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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0444700 |
| Transcript ID | LotjaGi1g1v0444700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT5G01550.1 lectin receptor kinase a4.1; Swiss-Prot: sp|Q9M020|LRK63_ARATH Lectin-domain containing receptor kinase VI.3; TrEMBL-Plants: tr|A0A0B2S8Y5|A0A0B2S8Y5_GLYSO Lectin-domain containing receptor kinase VI.3; Found in the gene: LotjaGi1g1v0444700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:94233064..94235511) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTTTATATCTCTTAGTTTTGCTATATTCTTCAAAATTATCATGGCTTCAACTCTTCTTTGTTTTCTCCTATTTCTCC CACTTCTAGACCATGTTTCTGCCAATTCTTTTCTCTTTGAAGGATTCAATAACAATAGCAAACTCACCCTTGAAGGAGCC TCTGTTATCAAAACCAGTGCTCTACTTAGACTCACCGACAGATCAACCAACATAGTAGGTCATGCATTCTACAAAACACC ATTCAAAATGCTTAACAAAACAAACTCTTCACTCCAACCAAATGCTTATTCCTTCAGCACCTACTTTGTTTTCTCAATTG TGTCCCCAAGATCAGGCTCTGGTGGCTTCGGCCTCGCCTTCACCATAGCACCGTCAACAATTTTTCCGGGCGCCGAGGCC GGCCATTTCCTCGGCCTTGTTAACTCCACCAGTGATGGGGACTCCTCAAACCACATATTAGCAGTTGAGTTTGACACGGT GAATGGCTACAAAGAAGACTCTGACACTGAAGGAAACCATGTTGGTGTCAATGTGAATGGCATGAACTCAAAAATTACTG AGCCAGCTGCATACATTGAAGCTGGGACAGATAGTAATGTGAAGGAAGATTTCAGAATGGCAAAGGTTGATGCTGTCCAA GCTTGGATAGAATATGATAGCAAAAGCAAAACTCTGAATGTAACAGTAGCTCCCCTACCATTACTAAGACCAAACAAGCC ACTTATATCTTATCCTATTGAGCTTAACACAGTTTTTAAGGAAAACATGTATGTTGGTTTCTCAGCTTCAACAGGGAGCA AGGAAACAAGCTTTCATTATATATTGGGATGGAGTTTTTCAGTGAATGGAGATGCTCCTTTATTAAATAATTCTGAGCTT CCAAATCCGCCACCAAAGGAGCAAGATCCATCATCTTTTCCTTGGGTCAATCTTGCAATTGGAACCTTGTGTGTTCTGAC CTTTACCTTGTTGTGTCTCTTGCTTTATCAAACATTGTGTAAGAGATACATGAGATTTGAGGCTCTTGAGGATTGGGAGA TGGATTGTCCTCACAGATTTAGATACAAAGATCTTCACACCGCAACAAAGGTAACATAGAATCTGCCTATAACAGAAACT ATATCTCTATGCTTAGGAAAAATATGTTACAAGTAATTAGGAAACTAAGTAATTACGATTATACTATTAAATTAGGATTA TAGGGTATTTTAGATTAGCTTCCATATCTTTCTTAATATGTTTGCTTATTTGTTCAGATATAGGTAATCCACTAATCCTT ATATATTAGTATAGATAACTTATATATTAGAATAGATAAGGATCAGTATTTTATTTCTCATTATTTCTTTACTTAGACAC TAATCCTTATAATTTTATCAAAGGGGTTCAAAGAGAGCCAGCTAATTGGAGTTGGAGGCTTTGGTGCTGTGTACAAAGGC GTGTTACCAACAACAGGAAGTGAGGTTGCTGTTAAGAGGATTGTGAGAGGCCCTATCCATGGGATGAGGGAATTTGCAGC TGAGATTGAAAGCTTAGGGAGATTGAGACACAAGAATTTGGTGAATCTTCAAGGGTGGTGCAAGAAAAAGAATGATCTAC TTTTAATCTATGATTTCATCCCAAATGGTAGCCTTGATTCTATTTTATATAATTCCAATTGCAATTTTGTTTTGGATTGG GGACAAAGATTCAAAATTCTCAAAGGCATCACTGCAGGGCTATTATACCTGCATGAAGAGTGGGAGCAAGTGGTTATCCA TAGAGATGTGAAAACTAGCAACATTCTAATAGATGGAGATTTCAATGCTCGTTTAGGTGACTTTGGACTAGCAAGAATCT ATGATCATGATCAAATATCACACACAACCAATGTGGTTGGCACAATTGGGTACATTGCACCGGAGTTAACTCGCACCGGA AAGTCTTCAACAGAATCAGATGTGTATGCTTATGGGGTTGTGCTCCTTGAAGTGGTTACAGGGAAGAGACCTGTTAGCTC AGATCAATTTTTCTTGGTGGATTGGGTTGTTGAAAATTACCAATTGGGTCAGATTCTTGAGGTGGTTGATCCTAAGCTGA ATTCAGTTTATGATTTGGAAGAAGTGGAGTTGGTTCTGAAATTGGGTCTCCTCTGCAGTCACAACATAGCAGATTATAGA CCTACCATGAAACAAGTTACAAGGTACTTGAACTTTGATGACCTTCTTCCTGATATTAGTGATTGGAGAAGGAGTGTTTC TGAAAGCAGCAGTCTGAGCTTAGGATTCTTAGAAGCCACTTCTATGATGAGTGTGGGAACATCAAAGAATTTGTCCTCCA TAGATATCATGAGTACAAACTCCATAGATGCTGGTAGATAGCAAGAATCATATTAGTTATATGACTACCTTCACTTCTAT GTATCTATCTAAGTATTTGTATAGTCTAGTAAAATATTTTAATTGATA
CDS sequence (LotjaGi1g1v0444700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCAACTCTTCTTTGTTTTCTCCTATTTCTCCCACTTCTAGACCATGTTTCTGCCAATTCTTTTCTCTTTGAAGG ATTCAATAACAATAGCAAACTCACCCTTGAAGGAGCCTCTGTTATCAAAACCAGTGCTCTACTTAGACTCACCGACAGAT CAACCAACATAGTAGGTCATGCATTCTACAAAACACCATTCAAAATGCTTAACAAAACAAACTCTTCACTCCAACCAAAT GCTTATTCCTTCAGCACCTACTTTGTTTTCTCAATTGTGTCCCCAAGATCAGGCTCTGGTGGCTTCGGCCTCGCCTTCAC CATAGCACCGTCAACAATTTTTCCGGGCGCCGAGGCCGGCCATTTCCTCGGCCTTGTTAACTCCACCAGTGATGGGGACT CCTCAAACCACATATTAGCAGTTGAGTTTGACACGGTGAATGGCTACAAAGAAGACTCTGACACTGAAGGAAACCATGTT GGTGTCAATGTGAATGGCATGAACTCAAAAATTACTGAGCCAGCTGCATACATTGAAGCTGGGACAGATAGTAATGTGAA GGAAGATTTCAGAATGGCAAAGGTTGATGCTGTCCAAGCTTGGATAGAATATGATAGCAAAAGCAAAACTCTGAATGTAA CAGTAGCTCCCCTACCATTACTAAGACCAAACAAGCCACTTATATCTTATCCTATTGAGCTTAACACAGTTTTTAAGGAA AACATGTATGTTGGTTTCTCAGCTTCAACAGGGAGCAAGGAAACAAGCTTTCATTATATATTGGGATGGAGTTTTTCAGT GAATGGAGATGCTCCTTTATTAAATAATTCTGAGCTTCCAAATCCGCCACCAAAGGAGCAAGATCCATCATCTTTTCCTT GGGTCAATCTTGCAATTGGAACCTTGTGTGTTCTGACCTTTACCTTGTTGTGTCTCTTGCTTTATCAAACATTGTGTAAG AGATACATGAGATTTGAGGCTCTTGAGGATTGGGAGATGGATTGTCCTCACAGATTTAGATACAAAGATCTTCACACCGC AACAAAGGGGTTCAAAGAGAGCCAGCTAATTGGAGTTGGAGGCTTTGGTGCTGTGTACAAAGGCGTGTTACCAACAACAG GAAGTGAGGTTGCTGTTAAGAGGATTGTGAGAGGCCCTATCCATGGGATGAGGGAATTTGCAGCTGAGATTGAAAGCTTA GGGAGATTGAGACACAAGAATTTGGTGAATCTTCAAGGGTGGTGCAAGAAAAAGAATGATCTACTTTTAATCTATGATTT CATCCCAAATGGTAGCCTTGATTCTATTTTATATAATTCCAATTGCAATTTTGTTTTGGATTGGGGACAAAGATTCAAAA TTCTCAAAGGCATCACTGCAGGGCTATTATACCTGCATGAAGAGTGGGAGCAAGTGGTTATCCATAGAGATGTGAAAACT AGCAACATTCTAATAGATGGAGATTTCAATGCTCGTTTAGGTGACTTTGGACTAGCAAGAATCTATGATCATGATCAAAT ATCACACACAACCAATGTGGTTGGCACAATTGGGTACATTGCACCGGAGTTAACTCGCACCGGAAAGTCTTCAACAGAAT CAGATGTGTATGCTTATGGGGTTGTGCTCCTTGAAGTGGTTACAGGGAAGAGACCTGTTAGCTCAGATCAATTTTTCTTG GTGGATTGGGTTGTTGAAAATTACCAATTGGGTCAGATTCTTGAGGTGGTTGATCCTAAGCTGAATTCAGTTTATGATTT GGAAGAAGTGGAGTTGGTTCTGAAATTGGGTCTCCTCTGCAGTCACAACATAGCAGATTATAGACCTACCATGAAACAAG TTACAAGGTACTTGAACTTTGATGACCTTCTTCCTGATATTAGTGATTGGAGAAGGAGTGTTTCTGAAAGCAGCAGTCTG AGCTTAGGATTCTTAGAAGCCACTTCTATGATGAGTGTGGGAACATCAAAGAATTTGTCCTCCATAGATATCATGAGTAC AAACTCCATAGATGCTGGTAGATAG
Protein sequence (LotjaGi1g1v0444700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASTLLCFLLFLPLLDHVSANSFLFEGFNNNSKLTLEGASVIKTSALLRLTDRSTNIVGHAFYKTPFKMLNKTNSSLQPN AYSFSTYFVFSIVSPRSGSGGFGLAFTIAPSTIFPGAEAGHFLGLVNSTSDGDSSNHILAVEFDTVNGYKEDSDTEGNHV GVNVNGMNSKITEPAAYIEAGTDSNVKEDFRMAKVDAVQAWIEYDSKSKTLNVTVAPLPLLRPNKPLISYPIELNTVFKE NMYVGFSASTGSKETSFHYILGWSFSVNGDAPLLNNSELPNPPPKEQDPSSFPWVNLAIGTLCVLTFTLLCLLLYQTLCK RYMRFEALEDWEMDCPHRFRYKDLHTATKGFKESQLIGVGGFGAVYKGVLPTTGSEVAVKRIVRGPIHGMREFAAEIESL GRLRHKNLVNLQGWCKKKNDLLLIYDFIPNGSLDSILYNSNCNFVLDWGQRFKILKGITAGLLYLHEEWEQVVIHRDVKT SNILIDGDFNARLGDFGLARIYDHDQISHTTNVVGTIGYIAPELTRTGKSSTESDVYAYGVVLLEVVTGKRPVSSDQFFL VDWVVENYQLGQILEVVDPKLNSVYDLEEVELVLKLGLLCSHNIADYRPTMKQVTRYLNFDDLLPDISDWRRSVSESSSL SLGFLEATSMMSVGTSKNLSSIDIMSTNSIDAGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 22 | 22 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| PANTHER | 5 | 664 | 660 | 0.0 | – | |
| PANTHER | 5 | 664 | 660 | 0.0 | – | |
| Phobius | 16 | 20 | 5 | - | – | |
| SUPERFAMILY | 19 | 284 | 266 | 3.17E-67 | ||
| Gene3D | 19 | 274 | 256 | 2.8E-68 | – | |
| Phobius | 21 | 293 | 273 | - | – | |
| Pfam | 21 | 279 | 259 | 9.4E-74 | ||
| CDD | 22 | 269 | 248 | 2.30126E-86 | ||
| ProSitePatterns | 139 | 145 | 7 | - | ||
| TMHMM | 292 | 314 | 23 | - | – | |
| Phobius | 294 | 315 | 22 | - | – | |
| Phobius | 316 | 674 | 359 | - | – | |
| Gene3D | 318 | 427 | 110 | 3.8E-29 | – | |
| SUPERFAMILY | 334 | 628 | 295 | 9.29E-79 | ||
| SMART | 351 | 618 | 268 | 1.8E-34 | ||
| Pfam | 351 | 614 | 264 | 2.5E-47 | ||
| ProSiteProfiles | 351 | 620 | 270 | 38.563 | ||
| ProSitePatterns | 357 | 380 | 24 | - | ||
| CDD | 357 | 619 | 263 | 1.15656E-93 | – | |
| Gene3D | 428 | 623 | 196 | 7.3E-57 | – | |
| ProSitePatterns | 473 | 485 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi1g1v0444700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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