Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0523300 |
| Transcript ID | LotjaGi1g1v0523300.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT5G16000.1 NSP-interacting kinase 1; Swiss-Prot: sp|Q9LFS4|NIK1_ARATH Protein NSP-INTERACTING KINASE 1; TrEMBL-Plants: tr|A0A0B2Q374|A0A0B2Q374_GLYSO Protein NSP-INTERACTING KINASE 1; Found in the gene: LotjaGi1g1v0523300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:104809659..104814531) extracted from Lotus japonicus Gifu genome v1.2.
CATAATGTTCTCCAATGAAATCTAATGATATCTCTCATGCTCAAAGTACTTTTTCTCTTCTTTTTTCTTTCTAATACTGT TGTCCTAATTCATATATATTAATAATTCATGAAATCTTCTTTCTGCTTTATGTGCATGTGTATGATTAACACACAAGTGA ATTTCCCATTCTCTCCCCTGCCCTTCACCTTCACTCACCATATTCATTTGTTCTTCTAAGGATTAAAGGCCATTCATTGT ATATTATATTTTGTTCACAGCTTCCTGACTCACTCAGTGGCAGGCATGCTAAGTTCCCTTTATACTGCAGAAGAACACAT CTTTTTTTTCCCCACTTGGTCTCTGACACAGGATTTTTTGGTGAATGAGATTCTAGCATGGAAAGAAGGAACTGTGTTTC TTTTCTAGTTTTGAATAGTGAACAAGGAAGAACAACATCATCCATTATTTGAAAACTGTTAAATAGTTTCAAACACCATC TTTACCTGTTTCTGGTTCTTGGAAACTCCAATCAATGAGGATGCCAAGAGGAGTTTCTGTTCTTTGTTTTGCAATTTTCT TGGTTTGGAGCTCTGCAAGTGCCTTGCTATCTCCTAAAGGAGTGAACTTTGAAGGTAAATTTTGTAACTTTCCACTTCAT ATCAGTTCAATATGCAGAGTTTTCAATTTGGTCTCTCTGAATGCAGTGCAAGCTTTAATGGGTATAAAGGAACTTCTACA TGATCCTCGTGGTGTTCTAGATAATTGGGATGGGGATGCAGTTGATCCATGTAGCTGGGCCATGGTAACATGTTCAAGTG ACAACCTGGTCATTAGCCTGTAAGATTTTTCTTCAATCTTCTATTTGAAGTTGCAATATTTGTTTGAACTTTGAACACTC AGCAAAAGCTAAATGAACTGGTCTTGCAATTTTGCAGGGGCACTCCCAGTCAAAATTTGTCTGGTACTCTATCTGCAACC ATAGGCAACTTAACCAATCTTCAGACTGTGTAAGTAACCAGAAATTTAGTTTAATATACCCAAGATGGAAGATTCTTATA TACTTACCTTTTCTCATAATCATTTCTGACACTCGGAATCAAATTCTGGCACTCTGAAGCTACTCACAGAAGCTTCTTCG CCAGAGAATTGATTTTGGCTTCAAAATCAATTACAGAAGAATTTCCAAACATGCACTAAGATGAGTGTTTTGACCACTTT CAGGTTGCTACAGAATAACAACATAAGTGGACCAATCCCTTCAGCGCTAGGAAAACTTCCCAAGCTTCAAACACTTGATC TCTCTAATAATTCCTTCAGTGGGGAAGTTCCTCCCTCACTGGGTCACCTGAGAAGCCTCCAATACCTGTAAGGATGTTAC ATTATACAAGTAGAAGCTATTTTCAGTGTGAATGTCTAAACTCTAAAGCTAAAGGTTTATTAAAATTGTTTTGTTTCAGG AGGCTCAATAATAACAGTCTTGTTGGTGAATGCCCAGAATCACTGGCTAACATGACTCAGCTTTCTTTTCTGTAATATAC ATGATCCTCTTCTTTTGTGTCTTATGCATTCTGTTCTTATTTTTTTGTGTTCCTAAAGATGTTTTCTTGTTTTGTGATTA ACAATTCAGAGATTTGTCCTACAACAATCTTAGTGGCCCAGTACCCAGAATTTTGGCCAAATCATTCAGGTAATACTCTC TCTGTCTCTCTTATGATTGTGCATTTCCTTCTAGGAGGTACTAAGTGAAAGACTAATTTCATTCCTTTCCTCTTGTTTCA GCATTCTTGGCAACCCCCTTGTTTGTGCTACTGGAAAAGAACCAAATTGCCATGGGATCACACTGATGCCCATGTCCATG AATTTAAACAATACTGAAGGTATGATCTTTTTAGTGCATGTTTGGAAATTCTAAAATCAGAACCAGTTCTGGAGAGAAGT TTCTGTAAATAGCTTCTAAATTTCAGAATTGATTATGAGAAAAGCCATTTAGTTTTTACTTTTTGAATTTGATTGTTCAT GCCTTGTGTTCCCTTCCAATGTACTGTACTATGATATATTCTGCATAGTCATTGTTTTAATTCTGACTGTAATATCTTTG CTTTCCTAGATGCTTTGCCATCAGGCAAACCGAAAACTCATAAGATGGCCATTGCCTTTGGCTTGAGTCTGGGATGCCTC TGCCTTATACTTCTTGGTTTTGGAGCTTTTCTTTGGTGGAGGCACAAGCATAACCAACAAGCATTCTTTGATGTTAAAGG TACTTTACATGCAATTTGGAACCTTTAAGTGGAGGTTAAATGTATATACAAGAATGTTAATGTGCAATACAGGTTAACAT TTTCAATTATAGTACATGTTTGGATATATGGTAGATTTTCACGTTGGAAGGAGAATTGATTCTGGGAGAAGCTACTCCTA GTAGCTTTTGTGGGAGAAGAATTGATTCTGCAATATTTAAACGTTAATTCAAACATGCTAGCTATATATTGATCTAATTT ATGACATTATTAAATGTTTCAGACCGGCATCATGAAGAAGTCTACCTTGGAAACTTGAAGAGGTTCCCATTCAGAGAACT CCAGATTGCTACTCACAACTTCAGCAACAAGAATATACTGGGAAAAGGTGGTTTTGGAAATGTGTACAAAGGAGTTCTCT CAGATGGAACTCTTGTAGCTGTCAAGAGGCTTAAAGATGGCAATGCCATTGGAGGAGAGATTCAGTTTCAGACTGAAGTT GAAATGATCAGCCTGGCAGTGCACAGAAACCTCCTCAAACTGTATGGATTTTGCATGACACCAACAGAAAGGCTTCTAGT TTACCCCTACATGTCTAATGGCAGTGTTGCTTTGCGTCTGAAGGGTAAGCTCAGTTGTAACCTTTCCAACTCAAATTCAG TGCATGTTTGGATACACAGTAAGGAAAAAGAATTGAGTCTGAGAGAAGCTACTCCTAGTAGCTTTTGTGATAAAACAATT GATTCTGGAAGATCTGAACGTGAACAGAAACATGCTATCAAAGTACCTAGTTTTGGGGTTGATTCTGATGCCAATTTGGT TTTGTTTTCAGGTAAGCCAGTCTTGGATTGGGGCACAAGGAAACATATTGCTTTAGGAGCTGCAAGGGGGCTACTCTACC TTCATGAGCAGTGTGATCCAAAGATAATCCACAGGGATGTCAAAGCTGCTAATATTTTGCTTGATGACTATTGTGAAGCT GTAGTTGGAGATTTTGGGCTAGCAAAGCTTTTGGATCACCAAGACTCTCATGTCACAACTGCAGTGAGGGGCACTGTGGG TCATATTGCCCCAGAGTATTTATCCACTGGTCAATCCTCTGAGAAGACCGATGTCTTTGGATTTGGCATTCTCCTTCTTG AGTTAATCACAGGCCAAAGAGCTCTGGAATTTGGAAAAGCAGCTAACCAGAAAGGAGCCATGCTTGATTGGGTAAGCTTG TTTCCCTTTATTCATTAGAATTCCTTTCCAGTTAGAAATATAATATATCATTCACGTGTTCTTTACCAACAACTTAAGCT TTTGAGATAGTCGGTCCATCATATGGTATCGGAGCCTCTTAGGGGGGGTGTCAAAACAGGTTAACACGCCACCAACCTTC CTATAAGGGGGTGGAACGGATTGAGCCGCCACCAAAATATGCGTTTAATATTACAACACGCCTTGTTCTGAAGTGGTTTG GCAGGTTGGGCCATCAAAAAAAGTCTGAGTTGTGAGCTAATCTCACAAGCTCTCACTTATTATAATAAAAAGTTGAATTT TAGCACAATGTAGGTGAACTTGTTCATTATTCATGCTTCAAGCCTAATGTGCTCTTACGTGAGAGGGCGCGTTAGAATAT AATATTAAGTCATTCATGCTTCATTTACTCAACGGCTTAAGCTTTGGATTATAACAGCCCTTATCTCAAATCAAATAGTT AGACCTTTTACTGTTGACATTCAGGTAAAGAAAATTCATCTAGAAAAGAAGCTTGAGTTGCTGGTAGACAAGGATCTCAA GAGCAACTATGACCAGATTGAGCTTGAGGAAATGGTTCAAGTGGCTCTCTTGTGCACTCAATACCTCCCAGGCCACAGGC CAAAAATGTCTGAAGTGGTTCGCATGCTCGAAGGTGATGGTTTAGCGGAGAGATGGGAAGCTTCTCAGAGAGCTGACACT AGCAAGTGCAGACCCCATGAGTCCTCTTCATCAGATAGGTACTCTGATCTCACTGATGACTCGCTTTTGTTAGTCCAAGC CATGGAGCTCTCGGGACCCAGATGAACTGTCTAGTCATTTTTTTGGTTTTGTTTCAAAGTTTTCTAAAGAAAGCACATGA AATTGAAGAGCATATGATAGTTGAGTCTATTTCCAAACCCCTTTAAGATTATAGGGTGTGTTTGGATTTGAATTGACATC AACTTGAAAGCACGTTCATGCCAACGGAAGCAAAGGGTTCATTTTACATTTGCTCTACTGGAATTTTTAGTCGAAGTTGT CTGTGAATTGTAAACCAAACACACACTATATGTTGTATGATAGAGGTGTCTCAAGGATGAAAATGGTTTTTGATGATGTT TACTACCAAATGTACAGAATCTGATTCGTTGAGTGTTAGTTTGTAGTGCAAATTTTTGTAATCTTAAATCAATGTGGCCT AGCCTGTATTGGTTTTGCAGTGTAACATCCTGTGCTTATATGAACAATGATCACAACTTCTCTTTGTTTTCCTCCTAAAG CTCCACAAAAAATTGTGAATGTTATTTCACTTATGACTTATCTGAATTTATTTTACACCATTTTGTCTTATGATCTACTA CTACTTTCCAATTTGTGAACCCTTGTACAAACTAGTGTGTCCCTGCATAAAGCAACAAGTTTTTCTCTCTTAA
CDS sequence (LotjaGi1g1v0523300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGATGCCAAGAGGAGTTTCTGTTCTTTGTTTTGCAATTTTCTTGGTTTGGAGCTCTGCAAGTGCCTTGCTATCTCC TAAAGGAGTGAACTTTGAAGTGCAAGCTTTAATGGGTATAAAGGAACTTCTACATGATCCTCGTGGTGTTCTAGATAATT GGGATGGGGATGCAGTTGATCCATGTAGCTGGGCCATGGTAACATGTTCAAGTGACAACCTGGTCATTAGCCTGGGCACT CCCAGTCAAAATTTGTCTGGTACTCTATCTGCAACCATAGGCAACTTAACCAATCTTCAGACTGTGTTGCTACAGAATAA CAACATAAGTGGACCAATCCCTTCAGCGCTAGGAAAACTTCCCAAGCTTCAAACACTTGATCTCTCTAATAATTCCTTCA GTGGGGAAGTTCCTCCCTCACTGGGTCACCTGAGAAGCCTCCAATACCTGAGGCTCAATAATAACAGTCTTGTTGGTGAA TGCCCAGAATCACTGGCTAACATGACTCAGCTTTCTTTTCTAGATTTGTCCTACAACAATCTTAGTGGCCCAGTACCCAG AATTTTGGCCAAATCATTCAGCATTCTTGGCAACCCCCTTGTTTGTGCTACTGGAAAAGAACCAAATTGCCATGGGATCA CACTGATGCCCATGTCCATGAATTTAAACAATACTGAAGATGCTTTGCCATCAGGCAAACCGAAAACTCATAAGATGGCC ATTGCCTTTGGCTTGAGTCTGGGATGCCTCTGCCTTATACTTCTTGGTTTTGGAGCTTTTCTTTGGTGGAGGCACAAGCA TAACCAACAAGCATTCTTTGATGTTAAAGACCGGCATCATGAAGAAGTCTACCTTGGAAACTTGAAGAGGTTCCCATTCA GAGAACTCCAGATTGCTACTCACAACTTCAGCAACAAGAATATACTGGGAAAAGGTGGTTTTGGAAATGTGTACAAAGGA GTTCTCTCAGATGGAACTCTTGTAGCTGTCAAGAGGCTTAAAGATGGCAATGCCATTGGAGGAGAGATTCAGTTTCAGAC TGAAGTTGAAATGATCAGCCTGGCAGTGCACAGAAACCTCCTCAAACTGTATGGATTTTGCATGACACCAACAGAAAGGC TTCTAGTTTACCCCTACATGTCTAATGGCAGTGTTGCTTTGCGTCTGAAGGGTAAGCCAGTCTTGGATTGGGGCACAAGG AAACATATTGCTTTAGGAGCTGCAAGGGGGCTACTCTACCTTCATGAGCAGTGTGATCCAAAGATAATCCACAGGGATGT CAAAGCTGCTAATATTTTGCTTGATGACTATTGTGAAGCTGTAGTTGGAGATTTTGGGCTAGCAAAGCTTTTGGATCACC AAGACTCTCATGTCACAACTGCAGTGAGGGGCACTGTGGGTCATATTGCCCCAGAGTATTTATCCACTGGTCAATCCTCT GAGAAGACCGATGTCTTTGGATTTGGCATTCTCCTTCTTGAGTTAATCACAGGCCAAAGAGCTCTGGAATTTGGAAAAGC AGCTAACCAGAAAGGAGCCATGCTTGATTGGGTAAAGAAAATTCATCTAGAAAAGAAGCTTGAGTTGCTGGTAGACAAGG ATCTCAAGAGCAACTATGACCAGATTGAGCTTGAGGAAATGGTTCAAGTGGCTCTCTTGTGCACTCAATACCTCCCAGGC CACAGGCCAAAAATGTCTGAAGTGGTTCGCATGCTCGAAGGTGATGGTTTAGCGGAGAGATGGGAAGCTTCTCAGAGAGC TGACACTAGCAAGTGCAGACCCCATGAGTCCTCTTCATCAGATAGGTACTCTGATCTCACTGATGACTCGCTTTTGTTAG TCCAAGCCATGGAGCTCTCGGGACCCAGATGA
Protein sequence (LotjaGi1g1v0523300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRMPRGVSVLCFAIFLVWSSASALLSPKGVNFEVQALMGIKELLHDPRGVLDNWDGDAVDPCSWAMVTCSSDNLVISLGT PSQNLSGTLSATIGNLTNLQTVLLQNNNISGPIPSALGKLPKLQTLDLSNNSFSGEVPPSLGHLRSLQYLRLNNNSLVGE CPESLANMTQLSFLDLSYNNLSGPVPRILAKSFSILGNPLVCATGKEPNCHGITLMPMSMNLNNTEDALPSGKPKTHKMA IAFGLSLGCLCLILLGFGAFLWWRHKHNQQAFFDVKDRHHEEVYLGNLKRFPFRELQIATHNFSNKNILGKGGFGNVYKG VLSDGTLVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLKLYGFCMTPTERLLVYPYMSNGSVALRLKGKPVLDWGTR KHIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSS EKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVKKIHLEKKLELLVDKDLKSNYDQIELEEMVQVALLCTQYLPG HRPKMSEVVRMLEGDGLAERWEASQRADTSKCRPHESSSSDRYSDLTDDSLLLVQAMELSGPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 7 | 18 | 12 | - | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Phobius | 24 | 238 | 215 | - | – | |
| Gene3D | 27 | 212 | 186 | 2.5E-56 | ||
| SUPERFAMILY | 33 | 195 | 163 | 1.19E-38 | – | |
| Pfam | 33 | 70 | 38 | 4.2E-10 | ||
| PANTHER | 67 | 141 | 75 | 7.2E-225 | – | |
| PANTHER | 67 | 141 | 75 | 7.2E-225 | – | |
| SMART | 96 | 119 | 24 | 170.0 | ||
| Pfam | 97 | 157 | 61 | 1.6E-9 | ||
| SMART | 120 | 143 | 24 | 24.0 | ||
| PANTHER | 122 | 599 | 478 | 7.2E-225 | – | |
| PANTHER | 122 | 599 | 478 | 7.2E-225 | – | |
| PRINTS | 123 | 136 | 14 | 6.8E-5 | – | |
| SMART | 144 | 167 | 24 | 41.0 | ||
| SMART | 168 | 191 | 24 | 56.0 | ||
| PRINTS | 168 | 181 | 14 | 6.8E-5 | – | |
| Phobius | 239 | 263 | 25 | - | – | |
| TMHMM | 241 | 263 | 23 | - | – | |
| Phobius | 264 | 623 | 360 | - | – | |
| Gene3D | 272 | 379 | 108 | 9.9E-37 | – | |
| SUPERFAMILY | 280 | 573 | 294 | 1.35E-75 | ||
| ProSiteProfiles | 303 | 582 | 280 | 34.859 | ||
| SMART | 303 | 572 | 270 | 6.0E-35 | ||
| Pfam | 304 | 570 | 267 | 8.4E-44 | ||
| ProSitePatterns | 309 | 331 | 23 | - | ||
| Gene3D | 380 | 592 | 213 | 1.4E-58 | – | |
| ProSitePatterns | 422 | 434 | 13 | - | ||
| MobiDBLite | 583 | 603 | 21 | - | – | |
| MobiDBLite | 583 | 606 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0523300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…