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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0271600 |
| Transcript ID | LotjaGi2g1v0271600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT2G34930.1 disease resistance family protein / LRR family protein; Swiss-Prot: sp|Q9C9H7|RLP12_ARATH Receptor-like protein 12; TrEMBL-Plants: tr|A0A072U7R0|A0A072U7R0_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi2g1v0271600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:74231031..74234899) extracted from Lotus japonicus Gifu genome v1.2.
AGTTGATTGACTTGAGCGTAAACCATTCAACACCAAAATCCTGAATTAATTTTGACTGTGAGCAGCAGCCACACAAGTTT GCATTTTACATGGACTGAGAGCAGCAGCCATACCTGTCTCTCTGCCTATAAAGCTAGCTAGCTAGATTACACTTCATTCA CACATTAATTCCTCACTTTGAAATTATATCCAAAACATTTTCCAAAGGTGGTTGAGCTCATCATCATCTCATTCTCACCA TGTTTGGGTGCAGGTTCAGTCTGTTTTGTGTGGTGGCCATTCTATTCATCTGTTTCTTTGTTCAAAGTTCGCATACAAAT AAGTGCAAGGAGACAGAGAGGCAATCTCTTCTGAGGTTCAAAGGTGGTGCCACTAATGTAAGGAAACTTCTTTCCTCATG GAAAGGTGAAGATTGTTGCAAGTGGAAAGGAATTTCATGTGACAATTTAACTGGCCATGTAACCAGTTTGGATCTCGATT TTCAATTCATGGGCGGTAAGTTAGATTCTTCAATATGTGAACTGAAACATCTAACTTCCTTAGATCTCGGTTTTAATAGC TTAGCAGGAAAGATCCCAAAGTGCATTGGTAACCTTTCCAATTTGCAAACTCTAGTCCTTGGAGAAAATTATTTGGTTGC TGATGATCTTGATTGGGTTTCTCACCTTTCTAGTTTGAGTTTCCTTGGTATGTCATCTGTGAATCTTAGTCAAGCTGTTG ATTGGCTATCATCAATAAGCAAAGTCCCTTCTCTATCAATACTTTCATTATCTGACTGCCAGCTCCCTCCAATCAATCCT GAATCTACCCTCCATTTGAATTCTTCCACCTCTCTCGAGGTGCTCTACCTTTCAGAAAATTATTTAAACTCTTTAACTCT GGCATCAGTGCTTAATGTTAGCAGATTCCTCACAGCTCTTTATCTCCCTTATAATGAAATTGAGGGTAGCTTACCAGAAT CCTTTCTGAGTTTGTGTCAACTTAAATATTTAGATTTGCGGTCCAACAAATTATCTGGCCAACTCAGTAACAACTTGAAT CAATTACGTTGTTCACAAAATGGTCACTTGCCTTATCTTTATCATTTGGATCTCAGTATTAACAAATTGAGCGGTTCATT GTCATCATTTGATGTTACTGAACTTGCCTCATTAGAATATTTGGATCTCTCGAGAAATCAACTGAGCGGTTCACTACCAC ATGGTATTGGCCAACTCTCGAATCTCACGAGCTTAAGTATCTATTCAAATAAGTTGAGCGGTGTCATCAGTGAAACACAT CTATCAAATCTATATGGATTGACAGAGCTGCTGGTGTTTCAAAATTCACTTTCATTCAACTTGAGTTCAAAATGGATTCC GCCTTTCCAACTAGAGAGATTCTTTGCATCATCATGCAATTTGGGTCCTACATTCCCAACATGGCTCAAACATCAAAAAA GACTTTATGAGTTGGACATCTCTAATAGTGGTATTTCAGATTCAATTCCTGAATGGTTCTGGGACATGTTTCAAAGTCCA TATGCTGTGGATGTTTCGCATAACCAACTTAGTGGACCTTTGCCACAAAATTTGACAAGAATATTGTCAAGGCTGGATAC ATTTGATTTTAGTTTCAACAACTTCTCCGGTCCACTGCCTTATTTTCCACAAATAAGTGGTATATTTCTCTCAAATAATA GGTTCAATGGGTCTCTATCTTCTTTTTGTGCATCTCCACCACAAGAATTACATTATCTTGATCTGTCTAGTAACTTACTA GAAGGCTCACTTTTGGATTGTTGGGGGAAGTTCAAAAATTTAGTATATCTCAATTTGGCTGAAAATAAATTAACCGGAAG AATACCCAAGTATTTTGGCACTCTAGAACAAATGGTGTCAATGCATTTAAATAACAATAACTTCTACGGTGAAATTCCAT CCTTGACCCTTTGTACAAGCTTGATTCTCTTGGATTTAGGGCATAACAATCTCCAAGGAACATTACCAGCATGGGTAGGC CATCACCTGCCTCAGTTGATTGTTTTGAGTCTTCGGGAAAATAAGTTCCAAGGAAAAATACCTGAAAGTCTGTGTGATCT ATCATTTCTTCAAGTTTTAGATCTTTCTTGGAATAATATTTCAGGGGAAATACCACAATGCCTCAATCACATAATTGCTT TGTCAAATATTACATTTCCAAGAAAGTCCATTTCCTATGGCCGATATTATGATCATCTTAATATTAAAGTTCATATTGGC TCATTTGATGATAAAGCAATCTTGTCATGGAAAGGGGCAAAAAGAGAGTATGGAAAAAATGTTGGGCTCGTGACTACCAT TGATTTTTCTTGCAACCACTTGACAGGTGAGATACCACAAAGTATAACAAAACTTGTGGCATTAGCTAGCTTAAATCTTT CAAGTAATGATCTCACGGGATCCATTCCCAACAACATTGGTCAAATGGAAAGATTGGAGTCACTTGACTTATCAAGAAAC CATCTCGGTGGTAGAATGCCTACAAGTTTTTCGAATTTGAGCTTTCTAAGCTACATGAACTTATCCTTCAACAACTTATA TGGGGAAATTCCAATAGGCACTCAACTGCAATCTTTTAATGCCTCTTCATATATTGGGAACAAGGGGCTTTGTGGCCCAC CACTCTCAAACAGTTGCTCAGGGGATGTTATATCACCGAGTGTAAGCTCTGATGAAGATAAGATCATAACTTTTGGGTTT TACATCGCCCTGGTGCTTGGGTTTTTCGTTGGATTTTGGGGAGTTTGTGGAACTTTAGTCATAAAAGCTTCTTGGAGACA TGCCTATTTCCAATTCTTCAATGACATGAATGACTGGATGCACGTGACAATAATGGTTTTTTCAAGAAGAATGAAAAGAA GATTTCGAGTCCAAGCCTAACAGGTAAATAAAGTTTTAATGCCTCCTAGTTATTTTATAATATAGGAATGATTCATTGCT TATTATGCACAAAAGAGTATTATTATTGCACGCATTTAAATCCAGTTGAGATGATGTGTTTTATTCCCAATATTTGGCAG GTCACGCTTCATGTGTTCCTTGATATGATAGAGACATCGTTCTTGTGCGGGTGGTCTTCTGCTTTGCCTTCTTTTCTCTA AAACTTTCTGAAAGTTTCCACTTAATATATTATAGTGCTATCTTGGTGTAATTTTCAAGTTTCTTCTAAACTACATTCTA TCATACTGTGTTGTTTAGCTTCTTATAGTCAATTATATATGTATCATAAAAAAAATAAGAATGTGCAAGACTATATTATT TTCTTTTATTTTGAATTTCTGATTTCTAATTTCTAATTTAGTATGCTAAATCACATTCTTTTATTAGATTACATTGCACT ATTAATTGATGAGAATTTATATAACTTTTCAACTACCAAATACTTTTCAACCAGCAGTGAAGCAGGTTTATTTCAAGAGC TAGGGATAGCCAGAAATAGAATCCAATCCCTCCTGAGAAGCTCAGAGGTATGGTCAGGACGTCACTCTCCTCTGCTTGAT ATGGAGGGGGTGAATTGCTGAGTAATTCCACAGTCAGCCAGCCTATGGTATCTGACTCACGCCTCACCTAGCCGATTGTG AACACCATGTAGAATTGTAGCATGATCATGTGTATCCATTTGAGAGCTGAATCTGTCCTAGAAATATTAAAAATAGACCA TGTAATTAGAGGGGAGGTGTACTTAGTTGTGACTTGTGAGAGCTGAGTTCCAGAGGGCAGAGAGAAAAGACTGCTCTGAG TGTGGGTGAGGCCAGATATAGAGTTGAGTGATTATATTATGTGTAGATGTAATGAATATATGAGTTTCTCCTCCGTGGAT GTAGGCATTCAGGCCGAACCACATTAAAT
CDS sequence (LotjaGi2g1v0271600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGGGTGCAGGTTCAGTCTGTTTTGTGTGGTGGCCATTCTATTCATCTGTTTCTTTGTTCAAAGTTCGCATACAAA TAAGTGCAAGGAGACAGAGAGGCAATCTCTTCTGAGGTTCAAAGGTGGTGCCACTAATGTAAGGAAACTTCTTTCCTCAT GGAAAGGTGAAGATTGTTGCAAGTGGAAAGGAATTTCATGTGACAATTTAACTGGCCATGTAACCAGTTTGGATCTCGAT TTTCAATTCATGGGCGGTAAGTTAGATTCTTCAATATGTGAACTGAAACATCTAACTTCCTTAGATCTCGGTTTTAATAG CTTAGCAGGAAAGATCCCAAAGTGCATTGGTAACCTTTCCAATTTGCAAACTCTAGTCCTTGGAGAAAATTATTTGGTTG CTGATGATCTTGATTGGGTTTCTCACCTTTCTAGTTTGAGTTTCCTTGGTATGTCATCTGTGAATCTTAGTCAAGCTGTT GATTGGCTATCATCAATAAGCAAAGTCCCTTCTCTATCAATACTTTCATTATCTGACTGCCAGCTCCCTCCAATCAATCC TGAATCTACCCTCCATTTGAATTCTTCCACCTCTCTCGAGGTGCTCTACCTTTCAGAAAATTATTTAAACTCTTTAACTC TGGCATCAGTGCTTAATGTTAGCAGATTCCTCACAGCTCTTTATCTCCCTTATAATGAAATTGAGGGTAGCTTACCAGAA TCCTTTCTGAGTTTGTGTCAACTTAAATATTTAGATTTGCGGTCCAACAAATTATCTGGCCAACTCAGTAACAACTTGAA TCAATTACGTTGTTCACAAAATGGTCACTTGCCTTATCTTTATCATTTGGATCTCAGTATTAACAAATTGAGCGGTTCAT TGTCATCATTTGATGTTACTGAACTTGCCTCATTAGAATATTTGGATCTCTCGAGAAATCAACTGAGCGGTTCACTACCA CATGGTATTGGCCAACTCTCGAATCTCACGAGCTTAAGTATCTATTCAAATAAGTTGAGCGGTGTCATCAGTGAAACACA TCTATCAAATCTATATGGATTGACAGAGCTGCTGGTGTTTCAAAATTCACTTTCATTCAACTTGAGTTCAAAATGGATTC CGCCTTTCCAACTAGAGAGATTCTTTGCATCATCATGCAATTTGGGTCCTACATTCCCAACATGGCTCAAACATCAAAAA AGACTTTATGAGTTGGACATCTCTAATAGTGGTATTTCAGATTCAATTCCTGAATGGTTCTGGGACATGTTTCAAAGTCC ATATGCTGTGGATGTTTCGCATAACCAACTTAGTGGACCTTTGCCACAAAATTTGACAAGAATATTGTCAAGGCTGGATA CATTTGATTTTAGTTTCAACAACTTCTCCGGTCCACTGCCTTATTTTCCACAAATAAGTGGTATATTTCTCTCAAATAAT AGGTTCAATGGGTCTCTATCTTCTTTTTGTGCATCTCCACCACAAGAATTACATTATCTTGATCTGTCTAGTAACTTACT AGAAGGCTCACTTTTGGATTGTTGGGGGAAGTTCAAAAATTTAGTATATCTCAATTTGGCTGAAAATAAATTAACCGGAA GAATACCCAAGTATTTTGGCACTCTAGAACAAATGGTGTCAATGCATTTAAATAACAATAACTTCTACGGTGAAATTCCA TCCTTGACCCTTTGTACAAGCTTGATTCTCTTGGATTTAGGGCATAACAATCTCCAAGGAACATTACCAGCATGGGTAGG CCATCACCTGCCTCAGTTGATTGTTTTGAGTCTTCGGGAAAATAAGTTCCAAGGAAAAATACCTGAAAGTCTGTGTGATC TATCATTTCTTCAAGTTTTAGATCTTTCTTGGAATAATATTTCAGGGGAAATACCACAATGCCTCAATCACATAATTGCT TTGTCAAATATTACATTTCCAAGAAAGTCCATTTCCTATGGCCGATATTATGATCATCTTAATATTAAAGTTCATATTGG CTCATTTGATGATAAAGCAATCTTGTCATGGAAAGGGGCAAAAAGAGAGTATGGAAAAAATGTTGGGCTCGTGACTACCA TTGATTTTTCTTGCAACCACTTGACAGGTGAGATACCACAAAGTATAACAAAACTTGTGGCATTAGCTAGCTTAAATCTT TCAAGTAATGATCTCACGGGATCCATTCCCAACAACATTGGTCAAATGGAAAGATTGGAGTCACTTGACTTATCAAGAAA CCATCTCGGTGGTAGAATGCCTACAAGTTTTTCGAATTTGAGCTTTCTAAGCTACATGAACTTATCCTTCAACAACTTAT ATGGGGAAATTCCAATAGGCACTCAACTGCAATCTTTTAATGCCTCTTCATATATTGGGAACAAGGGGCTTTGTGGCCCA CCACTCTCAAACAGTTGCTCAGGGGATGTTATATCACCGAGTGTAAGCTCTGATGAAGATAAGATCATAACTTTTGGGTT TTACATCGCCCTGGTGCTTGGGTTTTTCGTTGGATTTTGGGGAGTTTGTGGAACTTTAGTCATAAAAGCTTCTTGGAGAC ATGCCTATTTCCAATTCTTCAATGACATGAATGACTGGATGCACGTGACAATAATGGTTTTTTCAAGAAGAATGAAAAGA AGATTTCGAGTCCAAGCCTAA
Protein sequence (LotjaGi2g1v0271600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFGCRFSLFCVVAILFICFFVQSSHTNKCKETERQSLLRFKGGATNVRKLLSSWKGEDCCKWKGISCDNLTGHVTSLDLD FQFMGGKLDSSICELKHLTSLDLGFNSLAGKIPKCIGNLSNLQTLVLGENYLVADDLDWVSHLSSLSFLGMSSVNLSQAV DWLSSISKVPSLSILSLSDCQLPPINPESTLHLNSSTSLEVLYLSENYLNSLTLASVLNVSRFLTALYLPYNEIEGSLPE SFLSLCQLKYLDLRSNKLSGQLSNNLNQLRCSQNGHLPYLYHLDLSINKLSGSLSSFDVTELASLEYLDLSRNQLSGSLP HGIGQLSNLTSLSIYSNKLSGVISETHLSNLYGLTELLVFQNSLSFNLSSKWIPPFQLERFFASSCNLGPTFPTWLKHQK RLYELDISNSGISDSIPEWFWDMFQSPYAVDVSHNQLSGPLPQNLTRILSRLDTFDFSFNNFSGPLPYFPQISGIFLSNN RFNGSLSSFCASPPQELHYLDLSSNLLEGSLLDCWGKFKNLVYLNLAENKLTGRIPKYFGTLEQMVSMHLNNNNFYGEIP SLTLCTSLILLDLGHNNLQGTLPAWVGHHLPQLIVLSLRENKFQGKIPESLCDLSFLQVLDLSWNNISGEIPQCLNHIIA LSNITFPRKSISYGRYYDHLNIKVHIGSFDDKAILSWKGAKREYGKNVGLVTTIDFSCNHLTGEIPQSITKLVALASLNL SSNDLTGSIPNNIGQMERLESLDLSRNHLGGRMPTSFSNLSFLSYMNLSFNNLYGEIPIGTQLQSFNASSYIGNKGLCGP PLSNSCSGDVISPSVSSDEDKIITFGFYIALVLGFFVGFWGVCGTLVIKASWRHAYFQFFNDMNDWMHVTIMVFSRRMKR RFRVQA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 28 | 28 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| Phobius | 8 | 19 | 12 | - | – | |
| PANTHER | 10 | 229 | 220 | 1.5E-159 | – | |
| PANTHER | 10 | 229 | 220 | 1.5E-159 | – | |
| Phobius | 20 | 23 | 4 | - | – | |
| Phobius | 24 | 824 | 801 | - | – | |
| Gene3D | 24 | 188 | 165 | 4.3E-38 | ||
| SUPERFAMILY | 29 | 264 | 236 | 1.03E-34 | – | |
| Pfam | 32 | 68 | 37 | 2.8E-9 | ||
| SMART | 95 | 119 | 25 | 36.0 | ||
| SMART | 95 | 121 | 27 | 1.4 | – | |
| Pfam | 97 | 153 | 57 | 2.1E-7 | ||
| ProSiteProfiles | 97 | 119 | 23 | 5.101 | ||
| ProSiteProfiles | 121 | 144 | 24 | 5.117 | ||
| SMART | 169 | 192 | 24 | 270.0 | ||
| ProSiteProfiles | 171 | 192 | 22 | 5.887 | ||
| Gene3D | 189 | 272 | 84 | 3.7E-10 | ||
| SMART | 197 | 219 | 23 | 250.0 | ||
| ProSiteProfiles | 198 | 219 | 22 | 7.127 | ||
| ProSiteProfiles | 223 | 244 | 22 | 5.279 | ||
| SUPERFAMILY | 224 | 474 | 251 | 3.23E-34 | – | |
| SMART | 245 | 268 | 24 | 53.0 | – | |
| SMART | 245 | 269 | 25 | 83.0 | ||
| ProSiteProfiles | 247 | 269 | 23 | 6.334 | ||
| Gene3D | 273 | 379 | 107 | 1.6E-17 | ||
| PANTHER | 277 | 385 | 109 | 1.5E-159 | – | |
| PANTHER | 277 | 385 | 109 | 1.5E-159 | – | |
| ProSiteProfiles | 279 | 301 | 23 | 5.417 | ||
| SMART | 302 | 321 | 20 | 670.0 | – | |
| SMART | 302 | 326 | 25 | 0.22 | ||
| ProSiteProfiles | 304 | 326 | 23 | 6.865 | ||
| Pfam | 304 | 323 | 20 | 1.5 | ||
| PRINTS | 305 | 318 | 14 | 1.6E-5 | – | |
| SMART | 326 | 353 | 28 | 10.0 | – | |
| ProSiteProfiles | 328 | 349 | 22 | 6.257 | ||
| Gene3D | 380 | 470 | 91 | 4.1E-13 | ||
| PANTHER | 390 | 859 | 470 | 1.5E-159 | – | |
| PANTHER | 390 | 859 | 470 | 1.5E-159 | – | |
| SUPERFAMILY | 468 | 803 | 336 | 1.1E-56 | – | |
| Gene3D | 471 | 811 | 341 | 1.1E-95 | ||
| ProSiteProfiles | 496 | 516 | 21 | 5.186 | ||
| ProSiteProfiles | 520 | 542 | 23 | 5.941 | ||
| SMART | 565 | 589 | 25 | 350.0 | ||
| ProSiteProfiles | 567 | 589 | 23 | 4.87 | ||
| Pfam | 570 | 627 | 58 | 2.8E-8 | ||
| ProSiteProfiles | 592 | 615 | 24 | 4.532 | ||
| SMART | 614 | 637 | 24 | 52.0 | ||
| SMART | 614 | 643 | 30 | 660.0 | – | |
| ProSiteProfiles | 616 | 638 | 23 | 6.21 | ||
| SMART | 712 | 735 | 24 | 230.0 | ||
| ProSiteProfiles | 714 | 736 | 23 | 6.295 | ||
| SMART | 736 | 762 | 27 | 37.0 | – | |
| PRINTS | 736 | 749 | 14 | 1.6E-5 | – | |
| SMART | 736 | 759 | 24 | 28.0 | ||
| ProSiteProfiles | 738 | 764 | 27 | 5.656 | ||
| Pfam | 738 | 760 | 23 | 0.099 | ||
| Phobius | 825 | 848 | 24 | - | – | |
| TMHMM | 826 | 848 | 23 | - | – | |
| Phobius | 849 | 886 | 38 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0271600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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