Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0217200 |
| Transcript ID | LotjaGi2g1v0217200.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein; TAIR: AT3G24530.1 AAA-type ATPase family protein / ankyrin repeat family protein; Swiss-Prot: sp|O22034|CFXQ2_CYACA Protein CfxQ homolog; TrEMBL-Plants: tr|I1KIQ6|I1KIQ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0217200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:67168129..67172656) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGAGGGAGGAAGAGGATGAGAATAGGTGAGAAATGAAAGAAAATGAAGGAGGAAAAAGATTGAGGAGGCGCAAGAGT AGGAACCGCAGAATGCTCAATACCAAAAACTCAAGGCGCATATTTAGCTGAATAAACAAAAAAAACACACAACACTCTCT TTCTCTTTCTCTTTCTCTTTTTCTCTCTTGTTTCTCTCACCACTCTTCTTCAATCTTGGACCACTCTCTTCTTCCTTCCT TCCCTGTGTCCTGTCCTGTCATTCCATCTTCTTCCTTGGAATTCAGCATGAACAGGACTCAGGATCAAAGGTCAAGGCCT GCTAAGCCCGCCACCATTCATGCCTATGCTCTTTCTGGGGACCTTGTTGGACTCCAGAGGCTACTTCGGGATAACCCTTC TCTTCTCAATGAGAGAAACCCTGTTGTAAGATCTCTACTTTTCTTCATTTTGATCAATTGGGTATCTTCAAAAAATGATC TTTTTTGTTGTTGATGGTGTATGTTCTTCATTGAGTTTAAAAGTTAGATCTTTATTGTGTTCTGTGTGGAAAAGTTCATG CTTTTGTTAATGGGTTGGTGTTGGTTTTGAATCATCTGGATTCATGTGGTTAATGTTCAGATCTACTTGGTAGTGACTCT TGGATTAATCAACCTGGTGTAGTTTGTCTCCTTGGTTAATATTATGATAGGTTTGTAGATACAAGTGATGCATGTTTTAT CTTATGAAAGACCAGACATGGTAGGGTGGTAGGAGAAGATAGCAAACTTTAGATTACCTTGATTGCTAGCCTTGCTAATT CCTCATTCTTAGCTATCCTAGTACTTTTTCCTTTCAATATGAGAGAAATGTGATAGATGCATAGTGCCTTGGGTGTGGAA TAGCCTGGAAAATGGCAACAATGGAGATTGCTCTGGATGGTGCAGATTATTGGCAGATGGAAGTTGCTTGTAGAAGAGGA ATTTAGTGGATTTTCAAAGGGAAAATTTTAAAATTTTCAAGGGAAATGGGGAAAGGATTATTTTTATGGCTTCTCTTAGC TGATATTTTTTTGGGTTTTGGGGTTTATGTGAAGGGTTTGGAGGGCATCATAGAATTGATGATCTGTTTCTCCTAGTGCT TCCTTTTGGGTTTCTAGTAATAAGGTTTTAAAAAGGTGTCTATATCCTGGCATATTAATTTCTTACTTTACAGGTTTCCA TATGATTCATGTTAAATTTTATTTACATTGTATGGCTGAGATCTAATTTTTTTTTTCAAATACAGATGGCACAGACACCA CTTCATGTTTCTGCCGGTCACAATAGGGCTGACATAGTTAAGTTTCTTCTTGATTGGCAAGGACCAGATAAGGTTGAGAT GGAGGCCAAGAATATGGTAGGCACTTACAATTTTTTTACTGAAGTTGTTGCTAGAATTGTAGAATGTAAATGTGTATGAT CTGGACTTCCAGGAACTGTCTTGTGATTCTAAATGATTTTTTGTATTCCTATTACAGTATGGAGAAACTCCTTTGCACAT GGCAGCAAAAAATGGATGTAGTGATACTGCACGGTTACTTCTTGCTCATGGTGCTGTTGTTGAAGCAAGAGCAAATGTAA TTTTTTTAAATGAGTTTTCATCTGTCATTTAATCTTATTTAAAACCTGGCAATAATTATTTTTATAATTCATCTCATATG AAAGTTTGTTCCTACCTTTTCTTGCAGAATGGTATGACACCTTTACACCTTGCTGTGTGGTACTCGCTACGAGCAGAAGA AGATATCTCGGCAGTGAAAACATTGCTCGAATACAATGCTGATTGCAGTGCTAAGGATGATGTAATCAATTTTAAACCTT CTTTTTGTGCTCAAATGGCTGAAATCATAATACTTACTCAAACCTATGAATTGCAGGAGGGGATGACTCCTTTAAATCAT CTTTCCCAAGGCCCTGGAACTGAGAAGCTCAGGGAATTATTACACTGGCATCTTGATGAGCAGAGGAAGAAACGAGCCAT TAAAGCCTGCAGTGAAACAAAATCTAAAATGGATGAGCTCGAAAAGGAACTAACTAACATTGTGGGTCTTAATGATCTAA AAGTACAGCTACGCAAGTGGGCAAAGGGCATGCTTTTGGATGAGAGGCGCAGAGCTCTTGGTCTGCATGTTGGCACAAGA AGACCCCCTCACATGGCCTTTCTTGGAAATCCTGGAACAGGTTATTGGTGACAGATTGTTTTTGGAATATCATGCTCGTA TTGTCTGTGATCAGTATTGGAAAATTTGCTTATCCTGCTCTTAATTTTAGTTTTTCCCATTTACCATTCCATGCTATAAA AATTTATTTTTGTGTTCTTTTTGAACTCTCATTTTCTATTGGGAGCCACTGGCTCAGCCTTCCCTTTGTATGTAGACTTT TGCATGACTACTCACTAATTGGTACAGAGGAATGGTGTTTAGATCTGAAGTTAATTTATTCACGGATCATTGAGTTTTCA TGGAGTCTATTTCCTTTGGCTCTTCACATTTACTAATGCCATGATTTTTAGCTGCTCTTTGCCTTTCTGATCGGTTGGTT CCTCCACTAATGCAGCATCACAAGCTAAGCATTTCACTTGGTTTAGATTGATGAAAATGAGCATTACTGCATGCCTGATG ACACTGATATATCTTTGTTTATATAAAAAATTGAATGCAACAGCAGCTACATCAGTCTTGTGTGCTTTCTTTTTGTCATG TCAACTCCTATTTAGGTCTTTTGCTTAATGCAGCATTACAAGCTAAGCATTTCACTTGGTTTAGATTGATGAAAATGTGC ATTATTGCATGCCTGATGACACTGATATATCTTTGTTTATATAAACAATTGAATGCAACAGCAGCTACATCAGTCTTGTG TGCTTTCTTTTTGTCATGTCAACTCCTATTTAGGTCTTTTGCTTATTTTTGGTGCCTTTTTCTTTATGGATCTGTACTTT CCGTAAGTTAACTTCTGTATTTAATAGGTAAAACTATGGTAGCAAGGATCCTTGGAAGATTACTCCACATGGTGGGAATT CTACCTACTGATAACGTGACAGAAGTGCAGCGAACTGATTTAGTTGGTGAATTTGTTGGTCACACTGGTCCTAAAACCAG GCGAAAGGTATGTTATCAGCTTCGAAATTCTTCATCTCTTAAGTCTGTTTTGGCTTTTAGAAACCAGATTTGTCTGTGTT GTTTAACAATTGAGTTCAAACTTCAAACATTGTATACAGATCAAGGAAGCAGAGGGGGGGATTCTTTTCGTCGATGAAGC TTATAGACTGATACCGATGCAGAAGAGTGATGATAAGGACTACGGGTTGGAAGCCTTAGAGGAGATTATGTCTATCATGG ACAGTGGAAAAATTGTTGTAATATTTGCTGGGTACAGTGAACCAATGAAACGAGTAATTGCTTCTAATGAAGGTTTCTGT AGAAGGGTCACCAAGTTTTTCCAATTTAATGATTTCAATTCAGAAGAACTTGCACAAATCCTTCACATCAAGATGAGTAA CTTAGCAAAAGATAGTTTGCTCTATGGATTTAGGTTGCATCCCTCTTGCAACCTAAAAGCTATAGCAGAATTGATAGAAA GGGAAACAACAGAGAAGCAGCGTAAGGAGACAAATGGCGGTTTGATAGATACCATGTTGGTTAATGCCAGGGAAAATTTG GATTTGAGGCTTAGCTTTGAGTGCATAGATACAGAAGAACTTCTTACCATCACACTGGAAGATTTAGAAGCAGGTCTTCA CCTACTATCACATTAATCATTCTTTTAGAATGTTCGGATTAGCTTCTATTTTCTTAGAATCAATTCTGGCAGCTAGAAGC TTACTCACAGAAGCTTCTCCCCATAATTGATTATGGATTTAGAATTAATTATAGAAATATTTCCGAACATGCACATAGGC AATTAGATGTTTGGAGAGGTTCGTGTTTGCTTACCTCAATATTCATCATTGGCTATATTGCAAGTTTGCAATTGCTCATT GAAGAGCTTGTCATGAATAAGTTTGCCATAGAAGGTGGATCATTTTTTGGGAAGCTTTTTCTTTTCTCCCTGTAATTGAT AATGTTATATAGGCTCCATTGGCTCCATTGATGCAGCACTTTGCTTTATTTTTCTATGTGTATACATTGGCTCCATAGGC TCCATTGGTTTCATTGTGTATTCTTTGTATGTTATTCATTATTGTAGGACAGTAATACATCCCCTCTCTAGTTTGTGGCT GTCCAGAAATTTTCCATTAATATTAAATATTGAAGTTTTGTAAATTGGTGATAATTTCCTTTTGTTGCACACGTATGTAT GATGCTGAATGGCTGTTGGATTTTATTTTTTGATGAAAGGATTTATCAAGTTTTTGGTATTTAAAAATTTGAGTAAATTT GTGTTGAAGGGGAAAAAAGATAATGAAGACGTGGAGGGCCAGAACACTCTTTTGAACACACTTCCACACGCTTAGGGGTG GAAATAGGTCAGGCGGCTAGTCAGGGGCCTATGGCTCGGCTCGTCTGA
CDS sequence (LotjaGi2g1v0217200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACAGGACTCAGGATCAAAGGTCAAGGCCTGCTAAGCCCGCCACCATTCATGCCTATGCTCTTTCTGGGGACCTTGT TGGACTCCAGAGGCTACTTCGGGATAACCCTTCTCTTCTCAATGAGAGAAACCCTGTTATGGCACAGACACCACTTCATG TTTCTGCCGGTCACAATAGGGCTGACATAGTTAAGTTTCTTCTTGATTGGCAAGGACCAGATAAGGTTGAGATGGAGGCC AAGAATATGTATGGAGAAACTCCTTTGCACATGGCAGCAAAAAATGGATGTAGTGATACTGCACGGTTACTTCTTGCTCA TGGTGCTGTTGTTGAAGCAAGAGCAAATAATGGTATGACACCTTTACACCTTGCTGTGTGGTACTCGCTACGAGCAGAAG AAGATATCTCGGCAGTGAAAACATTGCTCGAATACAATGCTGATTGCAGTGCTAAGGATGATGAGGGGATGACTCCTTTA AATCATCTTTCCCAAGGCCCTGGAACTGAGAAGCTCAGGGAATTATTACACTGGCATCTTGATGAGCAGAGGAAGAAACG AGCCATTAAAGCCTGCAGTGAAACAAAATCTAAAATGGATGAGCTCGAAAAGGAACTAACTAACATTGTGGGTCTTAATG ATCTAAAAGTACAGCTACGCAAGTGGGCAAAGGGCATGCTTTTGGATGAGAGGCGCAGAGCTCTTGGTCTGCATGTTGGC ACAAGAAGACCCCCTCACATGGCCTTTCTTGGAAATCCTGGAACAGGTAAAACTATGGTAGCAAGGATCCTTGGAAGATT ACTCCACATGGTGGGAATTCTACCTACTGATAACGTGACAGAAGTGCAGCGAACTGATTTAGTTGGTGAATTTGTTGGTC ACACTGGTCCTAAAACCAGGCGAAAGATCAAGGAAGCAGAGGGGGGGATTCTTTTCGTCGATGAAGCTTATAGACTGATA CCGATGCAGAAGAGTGATGATAAGGACTACGGGTTGGAAGCCTTAGAGGAGATTATGTCTATCATGGACAGTGGAAAAAT TGTTGTAATATTTGCTGGGTACAGTGAACCAATGAAACGAGTAATTGCTTCTAATGAAGGTTTCTGTAGAAGGGTCACCA AGTTTTTCCAATTTAATGATTTCAATTCAGAAGAACTTGCACAAATCCTTCACATCAAGATGAGTAACTTAGCAAAAGAT AGTTTGCTCTATGGATTTAGGTTGCATCCCTCTTGCAACCTAAAAGCTATAGCAGAATTGATAGAAAGGGAAACAACAGA GAAGCAGCGTAAGGAGACAAATGGCGGTTTGATAGATACCATGTTGGTTAATGCCAGGGAAAATTTGGATTTGAGGCTTA GCTTTGAGTGCATAGATACAGAAGAACTTCTTACCATCACACTGGAAGATTTAGAAGCAGGTCTTCACCTACTATCACAT TAA
Protein sequence (LotjaGi2g1v0217200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNRTQDQRSRPAKPATIHAYALSGDLVGLQRLLRDNPSLLNERNPVMAQTPLHVSAGHNRADIVKFLLDWQGPDKVEMEA KNMYGETPLHMAAKNGCSDTARLLLAHGAVVEARANNGMTPLHLAVWYSLRAEEDISAVKTLLEYNADCSAKDDEGMTPL NHLSQGPGTEKLRELLHWHLDEQRKKRAIKACSETKSKMDELEKELTNIVGLNDLKVQLRKWAKGMLLDERRRALGLHVG TRRPPHMAFLGNPGTGKTMVARILGRLLHMVGILPTDNVTEVQRTDLVGEFVGHTGPKTRRKIKEAEGGILFVDEAYRLI PMQKSDDKDYGLEALEEIMSIMDSGKIVVIFAGYSEPMKRVIASNEGFCRRVTKFFQFNDFNSEELAQILHIKMSNLAKD SLLYGFRLHPSCNLKAIAELIERETTEKQRKETNGGLIDTMLVNARENLDLRLSFECIDTEELLTITLEDLEAGLHLLSH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 479 | 479 | 3.3E-275 | – | |
| PANTHER | 1 | 479 | 479 | 3.3E-275 | – | |
| Gene3D | 11 | 178 | 168 | 5.5E-34 | ||
| ProSiteProfiles | 12 | 187 | 176 | 29.972 | ||
| SUPERFAMILY | 17 | 177 | 161 | 1.49E-30 | ||
| SMART | 47 | 78 | 32 | 190.0 | ||
| Pfam | 82 | 153 | 72 | 7.6E-13 | ||
| SMART | 84 | 113 | 30 | 3.9E-5 | ||
| ProSiteProfiles | 84 | 116 | 33 | 12.93 | ||
| PRINTS | 85 | 100 | 16 | 2.0E-5 | ||
| SMART | 117 | 151 | 35 | 0.0012 | ||
| ProSiteProfiles | 117 | 154 | 38 | 10.846 | ||
| PRINTS | 138 | 152 | 15 | 2.0E-5 | ||
| Gene3D | 180 | 379 | 200 | 3.8E-45 | – | |
| Coils | 185 | 205 | 21 | - | – | |
| SUPERFAMILY | 203 | 469 | 267 | 5.09E-31 | ||
| PRINTS | 205 | 219 | 15 | 5.8E-36 | ||
| CDD | 229 | 352 | 124 | 1.56269E-10 | – | |
| SMART | 243 | 376 | 134 | 1.9E-5 | ||
| PRINTS | 246 | 261 | 16 | 5.8E-36 | ||
| Pfam | 247 | 362 | 116 | 9.2E-13 | ||
| PRINTS | 284 | 298 | 15 | 5.8E-36 | ||
| PRINTS | 298 | 317 | 20 | 5.8E-36 | ||
| PRINTS | 350 | 367 | 18 | 5.8E-36 | ||
| PRINTS | 367 | 386 | 20 | 5.8E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi2g1v0217200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…