Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0024500 |
| Transcript ID | LotjaGi2g1v0024500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Embryo defective 2765; TAIR: AT2G38770.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|O60306|AQR_HUMAN Intron-binding protein aquarius; TrEMBL-Plants: tr|I1NCV6|I1NCV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0024500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:8498449..8508219) extracted from Lotus japonicus Gifu genome v1.2.
ATGACGAAAGTGCACGGCACGGGAACATACGATTTCCGCCGCCATAGAGTGGCGGAGTATCCGGTGGCAGCGGAGCCGAA ACCAGTAGAGTGGAGTCAAAAGAGTGGCGGTGCTCTTCCCAGCACACTCACAGTATCTGAGATTCAACGTGACAGGTTGA CCAAGATTGCAGAGGAGAATTGGTCGAAGAAGAAGAAGGAGAAAGCGTTTGATGCGGAGGTTGTTGAGAAAATCTACGAA AGTGAGTTGTTGGTGAAAGAGGGTCAGGGTCACAAACCCGTTCCTTTGCAGAGGGTCATGATCCTTGAGGTTAGTCAGTA TCTCGAGAATTACCTCTGGCCCCATTTCGACCCTCTCACTGCTACCTTCCAGCATGTTATGTCCATCATCCTTATGGTCA ACGAGAAGGTCTTTCTCTACTCTTCTCTTCTCTTGTACTACTACTATTTTCAAACATACATTACATTTCATTCATGGAAC TTATTTCTGCCTTGCAGTTCCGCGAAAATGTCGCCGCTTGGGTTTGCTTCCATGAGAGGAAAGATGCCTTCAAAGGGTTT CTTGAGAGGGTTCTTCGCGTAAAGGAGGTCTCTATTATCTCTCTCATTTGCTGCATTATTTCTTTAATTAGTAATGGGAA GTTGCCGAAGTTTGTGATTGGATAGGATCTCTAGGGAGGATCACATGATTTCTTTCGTTACCCATTACTAGGTTTTGAGA TGTTGTTCAGTGTCGATTTGTCATTTCCTTGTTGAGTTGGACTTTTAATTGTGCATATTTGAACTGGGAGTCTGGCATTT GATGGTATATATTGTGACACTGCACTAAATCTCTATGTTCAAATCTTACTGTAGGGAAGAGAACTAAGTATAGCAGAGAA GACAAATTACCTAATTTTCATGATAAATGCCTTCCAGGTAAGCTGGCACTGCACTTTGTCCTTTACTTAAGTTACTTCAT TCGTACATGTTTAATTAGTTGGTCTACAACTACAAGTTTATTTTACATAGTTTGTATGTTTTCAGCAAAGTTTCCATAAT TTGTTTTTGAGGAAAATAGGGATGGTGTGTTGTTTTCATGTTTTACTTTAGGTGAAAATTGTATCTCATGAAAGAAGCTT ACTGTCTTTGTTTCAAGCCGTCGATGTTAGCATTTCTTGGTCAATGGAAAAAACTAAAAGGAAGAAAAATAATTTGTAAA TTCTACAGTCACTAGTTCCTACCTCTGAACATTTACTGTACCAAGGAAGTGCATTTGGAATTTGGCTTCTTGTCAATGAT TGTCAGTTGGTCCTGCTTAAAAAATTTCATACGACCAGTCCGTCGCAGGAATGATTTGTAATTATCATTCCATCATTGAA TATACCCGTCAAGACTTTTGGAGTTGTCATTTTATTTTATTCCATTTCCTTACCCATTCTCATTATAATAATTCCAGTGA ACAAATTTCTCCCTTAGATCATTGTTAATTGTAGCTGAGCAAATAACTTTGCATTGCAGAGTTTGGAAGATGAGGTTGTT AGCGAGACAGTCTTGAAACTAGCAAGTTTGAAATCCTGGTATAGTTTGTCTTATGGTCGTTTTCAGGTAAGATCAATTTT TCTTCAAGATGAAAATTGCCTTCATTTCTCTTTTTATTTATGATATTTTTTTCATTAATATTAAACATTATTATTTCCAT GCTAAATGTAATTTGGGCCATTGGTCTCCGCCTTGTAGATGGAGCTTTGTCTTAATCCAAGTTTGATCAAGAAATGGAAA AGGATGATAAAAAAGGAATCAGGGAAAGGAGGACACCATTCTGATCAGTCAACTGCGGTTGAAGTTATGTTCTTGAGGAA CCTCATAGAAGAATTTCTGGAGGTTGCAATCTCTTAAGCACTTTGAGTCTATGCACAACAACCTGTAACGGTTTTCAGTA AAACAAAATATATTTTCTTGCAAGTATGGGATAGATTTCCTTATGTTGTCTTTCTTTATCTTTTTAGATATTGGATTCAC AAGTGTTTCCCCAGAGGCAGTTGTCTGGTGAGAATGATGAACTTATTGATGGTGCTGATTTTGGTGTAGTTAATGATGCT TGTGTCCTTTATTGTGAGAGGTTTATGGAATTTCTTATTGACCTATTGAGTCAATTGCCAACGAGAAGGTATGTTGATAT GATTATTTTCTGTCTCTTTCATTTAAGGGTTGAATAGGTCAATTTGATTTTATATATTTCCAACTTTGCATAGATTTTGT ATTTTACAAGTGATATGAATGGTTGATTAAATTAATTCCATAATTTGAATTAGCAATTTTCTGGTTCTTTCATGCCAACT ATGGTTGAACTGAATATCAATTCGATCCTTAATGACATTAAGGTAGAAAGGATACTTTCAGAGACAACCTTGATTTTCTC ATGTAATCTTACCACAAAAAAATGTATTTTGTTTTCCTAACATATCTACTTTCTCAACTTTTCTTGTATGTTGCAGGTAT TTGAGGCCTCTAGTGGCTGATGTAGCTGTAGTTGCCAAATGCCACCTGAGTGCGCTCTATAGGCATGAAAAGGGAAAACT TTTTGCCCAATTGGTTGATTTATTACAATTCTATGAAGGGTTTGAGATTAACGATCATACTGGCACACAGTTAACAGATC ATGAGGTTCTCGAATCTCATTACAGCCGACTGCAAGCATTCCAGCTACTTGCATTTAAGAAGATGAGCAAGGTATATTTA GACGCAGTTTAATCTGAATGAAGGAAATATGATCGAAATCTTCTAATATTTATTTAATTGTAATATCATGTAATTCTACT TTCTACATTTTACTTCCCCTTAGTATGAGCAGACTAGACTGATTTCTTTTTGTGTTGTAGCTGCGGGAACTTTCTTTGAC TAACATTGGTTCAATTCACAAGCGCGCTAATCTCTCCAAGAAACTGTCTGTTCTTTCTCCTGAGGAGCTAAGGGATTTGG TTTGCTGTAAGGTGTGTGATTAATAGATGCACCTCTTCACTCCTTTTGACAATCATGATTTTGGATCTTCAATTATTCCC TATTGAGATTTGAGAATGAGAATTGATTATTACTATATTCTTATTGTTGTTGCTAATTATAGTGGCTTGCCTGGCTTCAT TTAATGTTCAGATATTCTTTTTCCTGTCTTCCTTTATACTTTTTTTTCCAATTTTGAAATTTCTTCAATTTTCCTGTTTC TTTGACGGAAGTCATGTGAAACTAGAAAGACATCAACTTCTGAAGACTAATTCATAACATCATTTTTTCCATATTTTTTT CAATGATATACTTATCTAGATAATTATGTCTTCTATCTCAGTTTAAGAGCTTGCTGAACCCTCCCTTTTAAATGCGTACC TCTTTCCTTACTTTTCATTTCAGGATTATGATACTAGAATGGGGAAGTGATTATTTGTTTATATTAGCGAACTAGCTTTT CGGAGTTTTACAGAAGGGGGCTTACATATAGTATTATAAATGGTTTGTTGATTAGTTTTAGAAATAGTATAATGAAGCTT ACAAGTGTGAGCCATGCATTGATTTCAGTACCACAATGTTTCTGACAATGTTTCTCTATGTAGCTCAAACTGGTTTCTAA GGAAGATCCCTGGTCAGAAAGGGTTGATTTTCTTATTGAAGTAATGGTGTCCTTTTTCGAGAAGCAGCTGTCTCAAAAAG AAGCTATCAATGCTCTTCCTCTTTACCCAAATGAACAGATTATGTGGGATGAAAGTGTTGTACCGAGCATAAATTACTCT GGAGAAGGTTGTTTAGCGTTACCAAAGCTTAACTTACAGTTCTTAACACTTCATGACTATCTTCTTCGAAATTTTAATCT CTTTCGACTTGAATCAACATATGAGATACGTGAGGATATTCAGGAAGCTGTACCACATCTTCAAGCATATATCAATAGTG ATGGAGAAACTGCTTTCCGCGGTTGGTCAAGAATGGCTGTGCCAATTAAAGAGTTCAGGATCACTGAAGTAAAACAACCC AACATAGGAGAAGTCAAGCCATCATCTGTGACTGCAAAAATTACTTACAGCATTTCCAGTTATAGAGCACACGTTAGGTC AGAATGGGATGCACTAAAAGAACATGATGTATTGTTTTTACTATCTATTCGCCCATCATTCGAGCCTCTTAGTGCAGAAG AAGAAGCCAGAGCTAGTGTGCCGCAGAAGCTTGGCCTACAATTTGTACGGGGATGTGAAGTTACTGAGATTCGTGATGAA GAAGGGATCCTTATGAATGATTTTTCAGGAAGGATTAAACGGGATGAGTGGAAGCCGCCAAAGGGGGAGCTGAGAACAGT AACTGTGGCTTTGGATACAGCACAATACCATATGGATGTCAATAAAATTGCTGAGAAAGGGGCAGATGATGTTTATGGTA CATTTAATGTGTTAATGAGGAGGAAGCCAAAAGAAAACAATTTTAAAGCCATCTTAGAATCAATAAGGGATTTAATGAAT GAATACTGTATTGTTCCCAAGTGGTTAGAAAACATTTTTCTTGGCTATGGGGATCCTTCTGCAGCACAATGGACTAATAT GCCTGATCTGTTGGAAGCAGTAGATTTCAAAGATACTTTTGTAGATGCTGATCACTTGAGAAAAAGTTTTGTGAATTATG AGGTTGGTATGCCATTTTCAGATTTATAGAAATTATTGTTGCCTTGGTGTGATTGATATCTTCCATCGGGAGTTATACTG TTATAGTATGAATTGAGTGTTGCTTGTCTCTAACTTCCTCTTGTATCCTTCAGGTTTCTTTCGTTAATCCTGACGGCACT GAAAACTTGAATCCAAGGCCTCCTTTTAAAATCAAACTTCCCCGGACGCTCAAAGGAAGCATTGGTTCTCATCCTGGGGG TGCAGTGCCTGCTGTTGATGCAACAAATGATATCAATGTAGTTGATGCTAATCATCAGAAAGAAAAACTAATTATTGAGA CATATACTCCACCTGACCCAGGCCCTTATCCTCAAGATCAGCCAAAACAAAATACAGTTAGATTTACACCCACACAGGTG CACTCATCTCTTAAGCTCAATCATATAATGACAGATTTTCATGTATAGTAGTATTTTCTTGATGCTTTCTTTTATCTGGT TCCTTATCCTTAGATTCAGATCACCTGCAAATAAACTGCAGATGCAGCTGGAGAGAGAACAGAAGAGAGCATGTGGGACC CACATTTTAAAAACTTTCTTTCTCTAACTGACAGCTGCAGTTCAAGTGCAGTGATCCAAATCCCATATACTTTGCCCTCA TGCACTTCATCCTCTTTTATATTATAATTATTATATCCAGTTGCAAAAAGTAAATTAATACTAATAATGTTGGATATTCC TGTCGAGCAGGTTGAAGCAATTATATCTGGCATTCAGCCTGGCCTAACTATGGTTGTGGGGCCACCTGGTACGGGAAAGA CTGATACAGCTGTACAAATTTTGAATGTTCTTTATCATAATTGTCCTTCTCAGAGAACCTTAATAATTACTCATTCAAAT CAAGCTCTGAATGACCTGTTTGAGAAGATAATGCAGGTGAGATATTTCATTTTCTCCTCTTCTATTATATGTTAAAAAAT AATTAATGCTCCACAAACTTTGTTCTATTAAAAAGAACCCATGAGTACCTCCAATTTGGTTCTTATAATAGGGAACGGAG GGAGTACAGTTTTTGGATATTAGTTGATGGAGAATAAAGACTTCCCTTATGTGTCAGCGAGTAGTTCCATATATTGAGTG TTAAGTCACTAATCACTAATCAGTAGTACTTATTAGTTTATATACTTTAGTAATTCAAGTCAGTTAATTTTCTATGTATC TGAAGGTTTTTATGTAGTTTAGTTATTAAAGAGTCAGTTACTTTTCTATGTATCTGAGTTATGTTACAATTTCGATAATT AGGTGTCTGAGTAATTATTATTAGAGTATATGCTAACCCGTTAGCTATAGTTAGTAAAAACTAATAACTGTTTGTAACAG TTTATGATAAGTGCTTGTAACAGATTCAGTTAGTTATAACTGAATCTTAACTGAATCTCTATGTTTGTATGATAGCTTTC TCAACAAGCTAAGTTGTAACACTATAAATACTGAATGATTCTCTAGTAATAATTAGCTTTTCAATCAATGAAATTCAGAT TTACAATTTAGGGTTCTTAATAATTATAGATTATGCACAAGTCAACTAAAAACACAATAGTGGTTCATTGTAGTTGAAGT GGATTGCGAGCTGAACTTCTCTTGCAATATCAAGAATTGGAATCTTGAAGTCGTCTCTCTAGGCCTAGGGAGGGTTTTAC CTAACCACCACTCCGAGCCCAAATCATTAGTTTCGCAGCTATGTCCGTGGGGATATCTGTTCAAAGATCCAAAGAAGTTA GTTAAAACGAAACTAATTAAGCCACTTTAAGATGGTCAATTCTAGCTACTTAGAGTCTAAAAAATACATTGAGTGAGACT CTTTGTAATTTCAGGAGAAATTGGAATTCAGAATCAAGTTAAGTATATTATAAAAAAATCTTTTGTTGTCTTCAATTTTA AGATTATAATTCTAAGGGCTATTATTCCTATCCAAAGAACTGGACTCTAATCCTGCAACACTCTTTCCCCCAAATACTTG CCTAACCTTTTTTCATAACTTCCCTTTCATTCCTTCCCTAAATTTAAATATTCCTGCACTACATCAGTTTTGATAACTTC AGGGACTATCTTGTGCTCCTATGGCAACATGAATGGTAGAGATTTCTGTGTTAGTTGAAGAGATGACTTGTTGCTATTGC TATAGATTGAAGTATATTCAGAATATATCTTATGGTGTTTCTTGTCAATTTATGATTTGTTGGTTTTATTTTAACGTGAA AGGAGAAAGTAGCAGGAGAGAACAAGATGAGAGAAAATAAGCAACAATTGCTGCAAAGGATAAATTTTATTGATGCTACT TAATTATTTAAATACACTTGAAATTAACGAAATAGAAGATAAGTCTCCATTACTTTAGTGACTGACTCACACCTAATCAT AATAAAGAGAAAATATCTTATCTCTTAACAAACTTAAATCTAATATCTTAATAAATTTAAAAACTCAAACAGCTACTGAG ACATAATCTCAACAATGATAAACATTTTTCTGATCTGGTAGATTTCTACAATCCCACACACACCTATATCCCACATATCT ACCTCTCGTATTTCTTTATTTCCCATTCCTTGCAGTTTGAGGAATCTCTGGGCAACATTATTAATGTTGGGCTAATGTCT TGTACTAGTGCAGGTCGTTATGTGTGTATAAGTGTTTGCAATTAATAAACTATTGTTTTCATTAAGATGTACTTTATGAC TTCATGTGTAATATATATATATATATATATATATATATATATATATATATATATATATTGTATTGAAGTTTCGCGCTAGT GACAATCTTCATGATACAATTCGAGTAATATCTTAAATAGTTGATACTACTAAGTTTATATTCAAACAGAATTAAGAAGT AATATCAAAATGCTATATTTTTTTTTGATATGCCAAAGAAGATGCATTATAAGGGAGTGGGAGTACAAGGGGTACTCCAA CCCATAATACAAAAGGAACAAAAAGGATAAGAAAACACATAGAATGCTATATAAATATAACATACATGCTGTTGATCTGA GTTGAAAAGTTACATAAGCAACCACCATGGTATTTGGTGGAAGATAAACTCAGTCCTTTTGTATTGCTTTTCTCCTTTTG ATTTACCAGTTCTTAGGTCTAACATGAGTTTAATACCTATAATTTTGGTTAAAGTTTGCTGTCTAACAGAAGTTTATGTG TTCCTTTTTACTCGTTTCTATATTAGAGAGATGTACCTGCACGATATCTTCTCCGACTTGGTCAAGGAGAACATGAACTA GAAACTGATCTAGATTTTAGTCGACAAGGTCGTGTTAATGCAATGCTTGTTAGACGTCTAGAATTGCTTAGTGAAGTGGA GAGGCTAGCAAGGTCTCTTAATTTGCCAGAGGATGTGGGTTACACTTGTGAAACTGCAGGATACTTCTGGTTGCTTCATG TTTATTCACGCTGGGAGCAATTTCTTGCTGCTTGTTCTGAGAATAACGAAAAGCCAACATTTGTTCGAGATCGTTTTCCC TTTAAAGAGTTCTTCTTTGACACACCACATCCTGTATTTACCGGCGAATCTTTTGAGAAAGACATGCGGGCTGCTATGGG ATGCTTTCGTCATCTGAAGACTATGTTTCAAGAACTCGAAGAGTGCCGGGCATTTGAATTACTTAAGTCAACAGCTGATA GGGCTAACTACTTAATGACCAAGCAGGCCAAGATTGTGGCAATGACTTGTACTCATGCAGCTCTGAAGAGGAAAGATTTC CTTCAGTTGGGTTTTAAGTATGACAATTTGTTGATGGAAGAAAGTGCTCAGATTTTAGAAATTGAGACTTTCATACCAAT GTTACTCCAGAGGCAAGAAGATGGTCATGCTAGGCTTAAACGCTGCATTCTGATTGGTGATCATCACCAGTTGCCTCCAG TTGTGAAGAATATGGCTTTCCAAAAGTACAGCCACATGGATCAGAGTCTGTTTACTAGGTTTGTCCGTTTGGGCATTCCT TACATTGAGCTAAATGCTCAGGGAAGAGCCAGACCAAGTATAGCTAAACTCTTCAATTGGAGATACAGAGATTTGGGAGA CCTTCCTATTGTAAAGAAGGAAGTCATATTCAATAGGGCAAATGCTGGGTTTGCTTATGATTATCAGTTAGTGGATGTTC CAGATTACATGGGTAAGGGGGAGACAACTCCATCTCCATGGTTCTACCAAAATGAGGGAGAAGCAGAGTATGTTGTCAGC GTCTATATATACATGCGTCTGTTAGGGTATCCTGCTAATAAGATATCAATTTTGACTACTTACAATGGCCAGAAACTTTT GATCCGTGATGTTATAAGCCGGAGATGCACTCCATTTGACTACATTGGTGCACCAAGCAAGGTATGCTCCTCATTCTTTA CTTAATTAGATCTTAGATTAAATTTCTAAATGATTTCTTTGATGTAGTTGGTTTCAATTTATTATAGAAATTCTAGTAGT AGTAGAACATTAGAACTCAACAAGACAGATTATAGCAATGTTGTGATCTTAATCAAGTTATCTTTGTTTTCTTTTCATTT GTGCTCTCAGGTTACTACGGTGGATAAGTTTCAAGGTCAGCAAAATGATTTTATTTTGCTGTCTCTTGTGCGAACTCGAT TCGTTGGTCACCTACGTGATGTAAGAAGATTGGTTGTTGCCATGTCACGAGCTCGGCTGGGTTTATATGTTTTTTGCCGC CGTTCCCTTTTCGAGCAGTGCTATGAGCTGCAGCCTACATTTCAGCTTCTTCTGAAGAGACCTGACCACCTTGCCCTTAA TTTTAGTGAGATTACATCATGTACTGAACGAGATGTTGAAGATCCTGGACCTCATATACATCTTGTCAGTGGCATTGAGG AGATGAGTAGTATCATAGAAAGGCTGTGTCAGGTATGTCACTTCTTGTGATAATAGACCTTCATTTACAAGTACAATATG ACACAGACATGGTGATGTGAATAACTCAGAAAATTATAGGGCACAGACTAGGTTTTTAGTACAGTAATGTTAATATAAAA TGGCAATGTCGAGACACATAATTCATGTTTTGAAAATTAGCATGAGACTGTAAGTCTTATTAAATATAATAAATGGCTCT GGTTTATCTGA
CDS sequence (LotjaGi2g1v0024500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGAAAGTGCACGGCACGGGAACATACGATTTCCGCCGCCATAGAGTGGCGGAGTATCCGGTGGCAGCGGAGCCGAA ACCAGTAGAGTGGAGTCAAAAGAGTGGCGGTGCTCTTCCCAGCACACTCACAGTATCTGAGATTCAACGTGACAGGTTGA CCAAGATTGCAGAGGAGAATTGGTCGAAGAAGAAGAAGGAGAAAGCGTTTGATGCGGAGGTTGTTGAGAAAATCTACGAA AGTGAGTTGTTGGTGAAAGAGGGTCAGGGTCACAAACCCGTTCCTTTGCAGAGGGTCATGATCCTTGAGGTTAGTCAGTA TCTCGAGAATTACCTCTGGCCCCATTTCGACCCTCTCACTGCTACCTTCCAGCATGTTATGTCCATCATCCTTATGGTCA ACGAGAAGTTCCGCGAAAATGTCGCCGCTTGGGTTTGCTTCCATGAGAGGAAAGATGCCTTCAAAGGGTTTCTTGAGAGG GTTCTTCGCGTAAAGGAGGGAAGAGAACTAAGTATAGCAGAGAAGACAAATTACCTAATTTTCATGATAAATGCCTTCCA GAGTTTGGAAGATGAGGTTGTTAGCGAGACAGTCTTGAAACTAGCAAGTTTGAAATCCTGGTATAGTTTGTCTTATGGTC GTTTTCAGATGGAGCTTTGTCTTAATCCAAGTTTGATCAAGAAATGGAAAAGGATGATAAAAAAGGAATCAGGGAAAGGA GGACACCATTCTGATCAGTCAACTGCGGTTGAAGTTATGTTCTTGAGGAACCTCATAGAAGAATTTCTGGAGATATTGGA TTCACAAGTGTTTCCCCAGAGGCAGTTGTCTGGTGAGAATGATGAACTTATTGATGGTGCTGATTTTGGTGTAGTTAATG ATGCTTGTGTCCTTTATTGTGAGAGGTTTATGGAATTTCTTATTGACCTATTGAGTCAATTGCCAACGAGAAGGTATTTG AGGCCTCTAGTGGCTGATGTAGCTGTAGTTGCCAAATGCCACCTGAGTGCGCTCTATAGGCATGAAAAGGGAAAACTTTT TGCCCAATTGGTTGATTTATTACAATTCTATGAAGGGTTTGAGATTAACGATCATACTGGCACACAGTTAACAGATCATG AGGTTCTCGAATCTCATTACAGCCGACTGCAAGCATTCCAGCTACTTGCATTTAAGAAGATGAGCAAGCTGCGGGAACTT TCTTTGACTAACATTGGTTCAATTCACAAGCGCGCTAATCTCTCCAAGAAACTGTCTGTTCTTTCTCCTGAGGAGCTAAG GGATTTGGTTTGCTGTAAGCTCAAACTGGTTTCTAAGGAAGATCCCTGGTCAGAAAGGGTTGATTTTCTTATTGAAGTAA TGGTGTCCTTTTTCGAGAAGCAGCTGTCTCAAAAAGAAGCTATCAATGCTCTTCCTCTTTACCCAAATGAACAGATTATG TGGGATGAAAGTGTTGTACCGAGCATAAATTACTCTGGAGAAGGTTGTTTAGCGTTACCAAAGCTTAACTTACAGTTCTT AACACTTCATGACTATCTTCTTCGAAATTTTAATCTCTTTCGACTTGAATCAACATATGAGATACGTGAGGATATTCAGG AAGCTGTACCACATCTTCAAGCATATATCAATAGTGATGGAGAAACTGCTTTCCGCGGTTGGTCAAGAATGGCTGTGCCA ATTAAAGAGTTCAGGATCACTGAAGTAAAACAACCCAACATAGGAGAAGTCAAGCCATCATCTGTGACTGCAAAAATTAC TTACAGCATTTCCAGTTATAGAGCACACGTTAGGTCAGAATGGGATGCACTAAAAGAACATGATGTATTGTTTTTACTAT CTATTCGCCCATCATTCGAGCCTCTTAGTGCAGAAGAAGAAGCCAGAGCTAGTGTGCCGCAGAAGCTTGGCCTACAATTT GTACGGGGATGTGAAGTTACTGAGATTCGTGATGAAGAAGGGATCCTTATGAATGATTTTTCAGGAAGGATTAAACGGGA TGAGTGGAAGCCGCCAAAGGGGGAGCTGAGAACAGTAACTGTGGCTTTGGATACAGCACAATACCATATGGATGTCAATA AAATTGCTGAGAAAGGGGCAGATGATGTTTATGGTACATTTAATGTGTTAATGAGGAGGAAGCCAAAAGAAAACAATTTT AAAGCCATCTTAGAATCAATAAGGGATTTAATGAATGAATACTGTATTGTTCCCAAGTGGTTAGAAAACATTTTTCTTGG CTATGGGGATCCTTCTGCAGCACAATGGACTAATATGCCTGATCTGTTGGAAGCAGTAGATTTCAAAGATACTTTTGTAG ATGCTGATCACTTGAGAAAAAGTTTTGTGAATTATGAGGTTTCTTTCGTTAATCCTGACGGCACTGAAAACTTGAATCCA AGGCCTCCTTTTAAAATCAAACTTCCCCGGACGCTCAAAGGAAGCATTGGTTCTCATCCTGGGGGTGCAGTGCCTGCTGT TGATGCAACAAATGATATCAATGTAGTTGATGCTAATCATCAGAAAGAAAAACTAATTATTGAGACATATACTCCACCTG ACCCAGGCCCTTATCCTCAAGATCAGCCAAAACAAAATACAGTTAGATTTACACCCACACAGGTTGAAGCAATTATATCT GGCATTCAGCCTGGCCTAACTATGGTTGTGGGGCCACCTGGTACGGGAAAGACTGATACAGCTGTACAAATTTTGAATGT TCTTTATCATAATTGTCCTTCTCAGAGAACCTTAATAATTACTCATTCAAATCAAGCTCTGAATGACCTGTTTGAGAAGA TAATGCAGAGAGATGTACCTGCACGATATCTTCTCCGACTTGGTCAAGGAGAACATGAACTAGAAACTGATCTAGATTTT AGTCGACAAGGTCGTGTTAATGCAATGCTTGTTAGACGTCTAGAATTGCTTAGTGAAGTGGAGAGGCTAGCAAGGTCTCT TAATTTGCCAGAGGATGTGGGTTACACTTGTGAAACTGCAGGATACTTCTGGTTGCTTCATGTTTATTCACGCTGGGAGC AATTTCTTGCTGCTTGTTCTGAGAATAACGAAAAGCCAACATTTGTTCGAGATCGTTTTCCCTTTAAAGAGTTCTTCTTT GACACACCACATCCTGTATTTACCGGCGAATCTTTTGAGAAAGACATGCGGGCTGCTATGGGATGCTTTCGTCATCTGAA GACTATGTTTCAAGAACTCGAAGAGTGCCGGGCATTTGAATTACTTAAGTCAACAGCTGATAGGGCTAACTACTTAATGA CCAAGCAGGCCAAGATTGTGGCAATGACTTGTACTCATGCAGCTCTGAAGAGGAAAGATTTCCTTCAGTTGGGTTTTAAG TATGACAATTTGTTGATGGAAGAAAGTGCTCAGATTTTAGAAATTGAGACTTTCATACCAATGTTACTCCAGAGGCAAGA AGATGGTCATGCTAGGCTTAAACGCTGCATTCTGATTGGTGATCATCACCAGTTGCCTCCAGTTGTGAAGAATATGGCTT TCCAAAAGTACAGCCACATGGATCAGAGTCTGTTTACTAGGTTTGTCCGTTTGGGCATTCCTTACATTGAGCTAAATGCT CAGGGAAGAGCCAGACCAAGTATAGCTAAACTCTTCAATTGGAGATACAGAGATTTGGGAGACCTTCCTATTGTAAAGAA GGAAGTCATATTCAATAGGGCAAATGCTGGGTTTGCTTATGATTATCAGTTAGTGGATGTTCCAGATTACATGGGTAAGG GGGAGACAACTCCATCTCCATGGTTCTACCAAAATGAGGGAGAAGCAGAGTATGTTGTCAGCGTCTATATATACATGCGT CTGTTAGGGTATCCTGCTAATAAGATATCAATTTTGACTACTTACAATGGCCAGAAACTTTTGATCCGTGATGTTATAAG CCGGAGATGCACTCCATTTGACTACATTGGTGCACCAAGCAAGGTTACTACGGTGGATAAGTTTCAAGGTCAGCAAAATG ATTTTATTTTGCTGTCTCTTGTGCGAACTCGATTCGTTGGTCACCTACGTGATGTAAGAAGATTGGTTGTTGCCATGTCA CGAGCTCGGCTGGGTTTATATGTTTTTTGCCGCCGTTCCCTTTTCGAGCAGTGCTATGAGCTGCAGCCTACATTTCAGCT TCTTCTGAAGAGACCTGACCACCTTGCCCTTAATTTTAGTGAGATTACATCATGTACTGAACGAGATGTTGAAGATCCTG GACCTCATATACATCTTGTCAGTGGCATTGAGGAGATGAGTAGTATCATAGAAAGGCTGTGTCAGTGTAAGTCTTATTAA
Protein sequence (LotjaGi2g1v0024500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTKVHGTGTYDFRRHRVAEYPVAAEPKPVEWSQKSGGALPSTLTVSEIQRDRLTKIAEENWSKKKKEKAFDAEVVEKIYE SELLVKEGQGHKPVPLQRVMILEVSQYLENYLWPHFDPLTATFQHVMSIILMVNEKFRENVAAWVCFHERKDAFKGFLER VLRVKEGRELSIAEKTNYLIFMINAFQSLEDEVVSETVLKLASLKSWYSLSYGRFQMELCLNPSLIKKWKRMIKKESGKG GHHSDQSTAVEVMFLRNLIEEFLEILDSQVFPQRQLSGENDELIDGADFGVVNDACVLYCERFMEFLIDLLSQLPTRRYL RPLVADVAVVAKCHLSALYRHEKGKLFAQLVDLLQFYEGFEINDHTGTQLTDHEVLESHYSRLQAFQLLAFKKMSKLREL SLTNIGSIHKRANLSKKLSVLSPEELRDLVCCKLKLVSKEDPWSERVDFLIEVMVSFFEKQLSQKEAINALPLYPNEQIM WDESVVPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPHLQAYINSDGETAFRGWSRMAVP IKEFRITEVKQPNIGEVKPSSVTAKITYSISSYRAHVRSEWDALKEHDVLFLLSIRPSFEPLSAEEEARASVPQKLGLQF VRGCEVTEIRDEEGILMNDFSGRIKRDEWKPPKGELRTVTVALDTAQYHMDVNKIAEKGADDVYGTFNVLMRRKPKENNF KAILESIRDLMNEYCIVPKWLENIFLGYGDPSAAQWTNMPDLLEAVDFKDTFVDADHLRKSFVNYEVSFVNPDGTENLNP RPPFKIKLPRTLKGSIGSHPGGAVPAVDATNDINVVDANHQKEKLIIETYTPPDPGPYPQDQPKQNTVRFTPTQVEAIIS GIQPGLTMVVGPPGTGKTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMQRDVPARYLLRLGQGEHELETDLDF SRQGRVNAMLVRRLELLSEVERLARSLNLPEDVGYTCETAGYFWLLHVYSRWEQFLAACSENNEKPTFVRDRFPFKEFFF DTPHPVFTGESFEKDMRAAMGCFRHLKTMFQELEECRAFELLKSTADRANYLMTKQAKIVAMTCTHAALKRKDFLQLGFK YDNLLMEESAQILEIETFIPMLLQRQEDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYIELNA QGRARPSIAKLFNWRYRDLGDLPIVKKEVIFNRANAGFAYDYQLVDVPDYMGKGETTPSPWFYQNEGEAEYVVSVYIYMR LLGYPANKISILTTYNGQKLLIRDVISRRCTPFDYIGAPSKVTTVDKFQGQQNDFILLSLVRTRFVGHLRDVRRLVVAMS RARLGLYVFCRRSLFEQCYELQPTFQLLLKRPDHLALNFSEITSCTERDVEDPGPHIHLVSGIEEMSSIIERLCQCKSY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 34 | 1435 | 1402 | 0.0 | ||
| Pfam | 49 | 870 | 822 | 0.0 | ||
| PANTHER | 357 | 1433 | 1077 | 2.6E-271 | – | |
| PANTHER | 357 | 1433 | 1077 | 2.6E-271 | ||
| SUPERFAMILY | 863 | 1377 | 515 | 1.82E-52 | ||
| CDD | 865 | 1217 | 353 | 5.33073E-118 | – | |
| Pfam | 873 | 1171 | 299 | 2.2E-27 | ||
| Pfam | 1180 | 1371 | 192 | 1.8E-24 | ||
| Gene3D | 1204 | 1398 | 195 | 2.3E-28 | – | |
| CDD | 1205 | 1388 | 184 | 1.00045E-48 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | MRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. | ||
| Cellular component | Spliceosomal complex | Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA. |
Expression pattern of LotjaGi2g1v0024500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…