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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0002200 |
| Transcript ID | LotjaGi2g1v0002200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G66150.1 transmembrane kinase 1; Swiss-Prot: sp|P43298|TMK1_ARATH Receptor protein kinase TMK1; TrEMBL-Plants: tr|A0A0S3T1X2|A0A0S3T1X2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0002200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:1175282..1179573) extracted from Lotus japonicus Gifu genome v1.2.
AACCGCCACAAATTGACTTCGTGCATTACACGAGAAATCTGTCTCGTGCACTATGACATTTTCCTTAAAAAATGAGATGT GTATACCATTGTTGATTTATGAAACACTGAAACGTCTTTCCATGCATTCATTCCATTTCCAACCCAATTTCAATTTTTTT ATTTCCAACCCAAAAATGCGTAGTCTCACACAATGAATGTCAAACTTTTTTCTCCTTTCTCATAGTGTTTCTTCAGTTTC TTTTCTTCTCGCTCTCGTTTCTCACTCTCTCTCACACATTCTGATTCTTTCCAAAATAAAGAAAGCAATAACTTTTTTTC CTTTTCTCACATTATTCTCTCCCAAAATTCCCTTTTTCGGAATAATCTCTATCATTCACAGTGCCGTGTGGTTTTTGATA TTTGAATGATCATTGTTTGCGTTTCAAAACCTTTGCACATTGCAGATATTCATATTCCTCTGTTTTGCATTCTCTGTTTT CGTAACGCCACCTTGTTCCTTCCTCTGTTTCCTTTCTCCAACAAAAAAAAATGGGTTTTCGGTTTTCTCTGGTTCATCTT CTTCACCTTGTTCTGTTGTTGTTTTCTTTGATGTTTCTGCCTCGTGCATGTCCTCAAGATGCTGTTGTGATGAACACGCT CAAGAAGGCGATAACTTCAAGCTCTGGTCTAAAATGGTCAGACCCTGATGTCTGTAACTGGAATCATGTTCAGTGCAATT CGAACAAGAGGGTCACTGCAATTCAAATCGGGTATCTCAACCTTGAAGGGTCTTTGCCGAAGGAACTGGTTCAGCTCACT GAGTTAACTCGCTTTGAGTGTATGCAAAATGGCTTCACTGGGCCGTTTCCTTACATGCCCAAATCTTTGGAGATTCTGAT CATTCATGACAACAATTTCAGTTCCATTCCATTTGATTTCTTCAGCAACATGACCAATTTGCAGGAGGTGAGGATTGACT ACAACGATTTTCCTCAATGGCAGGTTCCTTCTAGCCTCAAAGATTGTGTTGCTCTTCAGCAATTTTCTGCAATGAGAGCT GGTTTTGTTGGGGGAATCCCAGAATTCTTTGGGAAAGATGGTCCTTTTCCAGGTTTGGTTTTCTTGGGGTTGTGTTTTAA TTCTTTTGAAGGTGGGTTGCCTGCAAGCTTTTCTGGGAGTTCTATAGAGAATCTTTTGGTGAATGGTCAGATGGGTAACT CTAAGCTCAATGGATCACTTTCTGTGTTGCAGAACATGACTTCGTTGAAACAAATTTGGGTGCATGGTAATTCATTTACA GGTCCTATACCAGATTTGTCAAACCATGATCAACTTTTTGATGTGAGCTTGAGGGATAACCAGTTAACTGGTGTTGTTCC ACCCTCTCTCACTGATCTTCCTGCTTTGAAGGTTGTGAATTTGACCAATAATTATCTTCAAGGGTCTCCTCCCAAGTTCA AAGATGGGGTTAGGGTTGATAATGATATGGATAGGGGGAACAATAGATTTTGCACAAAGGTTGTTGGTCAGCCATGTAGT CCCCTTGTGAATGTTTTGCTTTCTGTTGTTGAACCTTTGGGGTATCCTTTAAAACTTGCTGAAAATTGGGAGGGTAATGA CCCTTGTGGTAAACAATGGATGGGGATTGTCTGTGCTGGGGGTAATATTTCCATTATCAATTTTCAGAACATGGGTCTAT CTGGCAACATTTCTCCTGGTTTTGCCCAACTTACATCTGTGACAAAGTTGTTTCTTGCTAACAATGATCTCACAGGTACT ATACCAAGTGAACTTACTAGTATGCCTCTTCTGAAACAGCTAGATGTTTCCAACAATAAGTTATATGGTCAGGTACCATC CTTCCGAGCAGATGTGGTTTTGAAGACTGGTGGGAATCCTGATATTGGAAAGGACAAACCTCAAGGGCCGCCTGGCTCTG GAGGTAAAGATAAGAAACATGGTGCTGGAGCTATTGTTGGGATTGCTGTAGGGGGTGTCAGCTTGCTTGGTATAGGGGTT CTGGGAGTTGTTATTTATGGTAGAAAGCATAAAAAGCGTCCTGCTGGAAAACTTCAAAGTCCAAATGCAATTGTGGTACA TCCTCGTCATTCTGGAGACGGAAATGGTTTGAAGATAAGTGTTGCCGCAGCGAGTGGTAGTGGTGGGGGAACTAGTACTG GTGGATTTAGTCCAGCTACTAGTGTTCAAACTGTGGAAGCTGGTAACATGGTCATTTCAATTCAAGTTTTGAGAGAAGTC ACAAACAATTTCAGTGAAGAAAACATATTGGGGAGGGGCGGGTTTGGCACGGTGTACAAAGGAGAATTGCATGATGGAAC AAAGATTGCAGTGAAAAGGATGGAATGTGGAATGGTGGTTGAGAAAGGGCTGGATGAGTTCAAGTCTGAAATCGCAGTAC TCACTAAAGTTCGACACAGGCATTTGGTTGCACTCCTAGGCTATTGCTTAGATGGAAATGAGAGGCTTCTGGTGTATGAA TACATGCCTCAGGGGCCTCTTAGTAAACACCTATTTGACTGGCAAGAAGAAGGGTTAAGACCACTGGAGTGGAAGAGAAG GCTTTCCATTGCCTTGGATGTTGCTAGAGGTGTTGAATATCTTCATGCTTTGGCACAACAAATTTTTATCCATAGGGATC TGAAACCTTCAAATATCTTGCTTGGGGATGATATGCGTGCTAAAGTAGCAGACTTTGGATTGGTTCGGCTTGCACCAGAT GGACAAGTCTCATTCGCAACTAGAATTGCTGGAACTTTTGGATATCTTGCACCAGAGTATGCAGGTAGACATAAATTACT TTTAGCTAACTTTGTGCAGCATATGGTTATTTTTAATTTTTTTTTGGTAAAATTAGTCTTTGCTATGCTTTCAGTTTATT TGAAATCTTATGCACTTATGGTAGATGATCTAAGTGGTTCATGTGTAGTATGCATAGGGGAAAATAGAAAAATGAAGGAA TAAATCCTCCTGCCAACCATTGTCACTTACTTTGGTGTTGATTGTTAAAACACCTTCTAGATATTGTGAATACTGTTATG CAAAGTGACCGTAAAACTCTTAACTAGTATGCTCCTTTTTATAAAATTTTGTCTGGAAATACAACTTTATGGACACCTCC TAAGAGCCATTTGAATTATTTGTATGATTTTCTACCTCTATCCAATTTGCATACCTTGTTCTACTTTGGGTGTTGATATT TATTTGAGTTCATCAGAAAGAAAATTTGGTGCTAGCTAGCTTTGCTCATATAAATGAGTGAATATGATTATTTACTGTTT GTATCACACATTATTTGTAATTCTATGTGTTTGTTGTTGCATAATATGTAAAAAAACAAAAAAAAGTAACTTGACTTTGA TTACCATATGATTTTTTTCTCTAATTATTATCAGGACAAATAGTTATGACATTCTAGAATACTGGTCATTTTTTCTCTTG TTCAATTCCGTAACTCATTGAGATGGTTTCATGGCGCAGTCACTGGACGAGTTACAACAAAGGTTGATGTATATAGCTAC GGCGTGATTCTTATGGAGATGGTAACCGGAAAGAGAGCAATTGACAATAGCCAACCAGAAGAGAGTATCCACCTTGTTAC ATGGTTCCGAAGGATGCTGCTGAACAAAGACTCATTCAGAAAGCTCATTGACCCCACAATAGATGTTGACGAGGAAGCCT TAGATAGTTTGAAGACTGTTGCAGACTTGGCCAGCCACTGCTGCGCAAGAGAGCCGCATCAGCGTCCTGACATGGGTCAT GTTGTGAATGTGATAGCACCGTTTGTTGAGATCTGGAAGAAGCCTGCAGTTGTAGATGCTGATGACATGTGTGGGATTGA CTTAGACATGAGCTTGCCTCGAGCACTCAGTAAGTGGCAGGCTCTTGATGGAATGAGCACTCTGGATCAATCATCTTCTA CATCAATGCTTAGTAGTGGAGATAATACACAGTCAAGCATTGCAACAATGCGACCTTCTGGATTTGCAGATTCGATTTGT GATGGAAGATGAAGTTTGATATATACATTTAGAACCTCTTTGATTTACTATTAAAAAGTAAAAACAAGAAAATAACATAT TCCAATGGTACTTCAACTATAAGTGTATCGGGATGTGTTATTTTTCTATTTTCTTTCTAACAGTAAACCAATCAGATTTT GAAGTTCTGATATCTATGTTATTACTTTTTCCTGACTCTTTGAGCTATTATTTCTGTAGTTTGTTTTACCATCTAGTTGG GAATTTACTGGTTTTTTTTTCTGTTTTTACATTTCATTCCTGAAACTTCTCT
CDS sequence (LotjaGi2g1v0002200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTTTCGGTTTTCTCTGGTTCATCTTCTTCACCTTGTTCTGTTGTTGTTTTCTTTGATGTTTCTGCCTCGTGCATG TCCTCAAGATGCTGTTGTGATGAACACGCTCAAGAAGGCGATAACTTCAAGCTCTGGTCTAAAATGGTCAGACCCTGATG TCTGTAACTGGAATCATGTTCAGTGCAATTCGAACAAGAGGGTCACTGCAATTCAAATCGGGTATCTCAACCTTGAAGGG TCTTTGCCGAAGGAACTGGTTCAGCTCACTGAGTTAACTCGCTTTGAGTGTATGCAAAATGGCTTCACTGGGCCGTTTCC TTACATGCCCAAATCTTTGGAGATTCTGATCATTCATGACAACAATTTCAGTTCCATTCCATTTGATTTCTTCAGCAACA TGACCAATTTGCAGGAGGTGAGGATTGACTACAACGATTTTCCTCAATGGCAGGTTCCTTCTAGCCTCAAAGATTGTGTT GCTCTTCAGCAATTTTCTGCAATGAGAGCTGGTTTTGTTGGGGGAATCCCAGAATTCTTTGGGAAAGATGGTCCTTTTCC AGGTTTGGTTTTCTTGGGGTTGTGTTTTAATTCTTTTGAAGGTGGGTTGCCTGCAAGCTTTTCTGGGAGTTCTATAGAGA ATCTTTTGGTGAATGGTCAGATGGGTAACTCTAAGCTCAATGGATCACTTTCTGTGTTGCAGAACATGACTTCGTTGAAA CAAATTTGGGTGCATGGTAATTCATTTACAGGTCCTATACCAGATTTGTCAAACCATGATCAACTTTTTGATGTGAGCTT GAGGGATAACCAGTTAACTGGTGTTGTTCCACCCTCTCTCACTGATCTTCCTGCTTTGAAGGTTGTGAATTTGACCAATA ATTATCTTCAAGGGTCTCCTCCCAAGTTCAAAGATGGGGTTAGGGTTGATAATGATATGGATAGGGGGAACAATAGATTT TGCACAAAGGTTGTTGGTCAGCCATGTAGTCCCCTTGTGAATGTTTTGCTTTCTGTTGTTGAACCTTTGGGGTATCCTTT AAAACTTGCTGAAAATTGGGAGGGTAATGACCCTTGTGGTAAACAATGGATGGGGATTGTCTGTGCTGGGGGTAATATTT CCATTATCAATTTTCAGAACATGGGTCTATCTGGCAACATTTCTCCTGGTTTTGCCCAACTTACATCTGTGACAAAGTTG TTTCTTGCTAACAATGATCTCACAGGTACTATACCAAGTGAACTTACTAGTATGCCTCTTCTGAAACAGCTAGATGTTTC CAACAATAAGTTATATGGTCAGGTACCATCCTTCCGAGCAGATGTGGTTTTGAAGACTGGTGGGAATCCTGATATTGGAA AGGACAAACCTCAAGGGCCGCCTGGCTCTGGAGGTAAAGATAAGAAACATGGTGCTGGAGCTATTGTTGGGATTGCTGTA GGGGGTGTCAGCTTGCTTGGTATAGGGGTTCTGGGAGTTGTTATTTATGGTAGAAAGCATAAAAAGCGTCCTGCTGGAAA ACTTCAAAGTCCAAATGCAATTGTGGTACATCCTCGTCATTCTGGAGACGGAAATGGTTTGAAGATAAGTGTTGCCGCAG CGAGTGGTAGTGGTGGGGGAACTAGTACTGGTGGATTTAGTCCAGCTACTAGTGTTCAAACTGTGGAAGCTGGTAACATG GTCATTTCAATTCAAGTTTTGAGAGAAGTCACAAACAATTTCAGTGAAGAAAACATATTGGGGAGGGGCGGGTTTGGCAC GGTGTACAAAGGAGAATTGCATGATGGAACAAAGATTGCAGTGAAAAGGATGGAATGTGGAATGGTGGTTGAGAAAGGGC TGGATGAGTTCAAGTCTGAAATCGCAGTACTCACTAAAGTTCGACACAGGCATTTGGTTGCACTCCTAGGCTATTGCTTA GATGGAAATGAGAGGCTTCTGGTGTATGAATACATGCCTCAGGGGCCTCTTAGTAAACACCTATTTGACTGGCAAGAAGA AGGGTTAAGACCACTGGAGTGGAAGAGAAGGCTTTCCATTGCCTTGGATGTTGCTAGAGGTGTTGAATATCTTCATGCTT TGGCACAACAAATTTTTATCCATAGGGATCTGAAACCTTCAAATATCTTGCTTGGGGATGATATGCGTGCTAAAGTAGCA GACTTTGGATTGGTTCGGCTTGCACCAGATGGACAAGTCTCATTCGCAACTAGAATTGCTGGAACTTTTGGATATCTTGC ACCAGAGTATGCAGTCACTGGACGAGTTACAACAAAGGTTGATGTATATAGCTACGGCGTGATTCTTATGGAGATGGTAA CCGGAAAGAGAGCAATTGACAATAGCCAACCAGAAGAGAGTATCCACCTTGTTACATGGTTCCGAAGGATGCTGCTGAAC AAAGACTCATTCAGAAAGCTCATTGACCCCACAATAGATGTTGACGAGGAAGCCTTAGATAGTTTGAAGACTGTTGCAGA CTTGGCCAGCCACTGCTGCGCAAGAGAGCCGCATCAGCGTCCTGACATGGGTCATGTTGTGAATGTGATAGCACCGTTTG TTGAGATCTGGAAGAAGCCTGCAGTTGTAGATGCTGATGACATGTGTGGGATTGACTTAGACATGAGCTTGCCTCGAGCA CTCAGTAAGTGGCAGGCTCTTGATGGAATGAGCACTCTGGATCAATCATCTTCTACATCAATGCTTAGTAGTGGAGATAA TACACAGTCAAGCATTGCAACAATGCGACCTTCTGGATTTGCAGATTCGATTTGTGATGGAAGATGA
Protein sequence (LotjaGi2g1v0002200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFRFSLVHLLHLVLLLFSLMFLPRACPQDAVVMNTLKKAITSSSGLKWSDPDVCNWNHVQCNSNKRVTAIQIGYLNLEG SLPKELVQLTELTRFECMQNGFTGPFPYMPKSLEILIIHDNNFSSIPFDFFSNMTNLQEVRIDYNDFPQWQVPSSLKDCV ALQQFSAMRAGFVGGIPEFFGKDGPFPGLVFLGLCFNSFEGGLPASFSGSSIENLLVNGQMGNSKLNGSLSVLQNMTSLK QIWVHGNSFTGPIPDLSNHDQLFDVSLRDNQLTGVVPPSLTDLPALKVVNLTNNYLQGSPPKFKDGVRVDNDMDRGNNRF CTKVVGQPCSPLVNVLLSVVEPLGYPLKLAENWEGNDPCGKQWMGIVCAGGNISIINFQNMGLSGNISPGFAQLTSVTKL FLANNDLTGTIPSELTSMPLLKQLDVSNNKLYGQVPSFRADVVLKTGGNPDIGKDKPQGPPGSGGKDKKHGAGAIVGIAV GGVSLLGIGVLGVVIYGRKHKKRPAGKLQSPNAIVVHPRHSGDGNGLKISVAAASGSGGGTSTGGFSPATSVQTVEAGNM VISIQVLREVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMECGMVVEKGLDEFKSEIAVLTKVRHRHLVALLGYCL DGNERLLVYEYMPQGPLSKHLFDWQEEGLRPLEWKRRLSIALDVARGVEYLHALAQQIFIHRDLKPSNILLGDDMRAKVA DFGLVRLAPDGQVSFATRIAGTFGYLAPEYAVTGRVTTKVDVYSYGVILMEMVTGKRAIDNSQPEESIHLVTWFRRMLLN KDSFRKLIDPTIDVDEEALDSLKTVADLASHCCAREPHQRPDMGHVVNVIAPFVEIWKKPAVVDADDMCGIDLDMSLPRA LSKWQALDGMSTLDQSSSTSMLSSGDNTQSSIATMRPSGFADSICDGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | - | – | |
| SignalP_EUK | 1 | 28 | 28 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 28 | 28 | - | – | |
| Phobius | 5 | 23 | 19 | - | – | |
| TMHMM | 5 | 24 | 20 | - | – | |
| Phobius | 24 | 28 | 5 | - | – | |
| PANTHER | 28 | 895 | 868 | 5.4E-254 | – | |
| Gene3D | 28 | 327 | 300 | 1.1E-65 | ||
| PANTHER | 28 | 895 | 868 | 5.4E-254 | – | |
| Phobius | 29 | 473 | 445 | - | – | |
| Pfam | 29 | 63 | 35 | 0.0038 | ||
| SUPERFAMILY | 39 | 438 | 400 | 3.06E-38 | – | |
| Gene3D | 331 | 456 | 126 | 6.4E-28 | ||
| Pfam | 345 | 368 | 24 | 1.4 | ||
| MobiDBLite | 446 | 469 | 24 | - | – | |
| Phobius | 474 | 497 | 24 | - | – | |
| TMHMM | 475 | 497 | 23 | - | – | |
| Phobius | 498 | 928 | 431 | - | – | |
| Gene3D | 543 | 651 | 109 | 2.9E-35 | – | |
| SUPERFAMILY | 555 | 857 | 303 | 3.64E-81 | ||
| SMART | 574 | 854 | 281 | 6.5E-49 | ||
| ProSiteProfiles | 574 | 854 | 281 | 40.965 | ||
| Pfam | 575 | 848 | 274 | 2.5E-48 | ||
| ProSitePatterns | 580 | 602 | 23 | - | ||
| CDD | 580 | 847 | 268 | 3.60256E-97 | – | |
| Gene3D | 652 | 861 | 210 | 9.8E-58 | – | |
| ProSitePatterns | 699 | 711 | 13 | - | ||
| MobiDBLite | 895 | 928 | 34 | - | – | |
| MobiDBLite | 895 | 917 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0002200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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