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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0059700 |
| Transcript ID | LotjaGi2g1v0059700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent zinc metalloprotease FtsH; TAIR: AT3G02450.1 cell division protein ftsH; Swiss-Prot: sp|Q9M895|FTSI3_ARATH Probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic; TrEMBL-Plants: tr|I1N6J7|I1N6J7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0059700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:12434775..12441693) extracted from Lotus japonicus Gifu genome v1.2.
GTTAGCAGGATAGTAACAGTGTCACCAACACCAACACCAACGCCAACGAGTGAAGCTTTGTGTTCGTTCCTCTTCCTCGA ATTTGAGACACCCACGATTCCAGTTTTTGTCTTGAATTTGTGTTAGTTTGTGTTTGAGATGAGGTAACATTCAATCTTTA TTTGTGGGGGATAAATATAATGCACTAGCAGATTCTATGGTTATATAGCTTTGCTTGTGGAACAGCATGGCTTTTCTTTC TTTGCCTTGCAGTACTGGGTCATTTGTTACCCCTGATATGTTAAAGATAAGATATTTTGGGGTAGATGGAAATTTCTGCA CTCGTTCATTTGCTTGGAAGCAGAAGCTTGAGTTTTGTGAAAGAAAAAGTAGAATTCCCTCATTCAGGTTTCCTTGTTGT TTCAAGTCACAACATGGTGTTTCCAGCAACAATAAAATTGAGCCGCTTGTGAGTAGAACCAGGGGTGACGGAAAGGCGCA GAGTGGTAAAGGGGAAAGTAATAGGTTGAAGAACAGATTTTCATTGAGATTGCGGCCGAGGTTACGGTTATTAGCTATGA GAATGAAAAGGACTTCCATTGAATCCATTTTGAATGAGGTGGGGATCTTCGTTCGTAGGAACATTAGGACAGTGGCATTT TCTACCTCATTTTCTTTAGTGTTTGGCCTTTGTTTCATGTTTTTGAAATTGACAGCGCTCCCCCCTCAAAAAATTGTTCC ATATTCGGAATTGGTTACAAGCCTTCAAAATGGGTCTGTTGCAAAAGTATTAGTTGAAGAGGGATCTCGGCGTATATATT ACAATATGAACTCCGAAACTGTTGAAAACGATCAGGTTTCCGGTGAAGAATCACAAGGAGCAGATGTTTCAATTGATAAG GATATAAATCAGGTTGGGAGTGAGGATACTTTAAGAGCTGGCCAAACTCCAGTGGTGAATAAATTGAATAAATTCTCCAG GACTCGATCTTCTATTCCTCAGTGGCAGTATTCCACAAGAAAAATCGAGCATGATGAAAAGTTCCTTATTAGTTTGATGA GAGAGAAGGGAGTTACATATAGCTCTGCCCCTCAATCTGTGTTAATGTCAATGAGGAGTACTTTGATAACTGTGATCACA CTATGGATACCTTTAATTCCATTGATGTGGCTTCTGTATCGTCAACTTTCTGCTGCCAATAGTCCTGCAAGGAAGCAGAA ACCGAATAGTCAGACAGTTGGATTTGATGATGTGCAAGGTGTTGATTCCGCAAAAGTAGAACTCATGGAGGTAATTATCT CATATTCTAATGTTTATAATAATTATGCGCTAAAAGTGATTTTTGCTATTCTGCTAGTTTTTATTTTATAAGAAGTGACA GTTCCGGCTGACTTGATGCATTTTCCTTAATTGGGGAATTTACTGTGGTATTAACTATTAAGTACAAGCTCCGTCTGTAA GCATTCATCATCAGTATCCCTTATTTTTAGTAGGATTAAGAATGCTGAGGATGTCTTTATCTTTTTTCTCTCAAGTTTTA AAATCCTGTTGCCTGAAATAGTGAAGTATACTTATCAGTTTATAACACAACTAGAGGAAATGTGGGAACATCATTTTGGA GAAGTTCAGCAAGGTTAACCAACTTGGTAGTGTAAAGAATAACATTGTTGGCAAAAAGTAGTAGTTCACTTGAAATTAAC AGTATGTTTTAATGTCATTAGCTTCCATGTTTTAATTCATCACATGGAAACTGGAATTAGAGATCAATTGATGAACTTTT AGCTTATGACATGGCACAAAAGCAAAAAGTTTTTACTATCAGGAGCTAAGAAAGTCCACCTGTGACATCCCTAAAACTCT CTTTTATTACAATGTGGATTCAAAGTCATACAAATATGAGGACTTTCTTGCAAAACTAAATCAATGCCACACAGGATAGA TACAGAACTGAAATACTTCAATTGATCAAGTCAGTAACATAAGTTTGATAGTAGGAGATGAATCTGATAGGTACACGGGT TAGCTAGTTAGTATTAGATTTTATTATTAGTATCTTTTATCCAGTCAGCATTATATTTTATATTTTATTAGGTTTAGCAT AATTAGAGAGTGAGTATAAATAAGTGAGTTAGAGAGACTATTGAGTATCTTGGTATTCACTTTGGAATTAGGGTTTAGAG AGCGTTGGGTCTCTCTGGTTCTAGGGAGGGTGTTTGGGATCCCTTTCCTTGTATCTTTCCCCCAATTCCTATTTGGGAAT TAGGGTTTTACCATTGAATAATATCAGATTTGGCTGGGTTCTATCAGAATCATTTCATGAAAGAAAAAGCCCAAAAGACA ACCGCGAGGTACGAACAAATAGTCCTAAACTAGTCATGGAAAAATATAAACATAAATGCATGGGGGTATGATACAACTTG TTCAGAACTAAGAAGAATGAATGCATCTTGTATGGAGAATTCTAGCTAGAAAGTCAGTATTGCCCAATGTTGACAAACTG ACCCTCTACATTGGTCCTGGTCCCTCCTTTACCTCAACTAACTTCTCTAGATCTCATGTTTTCTACAAATGGCTTATAAA TATCCAATACAAAATGTGATCTCCTTAACTAACTTCTAACAGCACAAACTAACTCTCACTCTGTTAATATTATTCTGTTA CTCCTAACTAGCTATACCTATCAATACGCCCCTTTAAACTTTCGCCTCGTCGTCAAAGCTGAACAACATGGATAAACTGA AAAGAAGAATGCCAACATGGTCTGTGTTACGCATATAAATAGGGATTGGCCTTGTAATTGAGATATGTTGAATATTGTTG AGATAATGAAACCCCTTCTATCCCTTTGTTCTCTCTTCTCTGTCCCTATTCCCTCTCTTCTCCCTCTCTGAGATTCTGGT TGTATCATTGGTATCAGAGCATCGATCCGGTGCACCTGAACCAGAAAATCAAAAAGAAAAAAATGGATGCAGATTGGTGG AAAGCCCTCGACAGGCTTGATGAATCCCTGAAGCGTTCCCATGAAGCAGCTCGCCTACGTGAAGAAGTTCGCCGGCGAGA AGAAGCGGCAGCGGCGTATGAGCGGCACGTGGCCGAATACGAGCAGTACATGGCGGCATACGAGCGGTACGAAGCCAAAG CGGCAGCGGTCGCTGAACATGAAGCCGCGGCGGAGCGCGAGGCTATGGCCGCAGAGGAGCAAGAAGCGGCAGCGGCGGTA GAACGAGAAGTGGAAGCAGAACGAGAGCGTGCTACGGCTGAGGCTGAAGAAGATGCAGCGGAGAAGTACGAACAATCGGC GACGGTCACCGTCTTCTTCGGTTCTTCAAAGGCGTTTTCGTTTGGGTTCTTGAACAAATCCAGCGTTCTTCCCAAAATCA ACGCCGTTCTTCCTCAATTCAATGTCGTTCTACCCCAATTTCATGATTTAGGGCTCGAAATCGTTTTCCCCCAAATCAGC GATTTAAGGTTTGCGGTTTCGCCCAAAATTGGGAACTCTGTGCTCAGCGGCGATGTTCTTGGTGATTGTGGTGGTGATTC AGCGATTGACGGAGCAGGAAGGCCTCCACGGAAGCCTCCAGATTCGGAAAGTGAAGAAAGTAGGTAAAGAGCATAGAGAC TTGTTGCTTCCGCTTATGCTGGATTCACCGAATCATTGGCTTTGTCTTCTTCAGTGAGAAATAGAAGACAAATGTCCAGA TTTGCAACAAACAGTTGCAATTTGTGAGCTCTGGTTACACACTACTTGTTGGCTCCATACTCCGGTGAATGGAACAGTGC AGGGGGTCACCATACCTTAGACATGTTGGGTGACCCTTTATTTATAAGCGATGTTGCTACCTTGGCTGTTTCTCCCCCTA TTTGGGATGTTTGAGATATTCGGGGAGCTATTCTTGGACGATCTGGATTCTCCCTTATCTCTTTGCCTCGGGATATAGTC TATTGAACTTGGGCCAATTCGGCCTACACTTTTGCTCGAGCTAGGAGTGGCTGGGCCTGGCTGGGATCTGGGCCCAAGAG TTTGGCTTGTAACAAGGTCTAAATTATAATAATTGGAAAATTAATTTCCCGTGCAACTAGTTAATTTTTTTTATCCAATG CCTTCATATGTTGATTATTTCTAAGTTTGACAGATTTTTTCTTGTAAATGGTGAAGCAACTTTATTGTTCCCTTTTGATG GACTCTTTCCCTTTTCTGTAGATAGTTTCATGTCTGCAAGGGGATATAAATTACCAAAAGGTGGGGGCGAAGCTACCTCG AGGTGTGTTGCTGGTAGGTCCTCCTGGAACTGGGAAGACGTTACTTGCACGTGCGGTGGCAGGGGAAGCAGGTGTACCCT TTTTTACTGTATCTGCCAGTGAGTTTGTGGAATTATTTGTTGGAAGAGGGGCAGCTAGAATCAGAGACCTTTTCAACACT GCAAGGAAATTTGCACCATCAATTATATTCATTGATGAACTTGATGCTGTTGGAGGTAGGCGTGGAAGAAGTTTCAATGA TGAACGTGACCAAACGCTGAACCAGGCAAGCTTACTCAATAATTGTAGTTCTTTTGTAGCAACAAACTGTCAAAAGTGGT TATGACTTACTACTGCTGAACAGCTATTAGTGGGTTTCTGCTGTTTAAACATAATTAACTTATTGAAAATTGTGTTATTC CATGTTGTCAAATTTTCTTTTAATACAGAGTTCAAATACCACTGTTAATTCCTCCTATCTTCCCATCTTCCTTTTACCTT CTTTCTTTAATTTTTTATATTAAAAAATTATTTCACCATAAGCAAACGCGGACACTTAAAAATAGTATTTATGTCCGTTT TATATCAGTATGGGATATATCTAACACTTCATGGACAGTTGGACACCTTGGGTAATTGTAGTTGTATTTTGCAATTTTTC ACTTCTACCTTTTGAACTTTGATACTAATAGATATGAGAATATCACGATAATTGAAGAAATCATTGCTTTGTAAGATGTC TACAATGACTCATGCTACTTTTTAATTACCGACTTTCATATTTGGTTTAAGATCTGATTTGTGTTTTTATATTAATTATA TACCAGTTTTGTTGTGTTATTGGTGTATCATACTCTGTAAATTTTGTAATTTGTCATATATCTCTGTTTGTGTTATATAG GTTTCGTGTCAGACTCACGTCCTATGTTGTCTTCTTGCTTTCCAACAACAATCTTGCTGAAAATTTCTACAAGTCCAGTT TCTTCATCAATTATTCCATAGCATTAGCATATACTTGCTATATGAAAAACGAATATTCTGTATGTTGCTTGGGTTTAAGT GCGAGAGTTAGAAGAATTTCCATGTGCTCACAATACTTTCTATACCTTTAATGTGTTTTCTGTCTTCGCAGTTGCTAACA GAAATGGATGGATTTGCATCCGAGATGAGAGTGGTTGTCATTGCAGCAACTAACCGACCAGAAGCATTGGATCCAGCCTT ATGTCGCCCGGGTCGTTTCTCAAGAAAAGTATATGTAGGGGAACCAGATGAAGAAGGGAGGAGAAAGATATTAGCAGTAC ATCTAAGGGGAGTTCCTTTAGAGGAGAACGCTAACATCATTTGTCATTTAGTTGGTTCTCTTACTGCTGGCTTGGTAGGT GCTGATCTGGCAAACATTGTCAATGAAGCTGCTTTGCTTGCTGCTCGTAGAGGTAAGACCAACTCACAATATTACTCAAG TCATACAGCATATTGCATTTCACCAATTCGTATGCCTTAGTGTAACGTGACTCATGTTAAATTATTTGACCATGATGCCA TTTGGATACAGACTGAAGAGCACTTATTGGAGCTTATCTACTAGAAAAAACACTGAATTATCAGTTAGAGATCCAATAAG TGCTCTTTGGTCTGTAGCGGGTTCCATATATTGTGACACGTAATCCTGTCTTAGTCAGTTTTAGAAATCCCTTCTGCATT TCTCTGCCGATTGATTTTCCTTGTGCGATTAAAAGATGATATTTATATACTTTCAAATCTCTATTGAATTTAATAGCAGT TATCAGTTAGTGGATATTTGGAATAGAGTTTGCATCTTTCAAACCCCAATTTGGGGTGTGTAAACTAAGTTTCATCTGGC AAGATCACATTGACTTACATTTGAACATGATTTTGAGTCTCAAACCATGATTTGAGTAAAAAAAGTATTTACTTTTCCAT TGGATCTGTCATGAGCCAACTATCCCAGAAGTTTAAGTTCTTGAATGAACACACATGAATTTATTATATTATATTTTTAA TGTGCCCCTTTACGCAAGAACTCATTGCGCTTAAAGCGTGAACAATGCCTTTGTCTTGTAATTCAGTTTTTTTTTTTAGA ATAATGGAGACAAAAAGGATTGAATTCTATACCACTTGGTCATAGAGGCTTTATGAACCATGTCCAAAAAGCTTAAGCTG TTGATTGAAGACAAATGAATGGTTTTATATTATATTTCTAACTGGACCAGGTCATTGTTTCTAAACTATTATTGAGACAT GGTCTTAGTCATATGTATACATTTGGACTTTGCAGGTAGTGAAACTGTGGCTAGGGAAGACATAATGGAAGCGATTGAAA GAGCAAAGTTCGGAATCAATGATAAGCAATTGAGGTCTAGTAAAATAGGCAAGGAGCTAAGTAAGCTATTCCCTTGGATG CCGTCATTGATGGGAAGAGGTGATAGGAGACAGGATGACCTGCAAGGACCATTAGGTTATCAATCACTGAATTCATGAAT GGACTTGCTTGTTAAATTTACTTATAGTTTATTTAAAATTTCCCCCTGTAATTGTTCCCTGATTTTCTTTTATGCTAGAA ATTTTGTTTCCCCTATACATGATGCTTAAGAGTAAGAATACGTTGTCCATAGAGAGTGAGAAGTTGTCTTCATTTAAGTG TGTATCAATACAAGTTAAACTTAAATTAAAAGTACATTT
CDS sequence (LotjaGi2g1v0059700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTTCTTTCTTTGCCTTGCAGTACTGGGTCATTTGTTACCCCTGATATGTTAAAGATAAGATATTTTGGGGTAGA TGGAAATTTCTGCACTCGTTCATTTGCTTGGAAGCAGAAGCTTGAGTTTTGTGAAAGAAAAAGTAGAATTCCCTCATTCA GGTTTCCTTGTTGTTTCAAGTCACAACATGGTGTTTCCAGCAACAATAAAATTGAGCCGCTTGTGAGTAGAACCAGGGGT GACGGAAAGGCGCAGAGTGGTAAAGGGGAAAGTAATAGGTTGAAGAACAGATTTTCATTGAGATTGCGGCCGAGGTTACG GTTATTAGCTATGAGAATGAAAAGGACTTCCATTGAATCCATTTTGAATGAGGTGGGGATCTTCGTTCGTAGGAACATTA GGACAGTGGCATTTTCTACCTCATTTTCTTTAGTGTTTGGCCTTTGTTTCATGTTTTTGAAATTGACAGCGCTCCCCCCT CAAAAAATTGTTCCATATTCGGAATTGGTTACAAGCCTTCAAAATGGGTCTGTTGCAAAAGTATTAGTTGAAGAGGGATC TCGGCGTATATATTACAATATGAACTCCGAAACTGTTGAAAACGATCAGGTTTCCGGTGAAGAATCACAAGGAGCAGATG TTTCAATTGATAAGGATATAAATCAGGTTGGGAGTGAGGATACTTTAAGAGCTGGCCAAACTCCAGTGGTGAATAAATTG AATAAATTCTCCAGGACTCGATCTTCTATTCCTCAGTGGCAGTATTCCACAAGAAAAATCGAGCATGATGAAAAGTTCCT TATTAGTTTGATGAGAGAGAAGGGAGTTACATATAGCTCTGCCCCTCAATCTGTGTTAATGTCAATGAGGAGTACTTTGA TAACTGTGATCACACTATGGATACCTTTAATTCCATTGATGTGGCTTCTGTATCGTCAACTTTCTGCTGCCAATAGTCCT GCAAGGAAGCAGAAACCGAATAGTCAGACAGTTGGATTTGATGATGTGCAAGGTGTTGATTCCGCAAAAGTAGAACTCAT GGAGATAGTTTCATGTCTGCAAGGGGATATAAATTACCAAAAGGTGGGGGCGAAGCTACCTCGAGGTGTGTTGCTGGTAG GTCCTCCTGGAACTGGGAAGACGTTACTTGCACGTGCGGTGGCAGGGGAAGCAGGTGTACCCTTTTTTACTGTATCTGCC AGTGAGTTTGTGGAATTATTTGTTGGAAGAGGGGCAGCTAGAATCAGAGACCTTTTCAACACTGCAAGGAAATTTGCACC ATCAATTATATTCATTGATGAACTTGATGCTGTTGGAGGTAGGCGTGGAAGAAGTTTCAATGATGAACGTGACCAAACGC TGAACCAGTTGCTAACAGAAATGGATGGATTTGCATCCGAGATGAGAGTGGTTGTCATTGCAGCAACTAACCGACCAGAA GCATTGGATCCAGCCTTATGTCGCCCGGGTCGTTTCTCAAGAAAAGTATATGTAGGGGAACCAGATGAAGAAGGGAGGAG AAAGATATTAGCAGTACATCTAAGGGGAGTTCCTTTAGAGGAGAACGCTAACATCATTTGTCATTTAGTTGGTTCTCTTA CTGCTGGCTTGGTAGGTGCTGATCTGGCAAACATTGTCAATGAAGCTGCTTTGCTTGCTGCTCGTAGAGGTAGTGAAACT GTGGCTAGGGAAGACATAATGGAAGCGATTGAAAGAGCAAAGTTCGGAATCAATGATAAGCAATTGAGGTCTAGTAAAAT AGGCAAGGAGCTAAGTAAGCTATTCCCTTGGATGCCGTCATTGATGGGAAGAGGTGATAGGAGACAGGATGACCTGCAAG GACCATTAGGTTATCAATCACTGAATTCATGA
Protein sequence (LotjaGi2g1v0059700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFLSLPCSTGSFVTPDMLKIRYFGVDGNFCTRSFAWKQKLEFCERKSRIPSFRFPCCFKSQHGVSSNNKIEPLVSRTRG DGKAQSGKGESNRLKNRFSLRLRPRLRLLAMRMKRTSIESILNEVGIFVRRNIRTVAFSTSFSLVFGLCFMFLKLTALPP QKIVPYSELVTSLQNGSVAKVLVEEGSRRIYYNMNSETVENDQVSGEESQGADVSIDKDINQVGSEDTLRAGQTPVVNKL NKFSRTRSSIPQWQYSTRKIEHDEKFLISLMREKGVTYSSAPQSVLMSMRSTLITVITLWIPLIPLMWLLYRQLSAANSP ARKQKPNSQTVGFDDVQGVDSAKVELMEIVSCLQGDINYQKVGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFTVSA SEFVELFVGRGAARIRDLFNTARKFAPSIIFIDELDAVGGRRGRSFNDERDQTLNQLLTEMDGFASEMRVVVIAATNRPE ALDPALCRPGRFSRKVYVGEPDEEGRRKILAVHLRGVPLEENANIICHLVGSLTAGLVGADLANIVNEAALLAARRGSET VAREDIMEAIERAKFGINDKQLRSSKIGKELSKLFPWMPSLMGRGDRRQDDLQGPLGYQSLNS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 135 | 135 | - | – | |
| PANTHER | 74 | 607 | 534 | 2.8E-228 | – | |
| PANTHER | 74 | 607 | 534 | 2.8E-228 | – | |
| Phobius | 136 | 153 | 18 | - | – | |
| Pfam | 144 | 283 | 140 | 3.1E-11 | ||
| Phobius | 154 | 292 | 139 | - | – | |
| Phobius | 293 | 311 | 19 | - | – | |
| Phobius | 312 | 623 | 312 | - | – | |
| Gene3D | 320 | 501 | 182 | 3.1E-62 | – | |
| SUPERFAMILY | 331 | 572 | 242 | 1.07E-62 | ||
| SMART | 366 | 502 | 137 | 3.6E-21 | ||
| CDD | 367 | 500 | 134 | 5.79466E-27 | – | |
| Pfam | 370 | 499 | 130 | 3.3E-43 | ||
| ProSitePatterns | 470 | 488 | 19 | - | ||
| Gene3D | 502 | 580 | 79 | 5.2E-22 | – | |
| Pfam | 532 | 568 | 37 | 8.7E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metalloendopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi2g1v0059700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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