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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0483900 |
| Transcript ID | LotjaGi1g1v0483900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein, putative; TAIR: AT1G65380.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|O80809|CLV2_ARATH Leucine-rich repeat receptor-like protein CLAVATA2; TrEMBL-Plants: tr|F7J695|F7J695_LOTJA Leucine-rich repeat receptor-like protein; Found in the gene: LotjaGi1g1v0483900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:99733139..99736616) extracted from Lotus japonicus Gifu genome v1.2.
GTAGAACACAAGAAAAGAGTGGTAAAAAAGTAAAGGAAAAGTGTGATAAAGAGAGGGAAGAAAGCACATCAAAGCCACTT TACTTTTCTGATCTCCATCTAAACTAAACCCTTCACTCTCACTTCATCACTAACCTAAGTCCAGTGTTCTCTCTTTTCTT CTTTGATTCTTTCCATTTTCTTAGCTTGTTCTGTCTTTCTTTCTCATATTATTCTCATGCATCCATTTTAATCTCCCCAA GGTCCTCTTTTGCCTCAAGATTCCACCATTACTCTCATGTTCATGGAAAACTCCATGCCCCACCATCGTTTTTACCATCT ACTCACACTCCTCTGTTTGATTTTGCTGTGTGTAACACCCTCCAACTCAATTGATATCCACCCACAAGACAAAGCCTCAC TTTTGAAGTTCAGGGCATGGCTGCAATACCCCAACCAGAGTTTGCCCAACTGGGTAGGTTCCAACTGCTCTACATGGAAT GGAATCACCTGTGACAACAGCACTGGCAGGGTGATTTCCATTAACCTGACCAACATGAACTTGTCAAGCCAAATCCACCC CAGTTTCTGTAACCTTTCATATCTCAACAAGGTGGTTTTGTCCCACAATAACTTCACATGCCCTCTACCTGTTTGTTTTG GGAACTTGCTTAACCTTAAAGCCATTGATCTCAGCCACAACCAGTTTCATGGTGGAATACCAGACTCTTTCATGAGGCTG AAACACCTTACTGAGCTTGTTTTGAGTGGGAATCCAGATTTGGGTGGTCCACTGCCTTCTTGGATTGGTAATTTTTCTGC AAATTTGGAAAGGCTTCATCTTGGTTTCAGTTCACTCAGTGGGGTTATACCTGAGAGCTTGCTTTACTTGAAGTCTCTCA AGTATTTGGACCTTGAAGATAATCTCTTGTCTGGTAATCTGGTTGATTTTCACCAACCTTTGGTTTTTCTCAATCTTGCT TCCAATCAGTTATCAGGTACTTTGCCTTGCTTTGCAGCTTCAGTTCAGTCCCTAACTGTGTTAAACTTGTCTAACAATTC TATTGTGGGGGGATTACCTGCTTGTGTTGCTTCATTTCAAGCTTTGACTCATCTGAACCTATCAGGGAACCACTTGAAGT ATAGAATATATCCTAGGCTTGTGTTCTCAGAGAAACTTCTTGTTTTGGATTTGAGTAACAATGATTTTTCTGGTCCTATT CCCAGTAAAATTGCAGAGACAACAGAGAAACTTGGCCTTGTTCTTCTTGACCTTTCCCACAATCAATTCTCTGGTGAAAT TCCTGTGAAAATTACTGAGTTGAAAAGTTTGCAGGCCTTGTTCCTTTCTCACAATCTTCTTTCAGGAGAAATTCCTGCTA GAATTGGAAACTTGACTTATCTTCAAGTTATTGATCTCTCACACAACTCTTTGTCTGGTACCATTCCATTCAGTATTGTT GGATGCTTTCAGCTGTATGCTTTAATACTTAATAACAACAATCTTTCTGGTGTGATTCAACCTGAGTTTGATGCATTGGA TATCTTGAGGATACTGGATATAAGCAACAACGGGTTTTCTGGTGCTATTCCACTCACTTTGGCTGGATGCAAATCTCTGG AGATTGTAGATTTTAGGTCCAATGATCTTTCTGGATCCTTGAATGATGCAATAACCAAGTGGACAAACCTCAGGTATCTT TCTCTTGCTGAGAACAAGTTCAGTGGCGATTTGCCTAGTTGGTTGTTCACGTTCGAATCAATAGAAACAATGGATTTCTC TCACAACAAGTTTTCTGGCTTCATACCTGATATTAATTTTAAGGGTAGCTTAATATTTAACACAAGGAATGTCACTGTTA AGGAGCCACTGGCTGCACCAAAAGAGTTTCAACTCAGAGTTTCAGCTGTTGTTTCTGATAGCAATCAACTTAGTTTCACT TATGATCTCTCATCAATGGTTGGAATCGATCTATCCAGCAACTTGCTACATGGGGAGATTCCAAGGGGCTTGTTTGGCCT AACTTCCCTAGAATACATGAATTTGTCTTACAATTTTCTAGATGGACAGCTTCCTGGTTTGCAGAAAATGCAGAGTTTGA AAGCCTTGGATTTGTCACATAATTCTCTGTCAGGACATATCCCAGGAAACATTTCTACCCTTCAAGGTCTTGCGGTCTTG AATCTATCTTACAACTGCTTTTCTGGATATGTTCCCCAGAAGCAGGGGTATGGAAGATTTCCTGGTGCATTTGCTGGGAA TCCAGATTTATGCTTGGAATCTTCAAATGGAATATGTGATGGTGGAAGGACTCCATCCGCGCGAGGAACATCTTTTGGGG AAGATGGGATGGATGGACCAATATCTGTGGGGATTTTCTTTATCAGTGCCTTTGTTAGTTTTGATTTTGGAGTTGTTGTT CTCTTCTGTTCTGCTCGAGCAAGAAACTACATTCTCCATACTAAAGTTTGATTTGGTGCTTCTTGTTACAATGACTAACT TTCTCATGTAAATTCCATTGTGATTTGGTAGCTCTCTTCTTGTTTCAAGTGAACATACACATTCTGTGATTGGGAATATG ATCTCACCATCAACTTCATTGGTGTTCTCTTCCAACCTAGTCCTCAACTCATTATTGCTGAAAAAGTTGTTACAGAAATT ACAGGATCAAATGGCATGAAATTGATGTGTCTCAAATGGTTTAAACAACATCATTGACTCTGGCCTTATTTATTTTACTA AAGACTAGTTTTGCATCACTCATCAAGAAGGGAAAGTGATGGTGAAAGTTTGATCTGAGTGAATACAAGCCTTGCATCAT TCAGTTGGTTATCTTTTGCTAGAGCTCGGTTGCTCGAATTTAGAATGGTCACCATATTCATTTAGATACCATGTTATTTA TAAGGGAAAGTTGTAGTGACCTCCCCTTTATTCCCTTTATTATTTAATCAAACACTGATCATCATTTTGTTAAGGACATT GCACGATCTCGCTCGGAGTTTATTGTTATTGCACTGATCTCCTATGAGATTTATCATTATAACACTAAGCATCTCTATTA TTCTAAATGGTGTATGAAAGATAGAAGGTCAATGCAATAATAATAAGCCTCAAAGGGAGGTTAGTGAAATTTGCCTTATG TCTAGTCATGGTGAAATTTTGATGTTGCTCATCATTGCAGTCATGTTTGTGTGAGAACATTTATCAATCAAGATTAATCT TCTTTGAGTTAGGGAGCCAAAATTTCCCTTTAGTATTGTTTTACTTAAGATTGTAAATTGATTAGTATAATGAGGACAAG ATAAGTGGAGTAGGTATAAATATAAGGATTTTACCATCTTCACGCCTTCCTCTTAAGTCTTGATGAAATGATTTTAAATG TTGAAACTTTTTCATTGTCAACAGGAACGAGGTTTACTGATCAACTCAAAGCATGTTTAGAAACACAGTGAAATCACGTT TAAAAGCCAAAATTTTGAGAGTTCATGTGAGTAACGTC
CDS sequence (LotjaGi1g1v0483900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCATGGAAAACTCCATGCCCCACCATCGTTTTTACCATCTACTCACACTCCTCTGTTTGATTTTGCTGTGTGTAAC ACCCTCCAACTCAATTGATATCCACCCACAAGACAAAGCCTCACTTTTGAAGTTCAGGGCATGGCTGCAATACCCCAACC AGAGTTTGCCCAACTGGGTAGGTTCCAACTGCTCTACATGGAATGGAATCACCTGTGACAACAGCACTGGCAGGGTGATT TCCATTAACCTGACCAACATGAACTTGTCAAGCCAAATCCACCCCAGTTTCTGTAACCTTTCATATCTCAACAAGGTGGT TTTGTCCCACAATAACTTCACATGCCCTCTACCTGTTTGTTTTGGGAACTTGCTTAACCTTAAAGCCATTGATCTCAGCC ACAACCAGTTTCATGGTGGAATACCAGACTCTTTCATGAGGCTGAAACACCTTACTGAGCTTGTTTTGAGTGGGAATCCA GATTTGGGTGGTCCACTGCCTTCTTGGATTGGTAATTTTTCTGCAAATTTGGAAAGGCTTCATCTTGGTTTCAGTTCACT CAGTGGGGTTATACCTGAGAGCTTGCTTTACTTGAAGTCTCTCAAGTATTTGGACCTTGAAGATAATCTCTTGTCTGGTA ATCTGGTTGATTTTCACCAACCTTTGGTTTTTCTCAATCTTGCTTCCAATCAGTTATCAGGTACTTTGCCTTGCTTTGCA GCTTCAGTTCAGTCCCTAACTGTGTTAAACTTGTCTAACAATTCTATTGTGGGGGGATTACCTGCTTGTGTTGCTTCATT TCAAGCTTTGACTCATCTGAACCTATCAGGGAACCACTTGAAGTATAGAATATATCCTAGGCTTGTGTTCTCAGAGAAAC TTCTTGTTTTGGATTTGAGTAACAATGATTTTTCTGGTCCTATTCCCAGTAAAATTGCAGAGACAACAGAGAAACTTGGC CTTGTTCTTCTTGACCTTTCCCACAATCAATTCTCTGGTGAAATTCCTGTGAAAATTACTGAGTTGAAAAGTTTGCAGGC CTTGTTCCTTTCTCACAATCTTCTTTCAGGAGAAATTCCTGCTAGAATTGGAAACTTGACTTATCTTCAAGTTATTGATC TCTCACACAACTCTTTGTCTGGTACCATTCCATTCAGTATTGTTGGATGCTTTCAGCTGTATGCTTTAATACTTAATAAC AACAATCTTTCTGGTGTGATTCAACCTGAGTTTGATGCATTGGATATCTTGAGGATACTGGATATAAGCAACAACGGGTT TTCTGGTGCTATTCCACTCACTTTGGCTGGATGCAAATCTCTGGAGATTGTAGATTTTAGGTCCAATGATCTTTCTGGAT CCTTGAATGATGCAATAACCAAGTGGACAAACCTCAGGTATCTTTCTCTTGCTGAGAACAAGTTCAGTGGCGATTTGCCT AGTTGGTTGTTCACGTTCGAATCAATAGAAACAATGGATTTCTCTCACAACAAGTTTTCTGGCTTCATACCTGATATTAA TTTTAAGGGTAGCTTAATATTTAACACAAGGAATGTCACTGTTAAGGAGCCACTGGCTGCACCAAAAGAGTTTCAACTCA GAGTTTCAGCTGTTGTTTCTGATAGCAATCAACTTAGTTTCACTTATGATCTCTCATCAATGGTTGGAATCGATCTATCC AGCAACTTGCTACATGGGGAGATTCCAAGGGGCTTGTTTGGCCTAACTTCCCTAGAATACATGAATTTGTCTTACAATTT TCTAGATGGACAGCTTCCTGGTTTGCAGAAAATGCAGAGTTTGAAAGCCTTGGATTTGTCACATAATTCTCTGTCAGGAC ATATCCCAGGAAACATTTCTACCCTTCAAGGTCTTGCGGTCTTGAATCTATCTTACAACTGCTTTTCTGGATATGTTCCC CAGAAGCAGGGGTATGGAAGATTTCCTGGTGCATTTGCTGGGAATCCAGATTTATGCTTGGAATCTTCAAATGGAATATG TGATGGTGGAAGGACTCCATCCGCGCGAGGAACATCTTTTGGGGAAGATGGGATGGATGGACCAATATCTGTGGGGATTT TCTTTATCAGTGCCTTTGTTAGTTTTGATTTTGGAGTTGTTGTTCTCTTCTGTTCTGCTCGAGCAAGAAACTACATTCTC CATACTAAAGTTTGA
Protein sequence (LotjaGi1g1v0483900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFMENSMPHHRFYHLLTLLCLILLCVTPSNSIDIHPQDKASLLKFRAWLQYPNQSLPNWVGSNCSTWNGITCDNSTGRVI SINLTNMNLSSQIHPSFCNLSYLNKVVLSHNNFTCPLPVCFGNLLNLKAIDLSHNQFHGGIPDSFMRLKHLTELVLSGNP DLGGPLPSWIGNFSANLERLHLGFSSLSGVIPESLLYLKSLKYLDLEDNLLSGNLVDFHQPLVFLNLASNQLSGTLPCFA ASVQSLTVLNLSNNSIVGGLPACVASFQALTHLNLSGNHLKYRIYPRLVFSEKLLVLDLSNNDFSGPIPSKIAETTEKLG LVLLDLSHNQFSGEIPVKITELKSLQALFLSHNLLSGEIPARIGNLTYLQVIDLSHNSLSGTIPFSIVGCFQLYALILNN NNLSGVIQPEFDALDILRILDISNNGFSGAIPLTLAGCKSLEIVDFRSNDLSGSLNDAITKWTNLRYLSLAENKFSGDLP SWLFTFESIETMDFSHNKFSGFIPDINFKGSLIFNTRNVTVKEPLAAPKEFQLRVSAVVSDSNQLSFTYDLSSMVGIDLS SNLLHGEIPRGLFGLTSLEYMNLSYNFLDGQLPGLQKMQSLKALDLSHNSLSGHIPGNISTLQGLAVLNLSYNCFSGYVP QKQGYGRFPGAFAGNPDLCLESSNGICDGGRTPSARGTSFGEDGMDGPISVGIFFISAFVSFDFGVVVLFCSARARNYIL HTKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 14 | 14 | - | – | |
| Phobius | 1 | 31 | 31 | - | – | |
| SignalP_EUK | 1 | 31 | 31 | - | – | |
| TMHMM | 12 | 34 | 23 | - | – | |
| Phobius | 15 | 26 | 12 | - | – | |
| Phobius | 27 | 31 | 5 | - | – | |
| PANTHER | 32 | 440 | 409 | 2.5E-181 | – | |
| Phobius | 32 | 688 | 657 | - | – | |
| PANTHER | 32 | 440 | 409 | 2.5E-181 | – | |
| SUPERFAMILY | 35 | 310 | 276 | 4.08E-51 | – | |
| Gene3D | 35 | 319 | 285 | 8.3E-70 | ||
| Pfam | 36 | 73 | 38 | 2.3E-5 | ||
| Pfam | 102 | 160 | 59 | 1.3E-9 | ||
| SMART | 198 | 220 | 23 | 330.0 | ||
| Pfam | 225 | 280 | 56 | 1.0E-7 | ||
| SMART | 243 | 266 | 24 | 400.0 | ||
| SMART | 267 | 292 | 26 | 58.0 | ||
| SUPERFAMILY | 291 | 637 | 347 | 1.1E-54 | – | |
| Gene3D | 320 | 393 | 74 | 5.7E-21 | ||
| SMART | 342 | 366 | 25 | 22.0 | ||
| PRINTS | 369 | 382 | 14 | 6.4E-6 | – | |
| Gene3D | 394 | 515 | 122 | 7.6E-30 | ||
| PANTHER | 437 | 505 | 69 | 2.5E-181 | – | |
| PANTHER | 437 | 505 | 69 | 2.5E-181 | – | |
| PANTHER | 485 | 724 | 240 | 2.5E-181 | – | |
| PANTHER | 485 | 724 | 240 | 2.5E-181 | – | |
| Gene3D | 550 | 659 | 110 | 3.6E-30 | ||
| SMART | 551 | 575 | 25 | 49.0 | ||
| SMART | 598 | 622 | 25 | 24.0 | ||
| PRINTS | 598 | 611 | 14 | 6.4E-6 | – | |
| Pfam | 600 | 620 | 21 | 1.1 | ||
| Phobius | 689 | 711 | 23 | - | – | |
| TMHMM | 689 | 711 | 23 | - | – | |
| Phobius | 712 | 724 | 13 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0483900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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