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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0217200 |
| Transcript ID | LotjaGi2g1v0217200.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein; TAIR: AT3G24530.2 AAA-type ATPase family protein / ankyrin repeat family protein; Swiss-Prot: sp|O22034|CFXQ2_CYACA Protein CfxQ homolog; TrEMBL-Plants: tr|V7C640|V7C640_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0217200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:67168881..67171391) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCACAGACACCACTTCATGTTTCTGCCGGTCACAATAGGGCTGACATAGTTAAGTTTCTTCTTGATTGGCAAGGACC AGATAAGGTTGAGATGGAGGCCAAGAATATGGTAGGCACTTACAATTTTTTTACTGAAGTTGTTGCTAGAATTGTAGAAT GTAAATGTGTATGATCTGGACTTCCAGGAACTGTCTTGTGATTCTAAATGATTTTTTGTATTCCTATTACAGTATGGAGA AACTCCTTTGCACATGGCAGCAAAAAATGGATGTAGTGATACTGCACGGTTACTTCTTGCTCATGGTGCTGTTGTTGAAG CAAGAGCAAATGTAATTTTTTTAAATGAGTTTTCATCTGTCATTTAATCTTATTTAAAACCTGGCAATAATTATTTTTAT AATTCATCTCATATGAAAGTTTGTTCCTACCTTTTCTTGCAGAATGGTATGACACCTTTACACCTTGCTGTGTGGTACTC GCTACGAGCAGAAGAAGATATCTCGGCAGTGAAAACATTGCTCGAATACAATGCTGATTGCAGTGCTAAGGATGATGTAA TCAATTTTAAACCTTCTTTTTGTGCTCAAATGGCTGAAATCATAATACTTACTCAAACCTATGAATTGCAGGAGGGGATG ACTCCTTTAAATCATCTTTCCCAAGGCCCTGGAACTGAGAAGCTCAGGGAATTATTACACTGGCATCTTGATGAGCAGAG GAAGAAACGAGCCATTAAAGCCTGCAGTGAAACAAAATCTAAAATGGATGAGCTCGAAAAGGAACTAACTAACATTGTGG GTCTTAATGATCTAAAAGTACAGCTACGCAAGTGGGCAAAGGGCATGCTTTTGGATGAGAGGCGCAGAGCTCTTGGTCTG CATGTTGGCACAAGAAGACCCCCTCACATGGCCTTTCTTGGAAATCCTGGAACAGGTTATTGGTGACAGATTGTTTTTGG AATATCATGCTCGTATTGTCTGTGATCAGTATTGGAAAATTTGCTTATCCTGCTCTTAATTTTAGTTTTTCCCATTTACC ATTCCATGCTATAAAAATTTATTTTTGTGTTCTTTTTGAACTCTCATTTTCTATTGGGAGCCACTGGCTCAGCCTTCCCT TTGTATGTAGACTTTTGCATGACTACTCACTAATTGGTACAGAGGAATGGTGTTTAGATCTGAAGTTAATTTATTCACGG ATCATTGAGTTTTCATGGAGTCTATTTCCTTTGGCTCTTCACATTTACTAATGCCATGATTTTTAGCTGCTCTTTGCCTT TCTGATCGGTTGGTTCCTCCACTAATGCAGCATCACAAGCTAAGCATTTCACTTGGTTTAGATTGATGAAAATGAGCATT ACTGCATGCCTGATGACACTGATATATCTTTGTTTATATAAAAAATTGAATGCAACAGCAGCTACATCAGTCTTGTGTGC TTTCTTTTTGTCATGTCAACTCCTATTTAGGTCTTTTGCTTAATGCAGCATTACAAGCTAAGCATTTCACTTGGTTTAGA TTGATGAAAATGTGCATTATTGCATGCCTGATGACACTGATATATCTTTGTTTATATAAACAATTGAATGCAACAGCAGC TACATCAGTCTTGTGTGCTTTCTTTTTGTCATGTCAACTCCTATTTAGGTCTTTTGCTTATTTTTGGTGCCTTTTTCTTT ATGGATCTGTACTTTCCGTAAGTTAACTTCTGTATTTAATAGGTAAAACTATGGTAGCAAGGATCCTTGGAAGATTACTC CACATGGTGGGAATTCTACCTACTGATAACGTGACAGAAGTGCAGCGAACTGATTTAGTTGGTGAATTTGTTGGTCACAC TGGTCCTAAAACCAGGCGAAAGGTATGTTATCAGCTTCGAAATTCTTCATCTCTTAAGTCTGTTTTGGCTTTTAGAAACC AGATTTGTCTGTGTTGTTTAACAATTGAGTTCAAACTTCAAACATTGTATACAGATCAAGGAAGCAGAGGGGGGGATTCT TTTCGTCGATGAAGCTTATAGACTGATACCGATGCAGAAGAGTGATGATAAGGACTACGGGTTGGAAGCCTTAGAGGAGA TTATGTCTATCATGGACAGTGGAAAAATTGTTGTAATATTTGCTGGGTACAGTGAACCAATGAAACGAGTAATTGCTTCT AATGAAGGTTTCTGTAGAAGGGTCACCAAGTTTTTCCAATTTAATGATTTCAATTCAGAAGAACTTGCACAAATCCTTCA CATCAAGATGAGTAACTTAGCAAAAGATAGTTTGCTCTATGGATTTAGGTTGCATCCCTCTTGCAACCTAAAAGCTATAG CAGAATTGATAGAAAGGGAAACAACAGAGAAGCAGCGTAAGGAGACAAATGGCGGTTTGATAGATACCATGTTGGTTAAT GCCAGGGAAAATTTGGATTTGAGGCTTAGCTTTGAGTGCATAGATACAGAAGAACTTCTTACCATCACACTGGAAGATTT AGAAGCAGGTCTTCACCTACTATCACATTAA
CDS sequence (LotjaGi2g1v0217200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACAGACACCACTTCATGTTTCTGCCGGTCACAATAGGGCTGACATAGTTAAGTTTCTTCTTGATTGGCAAGGACC AGATAAGGTTGAGATGGAGGCCAAGAATATGTATGGAGAAACTCCTTTGCACATGGCAGCAAAAAATGGATGTAGTGATA CTGCACGGTTACTTCTTGCTCATGGTGCTGTTGTTGAAGCAAGAGCAAATAATGGTATGACACCTTTACACCTTGCTGTG TGGTACTCGCTACGAGCAGAAGAAGATATCTCGGCAGTGAAAACATTGCTCGAATACAATGCTGATTGCAGTGCTAAGGA TGATGAGGGGATGACTCCTTTAAATCATCTTTCCCAAGGCCCTGGAACTGAGAAGCTCAGGGAATTATTACACTGGCATC TTGATGAGCAGAGGAAGAAACGAGCCATTAAAGCCTGCAGTGAAACAAAATCTAAAATGGATGAGCTCGAAAAGGAACTA ACTAACATTGTGGGTCTTAATGATCTAAAAGTACAGCTACGCAAGTGGGCAAAGGGCATGCTTTTGGATGAGAGGCGCAG AGCTCTTGGTCTGCATGTTGGCACAAGAAGACCCCCTCACATGGCCTTTCTTGGAAATCCTGGAACAGGTAAAACTATGG TAGCAAGGATCCTTGGAAGATTACTCCACATGGTGGGAATTCTACCTACTGATAACGTGACAGAAGTGCAGCGAACTGAT TTAGTTGGTGAATTTGTTGGTCACACTGGTCCTAAAACCAGGCGAAAGATCAAGGAAGCAGAGGGGGGGATTCTTTTCGT CGATGAAGCTTATAGACTGATACCGATGCAGAAGAGTGATGATAAGGACTACGGGTTGGAAGCCTTAGAGGAGATTATGT CTATCATGGACAGTGGAAAAATTGTTGTAATATTTGCTGGGTACAGTGAACCAATGAAACGAGTAATTGCTTCTAATGAA GGTTTCTGTAGAAGGGTCACCAAGTTTTTCCAATTTAATGATTTCAATTCAGAAGAACTTGCACAAATCCTTCACATCAA GATGAGTAACTTAGCAAAAGATAGTTTGCTCTATGGATTTAGGTTGCATCCCTCTTGCAACCTAAAAGCTATAGCAGAAT TGATAGAAAGGGAAACAACAGAGAAGCAGCGTAAGGAGACAAATGGCGGTTTGATAGATACCATGTTGGTTAATGCCAGG GAAAATTTGGATTTGAGGCTTAGCTTTGAGTGCATAGATACAGAAGAACTTCTTACCATCACACTGGAAGATTTAGAAGC AGGTCTTCACCTACTATCACATTAA
Protein sequence (LotjaGi2g1v0217200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQTPLHVSAGHNRADIVKFLLDWQGPDKVEMEAKNMYGETPLHMAAKNGCSDTARLLLAHGAVVEARANNGMTPLHLAV WYSLRAEEDISAVKTLLEYNADCSAKDDEGMTPLNHLSQGPGTEKLRELLHWHLDEQRKKRAIKACSETKSKMDELEKEL TNIVGLNDLKVQLRKWAKGMLLDERRRALGLHVGTRRPPHMAFLGNPGTGKTMVARILGRLLHMVGILPTDNVTEVQRTD LVGEFVGHTGPKTRRKIKEAEGGILFVDEAYRLIPMQKSDDKDYGLEALEEIMSIMDSGKIVVIFAGYSEPMKRVIASNE GFCRRVTKFFQFNDFNSEELAQILHIKMSNLAKDSLLYGFRLHPSCNLKAIAELIERETTEKQRKETNGGLIDTMLVNAR ENLDLRLSFECIDTEELLTITLEDLEAGLHLLSH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 433 | 433 | 1.0E-255 | – | |
| ProSiteProfiles | 1 | 141 | 141 | 29.017 | ||
| SMART | 1 | 32 | 32 | 190.0 | ||
| PANTHER | 1 | 433 | 433 | 1.0E-255 | – | |
| Gene3D | 1 | 132 | 132 | 3.6E-32 | ||
| SUPERFAMILY | 3 | 135 | 133 | 7.62E-29 | ||
| Pfam | 6 | 107 | 102 | 3.3E-16 | ||
| SMART | 38 | 67 | 30 | 3.9E-5 | ||
| ProSiteProfiles | 38 | 70 | 33 | 12.93 | ||
| PRINTS | 39 | 54 | 16 | 1.7E-5 | ||
| ProSiteProfiles | 71 | 108 | 38 | 10.846 | ||
| SMART | 71 | 105 | 35 | 0.0012 | ||
| PRINTS | 92 | 106 | 15 | 1.7E-5 | ||
| Gene3D | 134 | 333 | 200 | 3.0E-45 | – | |
| Coils | 139 | 159 | 21 | - | – | |
| SUPERFAMILY | 157 | 423 | 267 | 3.87E-31 | ||
| PRINTS | 159 | 173 | 15 | 3.4E-36 | ||
| CDD | 183 | 306 | 124 | 1.59226E-10 | – | |
| SMART | 197 | 330 | 134 | 1.9E-5 | ||
| PRINTS | 200 | 215 | 16 | 3.4E-36 | ||
| Pfam | 201 | 316 | 116 | 7.6E-13 | ||
| PRINTS | 238 | 252 | 15 | 3.4E-36 | ||
| PRINTS | 252 | 271 | 20 | 3.4E-36 | ||
| PRINTS | 304 | 321 | 18 | 3.4E-36 | ||
| PRINTS | 321 | 340 | 20 | 3.4E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi2g1v0217200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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