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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0292500 |
| Transcript ID | LotjaGi1g1v0292500.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent zinc metalloprotease FtsH 2; TAIR: AT4G27680.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q7ZZ25|ATD1A_DANRE ATPase family AAA domain-containing protein 1-A; TrEMBL-Plants: tr|I3TAQ1|I3TAQ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0292500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:70964645..70973501) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGAGCGGCTTCAGAGAAATTGCTACAGGACATGCTGTTGTACGCTGCTAGCGCGGCTCTCAGTTGTTTGGTATTGTT CGTCGGGCTTCGCCAACTCGACCCGAATCGCGAGGCGTCGAAGAAAGCCCTTGAACATAAGAAGGAGATTGCCAAGCGTC TAGGTCGTCCCCTCATTCAAACCAACCCTTACGAGGTCCAGTGTTTTATCTTCTTTGTAAATTTCAATTGTTTATATCTG GATTAATATTTGATTTCACAGAATGATACAAGTTACTGAATTTCTTCCCGTATCAATTGTCAATATGAAATTGTTATAAT TGCATTATTTGTCTTATGCATTTGACATAAATTACATTTGTATTTCTTGCTTAGTACCAGTGTTATTTGTCCCGGATAGC GGCACGCATTAGCCAGCCCCAAGAATGCTATAGCGGTATAGCGCGTAGCAGGATGGTTGCTATGCTGAATTTTGTGTACA GTTTGTATAATTTAACTATATACATATATGAATGCTCAAGAATGATAAAGATGCTTCAAATTCATGGCACTCATAATTAA CCATAAAAAGTCTCATAGGTGTCTTATACAAAACATACAAGTACCCAAAGGAGCCAAGGTGACCAAGAAGCTTATGCCTC TAATGCTTAAACTAAACTGTCTAAAAACTTGAAAATTCAAATAGAAGTTCCATAAACAGGAATCATCTATCATCCTCTTC TAGATCCAAGTCTTCCTCTTTATCACTTTCATTGCTATCACAACTCTATATCACTTCCTCCTCTAAGTAGACTCTTTTCA ACATGTTTCTGAAGAAAAAACCTTAAATTTCCCCAGAAATGCCCGAACATAACTTTTTAAGGGCACTTTTTGGGTTTTTA TCAGTTCCAGCAAATAACGCCCAAATAGTGCCGCTATGGCTGCTTTTTCCTCCGCTATAGCAGCCGCAACAGCTGCTACT CTGAACTGCACTGCTACACTACAACTAGTTCACTAGAAGTGGCCAGGGGATGCGGAGCACTGCTACGACGCTACTTCAAC CTATTGACAACCCTGCTTACGACCCATTATTGAATTATATGCTGAGTGTCCCGGTGGGAGTAACTGGTGCTTATTAATGA TGAGCAGGTTTTGTGGGTGTTTCTAGTTTTTAGGTTGTTTAGGATAGTGATAGATTCGTTGTTCTTCCTTACTAACTCTA TTTATGTGGTATCTCTTAGACATGGTTGGTTTCTGCTACAACTTTACTAGTTGTATCTTTTCTTACTAATGACTTGGCTA ATGGTATGGCTGGGGAAGATGAGAAACAATGTGTTTGGTGTGTATTGTACTTCATTGTGTGTGTCTCTGTTATTCTCTGC CCTTTATATTACAGCTTAAGTTACTTGGTTGAAATTTGAATTATTTGAATTGGTGGAATAATTTATTATTTATTATTTGG TAGCTAACTCTAATTTAAACCGTCAAGTATAACTGCCAGTGCTAATAGTCTTCCTAGAGGGATAGGGCTTGGTCGTTGTT GGTGTACTACTCATGAATCATGATGTTTTCACGGCACTTCTACAATCAATGTGAAGATGGATTCATAAGTCTAGTCAATG GTGTACTTGGTTGAAATTTGAGTTATTTGAATTGGTGGAATAATTTTTTATTTTTTATTTGGTAGCTAACTCTAATTTAA ACCTTCAAGCATAACTGCCAATGCTAATAGTCTTCCTAGAGGGATAGGGCTTGGTCGTTGTTGGTGTACTACTCATGAAT CATGATGTTATCACGGCACTTCTACAATCAATGTGAAGATGGATTCATAAGTCTAGTCAATGGTGTTCTAAAAAGAGATT CCTCAATTCCTTATAAAGTAATCTACAATGATTTCCCAATACTGGCCGTTTTCTTCGATAGATGAAGAAATTAATTTCGG AAAACAATTCTATCCAAATAAACACAGTAAAGAAGGACTAGTTCATAACACATATCCTTTTTGGAGATATGTCCTTCCTT TATTTACTGGAATGTATTTTTAGTTTTACGATATATATTATTATTAGATCATAATTAAGTTTTATATTTATTGAATTTAT GTCCTTTTTTGTGTACAGGATGTTATAGCCTGTGATGTTATTAATCCTGACCACATTGATGTGGAATTTGGGTCTATTGG GGGACTGGAATCAATCAAGGAAGCTTTGTTTGAACTTGTTATTCTACCTCTAAAAAGACCTGACTTGTTTTCACATGGTA AGCTTCTTGGACCGCAAAAAGGGGTCCTATTGTATGGACCCCCTGGCACAGGAAAAACCATGCTTGCCAAAGCTATTGCC AAGGAGTCAGGAGCAGTTTTTATTAATGTGAGGATATCAAACCTGATGAGCAAATGGTTTGGGGACGCCCAAAAGCTTGG TAAGTGCATGTTTCTTTATTGATACTTTTACAGTAAATTATAGAACTATTTTATACAATATGCTTTAGCATCTCCAACGT TGAATTTTTTTTGTTCATAAGGACATTATGATTGTCTTAATTAAATTGACGAAAACTCATCTGGACCCTTTTTTTTCATA AATGCACGATTACACAAAGATCCAATAAACTGTCAAACACTTGTTGTTTCTTTGGGTTGAAGCACCTCTTGTGCTTCCTT TATTGTATTTGGCTTTTCAAAAAAAAAGATCCAATAAACTGTTTATGATTACTTTTCTCCTGTGTAAAAGCTTGACATGC TAGTTATTAAAACCATTGTATATAATTTCCTTTGTATTTCGCTACATGACTTGTGTGCTGCAATCTTGTTTCACTCATTG CTGGAAGTGTTATTATGTGCCATAGTAAGGTTGATTGTGCCATCTGTGATTTGAAGAGCAGTTCCAATCTATTTCCTTTC TTTTGCTTGATAAAGGATTTATTTTGTTAACCACTAACTATAAAAGTTTAATCCTAAATCTAGAATGCACAACTAAAATT ATGTCTAGACTCTTAGTGTGTGCTTGGATAGAGAATTTTAAAAATCAAGAGAAATTTTAATTCTAAGAAATTGAATATAT CAATTAAATTCCTTGAATTCATAAAATATCTTGTTTGTATAAAACCTTGCCTTTCTAAAATTGATGAAGTCCTGAGCGTC AAGAGCAAGAGACATGACGGGGTGGAGAGTTACTCGTTGTGCATCTCCCAGAGAATTTGCATTTTCCTTATTGCGAGATG TTGTTTCAAATCCTGTACATTTAGCTAAACAAAATACTTGATATAAATCCTGTCATTTTTATAATTCCACAAATATCTAA ACAGTATATTTTATTACAAATCATTTTAATTACCCTTTTTAAATGCATTGCCTCCTGAAATTACTTCATCCAAACACTCT TAGATGTTGGTTTACTGGATTACCTTGAGAGGACAAATATGACAACCATTGTTAGTTTGAGTCAATCACAATCAGAAATT CTGCATTATTTAGTGACCGAGTGAATATTCTATTCCCTTGCAGTTCCTCCGTGCCACTCTGTCAGATTAGAGTAGGATTC TCTCCTCAGGTATATTTAATACTATGGACTATGGTTTAAAGGTCATTGTTGTAAGTAAGCCCATACATAGGACCCAATAT AATATCCACCTTTGAGTAATGCTTAATAATAGTACAGCTAACAATCCCAGTCACTTTATTTAGTCTTTACAAAATGCCCT AATTAATTTTGATGAACAGAACTGCACAAATTATAGGTGGATTAAACCCATAGGTCATATTATGAAGCTATGGGAGAGGG TAATTGAACAAAGATTACGGCAAGAGAAACTTCCGTACAAAACAAAACAATTTGGCTTTATGCCAAGGAGTTCAATATTG AAAGCAAGATACTTACAATGGAGATTTTTTTTTTTTGATAAGCACAATGGAGATAATAGTGTGGTATCCTACGAGGAATG AAAAATACTCGCACATGGATTTCGAGCGTAATTGGTTCTCTAGGGAGATATTGTGTAAGGCCGTGGAGAGAAGAGTTTAT ATTGCCTTAATTCGAGCGCATTATATGTATGATGGGGTTATGACAAGTTTGAGAACACAAGGTGAGCAGAGAGCACTTTC CTAGTAACTATGAAATGCACCATGGGTCAACTTGAGCCTTTATCTTTTTACCAGTGTTTTGGATGTGCTTTTTGAACGTA TCCAAAAGCCCAGATGACATGATGCATGCTTTTGCAATGATAATCCTAGTTAGATAGCCAAGAGAAGAAATAAAAATGAA CCTAGAAATGTGGAGACATGCTGTTATCCAGTAACTTGTTCAGAAATATTGTAATGAAAGGAATATAGGAGTTTGCCACC ATTTATTTACCAAATAGGATTGTTCAGTTCTTATAGAACCTATCAAAAGGACATGGTTTTTGTTTAAGAAGGATTAAGTG AAGTATATGGGATTTCACTTTAAGCAAAAAGGTCCATTGCTAATAGCATAGAGGTGATAATTAAAAATTGGAGTTATACC TGACCTGCAAGTCACATGATTTAATTATCCTGGGCCTATCATATAAAATTATGGGAGTATACAGGGTGATGTAGACCTAA GGGAAAATTTATAAGATTAAGGGAAAATTTTACCGCACAACTATAAGAACTACGATGTTGTATGGGATTGAATGTGTGGT AGGCTAATTAGAAAATAAACTCAATGTTGCAGATATGAGAATATTTTGATGGACGAGTGGACATGAAGTCTAGGATATGA TTAGAAATGAATGCATTAGAGAGGAAGTTAAGATTAACATTTATATTTTGAAAGATTGTCGAATTTTGTCTTCAGTAGTT TACAGAGATTGAGAAAAACCATAGGTCAAACCATAAGAAAGGTATTCGATAGACTTAGACATGATTTACGATAGGATATT ATGACATCACTTGATCTATGTAGGCAATGTAGCCAACTCCACATAATAGAAAAAGGATTTTGTGTTGTTGATTTAATCAA TTTTAACCTCCAGTTAGCATTTACCCATTTGGACAGCACGTCAAATTTTAAAAATATTTCCAGATCAATGAAACAATGTG TGAACAGAAGAAGATTGGACATATTAGCCAGCACTCAACAAGTTACCCAAGGTGGAACTACGAATTTACTGACATTGTAG AAAATCATACTTGATAGGAGTACTGACATCATATATTAAGATGCGCATGTCTTGGGTATGGTAGTCGGAAGGGCCATAGG GAAATTATCCTGTTAAGATAATAAAGACCTTAGAAGTAGTAGTTTAAACATCAGCATGCTGCTATTTGAAGATAATGATA TTTGACTGAAAAATTAGTTTAACATCTTTAAGTGTAAATTTTTTTAACACATTACAATAGATGTCAAAGAGGTCTCCTGT TGTCCCAGTATCTTCATTTTTAGAGAAGTAAATCTTTTTCTCCCATGGTTGTGAAGTGAGAACAACCGTTGTCATCATCT AGATGCTTTACTAATTATTTAGTTTCACTGCAAAAGGTTATAGTTGCTACTTCCATCAGGTGGAAAACCCTACATTCAAT AATATTTATATGACAGATAACCCCTGTCAAAGACCTGATAAGTCTTATTGACTTGTTATTATGGTTGAAGTTTTATGGAT ATCTTGTATGATGATATTATTATATAATCTTTTGAGTTTATGAATTCGAAATTATGTGCATTGTTGATGCTTTTAGGTTG TCCTCTGTTAGAATATAATATAAAACCATTCATGTGGCCCTTACCCATCAGCTTAAGCTTTTGGGATAATCGGTTGCTTG ACATGGTATCGGAGCCTCTATGACCGAGAAGTCTAGAGTTCGATCCTTGCTCCCCTCACTTTCTAATTAAAAAGTGGAAT TTAATTAAGCACGTGGTAGGTGGGTCTGCGCATTTATCCACGCTTCAAGCCCAAATGGCTCTTGCGTGAGGAGGCGTGTT AGAATATAATATAAAACCATTCATGTGGCCCTTACCCAACAGCTTAAGCTTTTGGGATAATCGGTTGCTTGACATCCTCA AAATCACGTATATGTATAATACGGTTCATTAACCAGCATCAAGGAATTTTTATGTTCATACTTATCTAGATATTTTGTGT ATTTAGTTATTTTAGCTTCTTGATCATTCTTGCGTTGTCTTACATTTATCAGAATTTGTTGTCATATATTTGTAATGTGC TGTATGCCTGTATCCATGACCCGCGCCAATATTGATGTTTTTAGTTTTTACTATACATTGGCAATATATTGAACAATGAG GAAAATATTCATGGGTCATGGCAATTTATTTAGATTGGGAGTTGTCTTGAGAAAGAAATATGTAGGTAATAGTTATAGCA TGCAAGTGCATCATTCAACTTGTATTTTTGGCTTTCTATTTCTTAATAGGTTGGTTTGACAAGTTGACATCCACGTTAGT TGTACTATGAAAAGAGATGTTCTTTCTAACTGATGTGTCAATCTGTTTCATGGATGATTTTCTGTATTTTTTTAATGGCA ACCTGTTCTGAGATTTATAGTGGTCTGTCATTGTTAAAATGAGCTTATAGCAGATCAAATAACATTTGAAAGTAGAAGTG AAGTTACTAGCATGGGAACCAATCTGGTCCTAAAAAGGATAACCGGCCCCTGTTGGTCTACTTGTGAAAGCCGAAAAAAT AACAAGGCCAGAGAAAGTGGCAGGAGATATGGTTTAGTGGTGGGAAGAGTTAGTTAGGGAGAGAGAATGTAATAAGGGAA GGGTGTAGTTCTGTTATATAGGGAATAGAGTGAATATATTATATATGATGCACGAAAGTCATTTTTCTGTTATTAGTGGG GAACCAAGGGGTCACATCCTTGGTGCATCTCTGCTCTTTAGCGTGTTCCCTTTTTCATTGAATAGTAATACATGCAACGA CGGATCCACGTGAAACACTATGGGGTCAAATGCCCCCACCATTTTTTTGGAATAAAAAAGTTTCACAAGAGTAATAAACT AGCAAAAGACTAAATTAAGCCCCCAGCACCAATAGTATACCAATAGTATGCCCCCACGTAAAAGTTTTTCTTCATGTGCT ACATTGAATGCCCCCATAGTATTGGTTTGTTGGATAATGGATAAATTTTAGAGGAGTGCAAACTATACTTACAAACTATA CTCTTTTTTTATAGTAATAATGTATTTTTAGTGCTATAAGTTTATATGTATAACTTTCAAAAAAAAATTATACGTATAAG TTGCCCCCACAGCTTAAAATTTCTGGATCCGTCACTGAATACATGCATACTGTTTCAGGATTATTTTATTCCCATCATGA AGCCCTTTCCCTCCACCTAATTTAGGATGTTTGACAAATTTATGTAGCTGCTAAAGGCTTACAATCGGTCAGGATTGTGC TCTTTTCTGAAAGAAGTTATTTTAAGAACAGTTTTTTTTTTAAATAATCATTTATAAGGTTAAATATCACAAACTATTCC TGTTTTAGAACGAGTTAAAGGATTCCCTTATATGTTGCTGCTGGCTGAGTTTGTCCCCCGTGCATGTTACCTTGCCTTGA GTTACCGTGAGGGTGTATAGTGATGGCCACATCAGTATATGTTCTCTAAATATTGTGGATGAGCAAATGTGGTTGTTTGC TTGAAGGTCGAAGCCCTGTTCAGCCACATATTGGTAAATAATATGGTCTAAATTCTTCATCAGAAATGTTGGTTAACAAG GGTACCTTGGAATTCGTAACTAACTAACTATGCGTATATTTCTTAAGCCCCCACTTTGTGATTCTAGAATATAAATTTGC CTAATTGTTATTGTGCATAATTGGTTTGTATCATGAAATCAACCTCTTGTAATGCCAGGCAGATTGCCTACTATGATCCA TAATGAGTTTGGTCTTTCACTCTTTCCAGACTTCGCCATGACTGAAGCTTTATAACACCAAGTTTCCCTGCTTATTGCGC TTAATTATGCTCTATGTTCTTTATCTGAATGGCAGTTCTTTCTTTTGGTAGACTGTTAATAATATTCTGATGTTCTTCTG CAGTTGCTGCTGTATTTAGCTTGGCTCATAAACTCCAGCCTGCCATCATATTCATTGATGAAGTTGACAGTTTTCTGGGT CAACGTCGAACAACAGATCATGAAGCTTTGTTGAACATGAAAACTGAGTTCATGGCTCTTTGGGACGGATTTACCACCGA TCGTAAGTTTTAAGACTCATTATCATGTTATTTTCTTCAGTTGCGTAGACATTCAATATAAGTTGCACATGGGTGACAAT TTCAATGGAGATTCAGTAACTTGGTAATTTTGTTATCTATATTTGAGTAAACTAGTTAATTATGATGACTGCATTTTTGT GCTCTTGTAGAGAATGCTCGAGTTATGGTCCTTGCAGCTACTAATCGTCCTTCAGAACTTGATGAAGCAATACTTCGACG GCTTCCTCAATCCTTTGAAATTGGAATGCCAGACCAGAGTGAGAGGGCAGAGATATTAAAGGTTATCTTAAAGGGTGAGA GGGTTGAAGATAACATAGACTTTGGTCACATAGCTGCCCTATGTGAGGGTTACACTGGTTCAGATCTATTTGATCTATGC AAGAAGGCTGCCTATTTTCCTATTAGAGAACTTCTCGATGATGAGAAGAAAGGGAAACGATCTCCTGTTAGTACATTTCA CTCTCTTCCGGTTGCTTTACCTTAATTTCTTTATTTTGCCAATAGTGAACAGTACCATTACCATCTACTGCTGATTTGGC TAGAATGCAATTCCTTGTCAGTTTCAATTTCTGTTAACTAAAAGAGAAGATTTTTTTTAGTGCAAAGTATTTTATTTGAA ACTATACTGTGCACTCAAAGTTATAGTTGCATGACTAGAAGCATCTCTGGTCAATAA
CDS sequence (LotjaGi1g1v0292500.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGCGGCTTCAGAGAAATTGCTACAGGACATGCTGTTGTACGCTGCTAGCGCGGCTCTCAGTTGTTTGGTATTGTT CGTCGGGCTTCGCCAACTCGACCCGAATCGCGAGGCGTCGAAGAAAGCCCTTGAACATAAGAAGGAGATTGCCAAGCGTC TAGGTCGTCCCCTCATTCAAACCAACCCTTACGAGGATGTTATAGCCTGTGATGTTATTAATCCTGACCACATTGATGTG GAATTTGGGTCTATTGGGGGACTGGAATCAATCAAGGAAGCTTTGTTTGAACTTGTTATTCTACCTCTAAAAAGACCTGA CTTGTTTTCACATGGTAAGCTTCTTGGACCGCAAAAAGGGGTCCTATTGTATGGACCCCCTGGCACAGGAAAAACCATGC TTGCCAAAGCTATTGCCAAGGAGTCAGGAGCAGTTTTTATTAATGTGAGGATATCAAACCTGATGAGCAAATGGTTTGGG GACGCCCAAAAGCTTGTTGCTGCTGTATTTAGCTTGGCTCATAAACTCCAGCCTGCCATCATATTCATTGATGAAGTTGA CAGTTTTCTGGGTCAACGTCGAACAACAGATCATGAAGCTTTGTTGAACATGAAAACTGAGTTCATGGCTCTTTGGGACG GATTTACCACCGATCAGAATGCTCGAGTTATGGTCCTTGCAGCTACTAATCGTCCTTCAGAACTTGATGAAGCAATACTT CGACGGCTTCCTCAATCCTTTGAAATTGGAATGCCAGACCAGAGTGAGAGGGCAGAGATATTAAAGGTTATCTTAAAGGG TGAGAGGGTTGAAGATAACATAGACTTTGGTCACATAGCTGCCCTATGTGAGGGTTACACTGGTTCAGATCTATTTGATC TATGCAAGAAGGCTGCCTATTTTCCTATTAGAGAACTTCTCGATGATGAGAAGAAAGGGAAACGATCTCCTGTTAGTACA TTTCACTCTCTTCCGGTTGCTTTACCTTAA
Protein sequence (LotjaGi1g1v0292500.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGAASEKLLQDMLLYAASAALSCLVLFVGLRQLDPNREASKKALEHKKEIAKRLGRPLIQTNPYEDVIACDVINPDHIDV EFGSIGGLESIKEALFELVILPLKRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFG DAQKLVAAVFSLAHKLQPAIIFIDEVDSFLGQRRTTDHEALLNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAIL RRLPQSFEIGMPDQSERAEILKVILKGERVEDNIDFGHIAALCEGYTGSDLFDLCKKAAYFPIRELLDDEKKGKRSPVST FHSLPVALP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 23 | 23 | 5.0 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 4 | 317 | 314 | 8.1E-204 | – | |
| PANTHER | 4 | 317 | 314 | 8.1E-204 | – | |
| Phobius | 12 | 30 | 19 | - | – | |
| TMHMM | 13 | 30 | 18 | - | – | |
| Phobius | 31 | 329 | 299 | - | – | |
| Gene3D | 79 | 251 | 173 | 5.4E-85 | – | |
| SUPERFAMILY | 81 | 307 | 227 | 1.41E-55 | ||
| CDD | 86 | 250 | 165 | 7.7869E-23 | – | |
| SMART | 117 | 253 | 137 | 3.3E-15 | ||
| Pfam | 121 | 250 | 130 | 8.6E-36 | ||
| ProSitePatterns | 223 | 242 | 20 | - | ||
| Gene3D | 252 | 316 | 65 | 5.4E-85 | – | |
| Pfam | 273 | 308 | 36 | 2.3E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi1g1v0292500.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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