTGAGAAGAAAAGAAAAATGGAACAAGAAGAAGCTGAGAGA AATATGCAAATATTGTTAGATTTCTTGCAATGCTTAAGGAAGCAAAAAGTTGATGAGTTGAAGGAGGTTCAAACTGATCT TCAATTCATAAAGGAGGACATTAGTTCTGTGGAGAAACATAGACTGAACTTATACCGTGCACGGGACAGGTACTCTGTGA AATTGCGGATGCTTGATGATTCTGGTGGAAGAAAATCATGGCATTCATCAATGGATAAGAAGAACAGTGGCCTTTTATCT AGTCCGTTAAATCTTCGAGGAGGGTTGTCTTCAGGGAGTCATACCAAAAGAAATGATGGAAAGTCCCTAATAACCTCTCA TGGGCATGGAATCCAAAGAAAAGATGCCATCAGTGGATCAGATTCACAGTATATAAATCAATCGGGTCTTGCTCTAGTTA GGAAAAAAAGGGTTCATACACAGTTCAATGACCTACAAGAATGTTATCTACAAAAAAGACGGCATGCAGCAGATAAACCC CATAGCCAACAAGATAGAGATGTAAATCTTATAAGTCGAGAAGGTTATAGTGCTGGTCTTGACGATTTTCAGTCAGTCTT GACAACTTTCACACGCTACAGTCGATTGAGAGTCATTGCGGAACTAAGGCATGGGGATATATTTCATTCGGCCAACATAG TATCAAGCATAGAGTTTGACCGTGATGATGATTTGTTTGCTACTGCTGGGGTTTCACGGTGCATTAAAGTTTTTGACTTT TCTGCGGTTGTGAATGAACCTACAGATGCTCATTGTCCTGTAGTGGAGATGACTACACGTTCAAAACTCAGTTGCTTGAG TTGGAATAAATTTGCTAAGAACCAAATAGCTAGTAGTGATTATGAAGGAATTGTGACTGTGTGGGATGTAACCACTCGGA AGAGTTTAATGGAATATGAAGAGCATGAAAAACGTGCTTGGAGTGTTGATTTTTCAAGAACAGATCCCTCTATGCTGGTC TCTGGTAGTGATGACTGTAAGGTCAAAATATGGTGTACAAACCAGGAGGCTAGTGTCCTGAATATAGACATGAAAGCAAA CATATGTTGTGTCAAGTATAATCCTGGATGTGGCAACTTCATTGCAGTTGGGTCAGCTGATCATCACATCCATTATTATG ATTTGAGAAATACTAGCCGTCCGGTCCATGTTTTCAGTGGGCACAGGAAGGCTGTGTCATACGTGAAATTTTTGTCTAAT GATGAACTTGCATCTGCATCAACGGATAGTACACTGCGATTATGGGATGTTAAGCAAAATTTACCAGTTCGAACTTTCAG AGGCCACACAAATGAGAAAAACTTTGTTGGCCTTACAGTAAGCAGTGAATACATTGCATGTGGCAGTGAAACAAATGAAG TATTTGTCTACCACAAGGAAATCTCCAAGCCTCTGACTTGGCATAGATTTAGTTCCCCTGAGATGGATGATGCGGAGGAT GAGGCTGGATCTTACTTCATCAGCGCTGTATGCTGGAAGAGTGATCGCCCAACCGTACTAACTGCAAATAGTCAAGGCAC AATCAAAGTTCTGGTGCTTGCAGCTTGA
Protein sequence (LotjaGi1g1v0067500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEELSVGPLVPAVRPEPSKSLAVAEAAAAVVAGDAAFPVSMSEPDKDFLCPICMQIIKDAFLTACGHSFCYMCIITHLGN KSDCPCCGHYLTNSNLFPNLLLDKLLKKTSARQISRTATPVEHFRQALQKGCDVTIKELDTLLLLLAEKKRKMEQEEAER NMQILLDFLQCLRKQKVDELKEVQTDLQFIKEDISSVEKHRLNLYRARDRYSVKLRMLDDSGGRKSWHSSMDKKNSGLLS SPLNLRGGLSSGSHTKRNDGKSLITSHGHGIQRKDAISGSDSQYINQSGLALVRKKRVHTQFNDLQECYLQKRRHAADKP HSQQDRDVNLISREGYSAGLDDFQSVLTTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDDLFATAGVSRCIKVFDF SAVVNEPTDAHCPVVEMTTRSKLSCLSWNKFAKNQIASSDYEGIVTVWDVTTRKSLMEYEEHEKRAWSVDFSRTDPSMLV SGSDDCKVKIWCTNQEASVLNIDMKANICCVKYNPGCGNFIAVGSADHHIHYYDLRNTSRPVHVFSGHRKAVSYVKFLSN DELASASTDSTLRLWDVKQNLPVRTFRGHTNEKNFVGLTVSSEYIACGSETNEVFVYHKEISKPLTWHRFSSPEMDDAED EAGSYFISAVCWKSDRPTVLTANSQGTIKVLVLAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 675 | 675 | 0.0 | ||
| PANTHER | 1 | 675 | 675 | 0.0 | – | |
| Gene3D | 36 | 139 | 104 | 1.3E-17 | ||
| SUPERFAMILY | 42 | 108 | 67 | 8.94E-19 | – | |
| CDD | 46 | 91 | 46 | 3.19681E-22 | – | |
| Pfam | 50 | 87 | 38 | 2.7E-10 | – | |
| SMART | 50 | 87 | 38 | 4.7E-6 | ||
| ProSiteProfiles | 50 | 87 | 38 | 11.752 | ||
| ProSitePatterns | 65 | 74 | 10 | - | ||
| Coils | 136 | 159 | 24 | - | – | |
| Coils | 173 | 200 | 28 | - | – | |
| MobiDBLite | 220 | 278 | 59 | - | – | |
| MobiDBLite | 232 | 259 | 28 | - | – | |
| Gene3D | 342 | 675 | 334 | 2.8E-146 | ||
| SMART | 355 | 399 | 45 | 0.07 | ||
| ProSiteProfiles | 367 | 627 | 261 | 26.867 | ||
| SUPERFAMILY | 372 | 670 | 299 | 1.38E-54 | ||
| SMART | 410 | 449 | 40 | 1.0 | ||
| SMART | 452 | 492 | 41 | 1.3E-7 | ||
| Pfam | 454 | 491 | 38 | 0.0021 | ||
| ProSiteProfiles | 459 | 491 | 33 | 10.074 | ||
| SMART | 493 | 534 | 42 | 0.11 | ||
| SMART | 538 | 576 | 39 | 1.6E-8 | ||
| Pfam | 540 | 576 | 37 | 9.2E-5 | ||
| ProSiteProfiles | 545 | 585 | 41 | 13.416 | ||
| ProSitePatterns | 563 | 577 | 15 | - | ||
| SMART | 579 | 618 | 40 | 2.1 | ||
| SMART | 633 | 672 | 40 | 420.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Ubiquitin protein ligase activity | Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues. |
Expression pattern of LotjaGi1g1v0067500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…