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LotjaGi2g1v0271700.1

Overview

Field Value
Gene ID LotjaGi2g1v0271700
Transcript ID LotjaGi2g1v0271700.1
Lotus japonicus genome version Gifu v1.2
Description Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT2G34930.1 disease resistance family protein / LRR family protein; Swiss-Prot: sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1; TrEMBL-Plants: tr|A0A072U675|A0A072U675_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi2g1v0271700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:74237363..74242010) extracted from Lotus japonicus Gifu genome v1.2.

CTGGACACAGGATTTATTATTTTCTTGCAGTCAAAATTAATTCAGTATGCACACAATGTCTTTGCCATGGGCCCAAGTTC AGTTGACTTGACTTAAGGCCATTAACTCTGAAACTTGACAGTAAGCAGTAGATACAAGCTGGTATTTTACATGGAGTTTA TTTGGTAAATGATTTAGCTTCTTCTAATTTCTGCTGTCTATAAAGCTAGCTAGATTTCACTTTACTCACACATTCCTCAC TTTGAAATTTCTAAAAATATTTTCCAGGGGAGTTGAGTGGGTAATTTAATCATGTTTGAGTGCAGGTTCAATAATCTGTT TTGTGTATGGGCCATTCTATGCATTTGTTTCTCTGTTGGAAGTTCCCATACAAAGAAGTGCAAGGAGGCAGAGAGGCAAT CTCTTCTCAAGTTGAAAGGTGGTTTCGTTAATGGAAGGAAACTTCTTTCCTCATGGAAAGGTGAAGATTGTTGCAAGTGG AAAGGAATTTCATGTGACAATTTAACTGGCCATGTAACCAGTTTGGATCTTGAAGCATTATATTATGATATTGACCATCC GCTGCAAGGTAAGTTAGATTCTTCAATATGTGAACTGCAACATCTGACTTCCTTAAATCTCAGTCAGAATAGATTAGAAG GAAAGATCCCTAAGTGCCTTGGCTCACTTGGCCAGCTGATAGAGCTGAATCTTGCATTTAACTATCTTGTTGGTGTTGTT CCTCCCACTCTGGGGAACCTTTCCAATTTGCAAACTCTTTGGATTCAAGGAAACTATTTGGTTGCAAATGATCTTGAGTG GGTTTCTCACCTTTCTAATTTGAGATACCTTGATCTGTCATCTTTGAATCTTAGTCAAGTTGTTGACTGGCTACCATCAA TAAGCAAAATAGTTCCTTCTCTGTCGCAGCTTTCGTTATCTGACTGTGGACTAACCCAAGTAAATCCTGAATCTACCCCC CTCTTGAACTCTTCCACTTCTCTCAAGAAGATTGATCTTAGAGATAATTATTTAAACTCTTTCACCCTGTCATTGATGCT TAATGTTGGAAAATTCCTCACACATCTTGATCTCAGGTCTAATGAAATTGAAGGTAGCTTACCAAAATCCTTTCTGAGTT TATGTCACCTAAAAGTGTTACAGCTTTTTTCCAACAAATTGTCTGGCCAACTTAGTGACAGCATACAACAATTGCAATGC TCACAAAATGTTTTAGAGAAGTTGGAGCTCGATGATAACCCATTTAGTAGTGGGCCACTCCCCGATTTTTCAGGGTTTTC ATCATTGACCTCATTACTTCTTCGAAACACCAATATCATTGGGCCTGTGACACAATCATTTGGCCATTTGCCTCATCTTC TAGTTTTGTATCTTTCCCATAATCGATTGAGTGGTGTGGATAACATTAATAAAACACAACTGCCAAACCTCTTAAATCTA GGTCTTAGTTTTAATGAATTGAGTGGATCATTGCCACTTTTTGAGGTTGCTAAACTTACCTCGTTAGAGTTTTTGGATCT CTCGCATAATCAGTTGAACGGGTCACTTCCATATACTATTGGTCAGCTCTCCCATCTCTGGTATTTGGATCTCTCTTCAA ATAAGTTGAACGGTGTCATCAATGAAACACATCTATTGAACCTATATGGATTGAAAGATTTGAGAATGTATCAGAACTCA CTTTCGTTCAACTTGAGTTCAAATTGGGTTCCACCTTTCCATCTGAAAAGGTTATATGCATCATCATGCATTTTGGGTCC TAAGTTTCCAACATGGCTCAAAAATCTAAAAGGACTTGCAGCATTGGACATCTCTAATAGTGGCCTTTCAGATTCCATTC CGGAGTGGTTTTTGGACCTGTTTCCAGGTTTAGAATACGTCAATGTTTCACATAACCAGCTTAGTGGACCTATGCCAAGA TCATTACGAAACTTGAATGTATCAACACCCATGAATTTGAGTATATTTGACTTCAGTTTCAACAACTTATCCGGTCCATT GCCTCCATTTCCACAATTAGAACACTTATTTCTCTCAAATAATAAGTTTTCAGGGCCTCTTTCATCTTTTTGTGCATCCT CACCAATACCATTAGGATTAACTTATCTAGACCTGTCTAGTAACTTACTAGAAGGACCACTTTTGGATTGTTGGGGAAAA TTCAAGAATTTAAAATTTCTGAATTTGGCCAAAAACAAATTATCAGGGAGAGTACCCAAGTCATTTGGCACTCTACGACA AATGGTGTCAATGCATTTAAACAACAACAACTTCTCCGGTGAAATTCCATTTATGACCTTGTCTAGCAGCTTGACTGTCT TGGATTTGGGTGATAACAATCTCCAAGGAACATTGCCAGCGTGGGTAGGACGTCACCTGCATCAGTTGATTGTTTTGAGT TTACGAGAAAATAAATTCCAAGGAAATATACCTGAAAGTCTGTGTAATCTATCATTCCTTCAAGTTTTAGATCTTTCTCT AAACAATTTTACAGGGGAAATACCACAGTGCTTCAGTCACATAACTGCTTTATCAAATACTCAATTTCCAAGAATACTCA TTTCCCATGTAACTGGAGATTTACTTGGTTATATGATGGATGGTTGGTTCTATGACGAGGCAACACTGTCATGGAAAGGG AAAAATTGGGAATATGGAAAAAATCTTGGACTCATGACTATCATTGATCTTTCTTGCAACCACTTGACAGGTAAAATACC ACAAAGTATAACAAAACTTGTGGCATTAGCTGGCTTAAATCTTTCAAGGAATAATCTCTCTGGATCCATTCCCAACAACA TTGGTCATATGGAATGGTTGGAATCACTTGACTTATCAAGAAACCATCTCTCTGGTAGAATGCCCGCAAGCTTTTCAAAT TTGAGTTTTCTTAGCGACATGAACTTGTCCTTTAACAATTTATCAGGGAAAATTACAACAGGAACTCAACTACAATCCTT TAAGCCCTCGTCATATATTGGGAACACTCTACTTTGTGGCCAACCTCTCACAAATCATTGTCAAGGGGATGTGATGTCAC CAACTGGAAGTCCTGACAAACATGTTACTGATGAAGATGAAGATAAGTTCATAACCTATGGGTTTTACATCAGCCTAGTG CTTGGGTTTATTGTTGGATTTTGGGGAGTCTGTGGAACCTTAGTTATAAAAGCTTCTTGGAGACATGCCTATTTCCAATT CTTCAACAACATGAATGACTGGATGTACGTGACAATAATGGTTTTTATAGGCAGAATGAAAAGGAGATTCTAAGTCCAAG CCTAACAGGTAAAGTTTTAACGCCTCCTAGTTTTTCAATAATAAGGGAATGATTTATTGTTTATTATGCACAAAAGAGTA TTATGATTGCACACATTTAAAGGAAGTTGAGATGATGTGTTTTATTCCCAATATTTGGCAGGTCACGCTTCAATGTGAGG TAGTGATACGCTGGAAGATAGTTGTGCCGTGGACGAACCACTGTCTTGAAAGCAAAAATTCCGACAGACCTCCTATGCAA TTCATTGCCGGGTTTGCTCCCTAAGGTTAACACAGCTGCATGTAAGACATTGTGCACTCAGAATTTACACATGTTGCAAT TTCTACAACAGTGCTCAGAATTTACAAAAAAGATGAGAATATTAGTTTCTTTTCTCTCATCCACATTCTATGCCTTTTGC ACCCATATGTTCTACTGCCATTTTATACTTATAGAAAATGTTGGAATCTGTTTTTACTCCTCCAACGTCTAGTCTTCACC ATCACAGGATAATTCATTGTGTTTTCAGGCATTAAAACAACACAATAATGCACATTAACCACAAAAGAAAGAAACTAATT TCTCTCTAACAGATTTATTTAACTCGCTTAATTTTGTTCAATAAATTTGAAACTGATATTTTAAATTGCATGTCATTATA TCCTTCAATCCCCCACTAATGGCAAGCAAGTTAAAAGAAAATTTCTGAGCAAAGAGAGTTAATATTTGTGCTTAAGTGTT AATGTCCATAGGATTGAATTAACACGTAGTGAAGTGAGACAACAACTTTTATCAAAAAAGTGAACGGATCTTGAACTATT TGACTCGGTTGGAACTCTCACTACACGCACCATAACTTTAAAATGTGGAGACTCCGCGATAAAATATTAAAGCCATTTTC CGAACCTTGGGATACATGTGAGCGTTTTAGAAATATTGTCCAAGTCTTTCATAGATAGCGGCTTTTACCATCTCACTCAC ATATTTATTCACATAAATTTTAAATGCATCTTATAAGCATTTAAGTGCGTCTCACAAAGCAGTTTCACACATGTCAGTTG TGAATAAACTTTTTTTTTAATAACGTTATTTGAAAGTCAAGTGCGTCTCAAAAGCACTTTATCATAGATACATCCAGTGC GTCTCAATAGCACCACCACAAATGGTTATGTATCTCTTTCAAAAATTAGCATTACCTCGCGTCATAGGGATGAGAATGTA ATGCATAAGAGTAATCATATGGCTTAGTTTGACCAACAAATTGGGTATCCAACATACTTTCTTCTTTCTCAAGGCTTAAG CCTCACCCCCCCCTCGACGTATCCAAGACAACTTTCTTGGTCAATCCTTTAGCAAAAAGATCAACAAGACTCTTTTATCT TCTTACAT 

CDS sequence (LotjaGi2g1v0271700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTTGAGTGCAGGTTCAATAATCTGTTTTGTGTATGGGCCATTCTATGCATTTGTTTCTCTGTTGGAAGTTCCCATAC AAAGAAGTGCAAGGAGGCAGAGAGGCAATCTCTTCTCAAGTTGAAAGGTGGTTTCGTTAATGGAAGGAAACTTCTTTCCT CATGGAAAGGTGAAGATTGTTGCAAGTGGAAAGGAATTTCATGTGACAATTTAACTGGCCATGTAACCAGTTTGGATCTT GAAGCATTATATTATGATATTGACCATCCGCTGCAAGGTAAGTTAGATTCTTCAATATGTGAACTGCAACATCTGACTTC CTTAAATCTCAGTCAGAATAGATTAGAAGGAAAGATCCCTAAGTGCCTTGGCTCACTTGGCCAGCTGATAGAGCTGAATC TTGCATTTAACTATCTTGTTGGTGTTGTTCCTCCCACTCTGGGGAACCTTTCCAATTTGCAAACTCTTTGGATTCAAGGA AACTATTTGGTTGCAAATGATCTTGAGTGGGTTTCTCACCTTTCTAATTTGAGATACCTTGATCTGTCATCTTTGAATCT TAGTCAAGTTGTTGACTGGCTACCATCAATAAGCAAAATAGTTCCTTCTCTGTCGCAGCTTTCGTTATCTGACTGTGGAC TAACCCAAGTAAATCCTGAATCTACCCCCCTCTTGAACTCTTCCACTTCTCTCAAGAAGATTGATCTTAGAGATAATTAT TTAAACTCTTTCACCCTGTCATTGATGCTTAATGTTGGAAAATTCCTCACACATCTTGATCTCAGGTCTAATGAAATTGA AGGTAGCTTACCAAAATCCTTTCTGAGTTTATGTCACCTAAAAGTGTTACAGCTTTTTTCCAACAAATTGTCTGGCCAAC TTAGTGACAGCATACAACAATTGCAATGCTCACAAAATGTTTTAGAGAAGTTGGAGCTCGATGATAACCCATTTAGTAGT GGGCCACTCCCCGATTTTTCAGGGTTTTCATCATTGACCTCATTACTTCTTCGAAACACCAATATCATTGGGCCTGTGAC ACAATCATTTGGCCATTTGCCTCATCTTCTAGTTTTGTATCTTTCCCATAATCGATTGAGTGGTGTGGATAACATTAATA AAACACAACTGCCAAACCTCTTAAATCTAGGTCTTAGTTTTAATGAATTGAGTGGATCATTGCCACTTTTTGAGGTTGCT AAACTTACCTCGTTAGAGTTTTTGGATCTCTCGCATAATCAGTTGAACGGGTCACTTCCATATACTATTGGTCAGCTCTC CCATCTCTGGTATTTGGATCTCTCTTCAAATAAGTTGAACGGTGTCATCAATGAAACACATCTATTGAACCTATATGGAT TGAAAGATTTGAGAATGTATCAGAACTCACTTTCGTTCAACTTGAGTTCAAATTGGGTTCCACCTTTCCATCTGAAAAGG TTATATGCATCATCATGCATTTTGGGTCCTAAGTTTCCAACATGGCTCAAAAATCTAAAAGGACTTGCAGCATTGGACAT CTCTAATAGTGGCCTTTCAGATTCCATTCCGGAGTGGTTTTTGGACCTGTTTCCAGGTTTAGAATACGTCAATGTTTCAC ATAACCAGCTTAGTGGACCTATGCCAAGATCATTACGAAACTTGAATGTATCAACACCCATGAATTTGAGTATATTTGAC TTCAGTTTCAACAACTTATCCGGTCCATTGCCTCCATTTCCACAATTAGAACACTTATTTCTCTCAAATAATAAGTTTTC AGGGCCTCTTTCATCTTTTTGTGCATCCTCACCAATACCATTAGGATTAACTTATCTAGACCTGTCTAGTAACTTACTAG AAGGACCACTTTTGGATTGTTGGGGAAAATTCAAGAATTTAAAATTTCTGAATTTGGCCAAAAACAAATTATCAGGGAGA GTACCCAAGTCATTTGGCACTCTACGACAAATGGTGTCAATGCATTTAAACAACAACAACTTCTCCGGTGAAATTCCATT TATGACCTTGTCTAGCAGCTTGACTGTCTTGGATTTGGGTGATAACAATCTCCAAGGAACATTGCCAGCGTGGGTAGGAC GTCACCTGCATCAGTTGATTGTTTTGAGTTTACGAGAAAATAAATTCCAAGGAAATATACCTGAAAGTCTGTGTAATCTA TCATTCCTTCAAGTTTTAGATCTTTCTCTAAACAATTTTACAGGGGAAATACCACAGTGCTTCAGTCACATAACTGCTTT ATCAAATACTCAATTTCCAAGAATACTCATTTCCCATGTAACTGGAGATTTACTTGGTTATATGATGGATGGTTGGTTCT ATGACGAGGCAACACTGTCATGGAAAGGGAAAAATTGGGAATATGGAAAAAATCTTGGACTCATGACTATCATTGATCTT TCTTGCAACCACTTGACAGGTAAAATACCACAAAGTATAACAAAACTTGTGGCATTAGCTGGCTTAAATCTTTCAAGGAA TAATCTCTCTGGATCCATTCCCAACAACATTGGTCATATGGAATGGTTGGAATCACTTGACTTATCAAGAAACCATCTCT CTGGTAGAATGCCCGCAAGCTTTTCAAATTTGAGTTTTCTTAGCGACATGAACTTGTCCTTTAACAATTTATCAGGGAAA ATTACAACAGGAACTCAACTACAATCCTTTAAGCCCTCGTCATATATTGGGAACACTCTACTTTGTGGCCAACCTCTCAC AAATCATTGTCAAGGGGATGTGATGTCACCAACTGGAAGTCCTGACAAACATGTTACTGATGAAGATGAAGATAAGTTCA TAACCTATGGGTTTTACATCAGCCTAGTGCTTGGGTTTATTGTTGGATTTTGGGGAGTCTGTGGAACCTTAGTTATAAAA GCTTCTTGGAGACATGCCTATTTCCAATTCTTCAACAACATGAATGACTGGATGTACGTGACAATAATGGTTTTTATAGG CAGAATGAAAAGGAGATTCTAA 

Protein sequence (LotjaGi2g1v0271700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MFECRFNNLFCVWAILCICFSVGSSHTKKCKEAERQSLLKLKGGFVNGRKLLSSWKGEDCCKWKGISCDNLTGHVTSLDL EALYYDIDHPLQGKLDSSICELQHLTSLNLSQNRLEGKIPKCLGSLGQLIELNLAFNYLVGVVPPTLGNLSNLQTLWIQG NYLVANDLEWVSHLSNLRYLDLSSLNLSQVVDWLPSISKIVPSLSQLSLSDCGLTQVNPESTPLLNSSTSLKKIDLRDNY LNSFTLSLMLNVGKFLTHLDLRSNEIEGSLPKSFLSLCHLKVLQLFSNKLSGQLSDSIQQLQCSQNVLEKLELDDNPFSS GPLPDFSGFSSLTSLLLRNTNIIGPVTQSFGHLPHLLVLYLSHNRLSGVDNINKTQLPNLLNLGLSFNELSGSLPLFEVA KLTSLEFLDLSHNQLNGSLPYTIGQLSHLWYLDLSSNKLNGVINETHLLNLYGLKDLRMYQNSLSFNLSSNWVPPFHLKR LYASSCILGPKFPTWLKNLKGLAALDISNSGLSDSIPEWFLDLFPGLEYVNVSHNQLSGPMPRSLRNLNVSTPMNLSIFD FSFNNLSGPLPPFPQLEHLFLSNNKFSGPLSSFCASSPIPLGLTYLDLSSNLLEGPLLDCWGKFKNLKFLNLAKNKLSGR VPKSFGTLRQMVSMHLNNNNFSGEIPFMTLSSSLTVLDLGDNNLQGTLPAWVGRHLHQLIVLSLRENKFQGNIPESLCNL SFLQVLDLSLNNFTGEIPQCFSHITALSNTQFPRILISHVTGDLLGYMMDGWFYDEATLSWKGKNWEYGKNLGLMTIIDL SCNHLTGKIPQSITKLVALAGLNLSRNNLSGSIPNNIGHMEWLESLDLSRNHLSGRMPASFSNLSFLSDMNLSFNNLSGK ITTGTQLQSFKPSSYIGNTLLCGQPLTNHCQGDVMSPTGSPDKHVTDEDEDKFITYGFYISLVLGFIVGFWGVCGTLVIK ASWRHAYFQFFNNMNDWMYVTIMVFIGRMKRRF 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 25 25 -
SignalP_EUK 1 25 25 -
Phobius 1 8 8 -
Phobius 9 20 12 -
PANTHER 14 248 235 1.1E-160
PANTHER 14 248 235 1.1E-160
Phobius 21 25 5 -
Phobius 26 935 910 -
SUPERFAMILY 30 319 290 1.08E-40
Gene3D 30 196 167 9.1E-44
Pfam 33 69 37 6.9E-10
SMART 102 126 25 21.0
SMART 102 128 27 760.0
ProSiteProfiles 104 127 24 6.341
Pfam 104 126 23 0.12
PRINTS 105 118 14 1.7E-5
ProSiteProfiles 128 151 24 4.601
SMART 150 179 30 330.0
ProSiteProfiles 152 175 24 5.61
SMART 174 197 24 280.0
ProSiteProfiles 176 197 22 5.371
Gene3D 197 398 202 6.5E-31
SMART 201 224 24 320.0
ProSiteProfiles 203 224 22 5.078
ProSiteProfiles 230 251 22 5.987
ProSiteProfiles 255 276 22 5.972
Pfam 256 277 22 0.43
SMART 277 300 24 400.0
ProSiteProfiles 279 301 23 5.286
ProSiteProfiles 307 328 22 4.747
SUPERFAMILY 309 589 281 2.07E-43
SMART 353 374 22 32.0
SMART 353 375 23 17.0
ProSiteProfiles 355 376 22 7.373
ProSiteProfiles 379 401 23 5.402
PANTHER 379 446 68 1.1E-160
PANTHER 379 446 68 1.1E-160
Gene3D 399 471 73 1.6E-13
SMART 402 425 24 7.2
SMART 402 417 16 200.0
PRINTS 402 415 14 1.7E-5
ProSiteProfiles 404 426 23 6.611
SMART 426 453 28 250.0
SMART 426 449 24 190.0
ProSiteProfiles 428 449 22 7.127
Gene3D 472 572 101 8.1E-18
PANTHER 486 970 485 1.1E-160
PANTHER 486 970 485 1.1E-160
SMART 524 547 24 250.0
SUPERFAMILY 562 907 346 2.24E-53
Gene3D 573 916 344 1.5E-95
SMART 573 596 24 220.0
ProSiteProfiles 575 597 23 5.471
SMART 600 629 30 450.0
ProSiteProfiles 602 622 21 5.425
SMART 624 647 24 400.0
ProSiteProfiles 626 648 23 5.263
SMART 672 695 24 150.0
Pfam 672 732 61 2.0E-6
ProSiteProfiles 673 695 23 5.24
SMART 696 722 27 250.0
ProSiteProfiles 698 721 24 4.647
SMART 720 743 24 84.0
ProSiteProfiles 722 744 23 5.163
Pfam 796 853 58 4.7E-8
SMART 816 839 24 240.0
ProSiteProfiles 818 840 23 5.871
SMART 840 866 27 340.0
SMART 840 863 24 52.0
ProSiteProfiles 842 863 22 5.409
ProSiteProfiles 866 888 23 4.847
Phobius 936 959 24 -
TMHMM 937 959 23 -
Phobius 960 993 34 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0271700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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