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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0311100 |
| Transcript ID | LotjaGi2g1v0311100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor protein kinase family protein; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|A0A151TFX7|A0A151TFX7_CAJCA Putative LRR receptor-like serine/threonine-protein kinase family; Found in the gene: LotjaGi2g1v0311100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78513071..78515002) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATTATCAGCTGCTACAGATAGTGGCATTTCTGACAGTGATAGCATTTGGAGGAGGCCTAAAGAGAACATCAGCAGA AGCATGCAGTTCAAATGACTTGGAAGGTTTGATAGGCTTCAAGAATGGAATTCAGATGGATACTTCTGGTCGTTTGGCAA AGTGGGTTGGTAGTAGCTGTTGTGAGTGGGAAGGCATTGTTTGTGAAAATGCAACCACTAGAGTGACACAGATCCATCTT CCAGGGTTCATAGAGAAAGATTTGTTTCAAACTCAGATGATTGGTAAGATTTCTCCTTCCATAACACTCCTCACCTCTCT TGTAATACTTGACCTTGGTGGTTTAGTAGGTCTCAGTGGGACAATTCCACAAACAATTGGTGTGCAACTGCCAAACCTCC AAAAGCTCTACCTTTTTGGCAACAATTTAACTGGTCCAATACCAGAAAGCATTGGTGAGTTGCCAAACCTCCAAGAACTG GCACTGCATGAAAATAAGATATCCGGGTCGATCCCTTCTAGCATTGGAAGCTTAAAAAGCCTCAAAAGTTTGCTGCTTTA TTCAAATAAAATTTCAGGTACAATACCCATTTCACTAGGGAATTTGACAAATTTGGTAGAATTGGATGTTCATGACAATG CTCTTAATGGTAATATACCCAACAGAATTGGTCAGATGAAGGCTCTTGAAAAGCTTGATCTTTCAAGCAATTCACTAAGT GGGAGCATACCTACTTCACTATCCAATTTAAGTGCAATTTCAGTTTTGTATATGGACACAAACTCTCTTGAGGGAACCAT TCCATTTCTCTCAAGATCAGGTGAAATGCCATCTCTTGGCTTCTTAAGACTCCATGATAACCATCTTAATGGAAATATAC CTCCTAGTCTTGGTTACCTGGTTTCTCTTCAGAGAGTTTCATTAGCAAACAACAAGCTTGAAGGAGCTTTGCCTTCTAGT TTGGGCAATTTGCTTTCTTTGACAGAACTTTACTTTAGTGGCAACTCATTGTCTGGCCAAATACCAAAATCAATAGGCCA ACTTTCTCAGCTAATGATGCTGAACATGTCCAACAATTTGATTGAAGGACCATTGCCTCAAGAGATTTCTCCCCTACACA ATCTTCAAACACTTGATCTTTCTTTCAACCCTCTGGACCTCTCTTCCTTTCCAGAGTGGCTAACAAACCTGCCATCGCTT TCGCGCATTCACTTCGCAGGATGCGGTATCCAGGGACAAATTCCAGACATTCTGCAAACAACCCTCAGTCCAATACAGGA ACTAGACTTATCAGTGAACCTTCTCACTGGAACCATACCATCATGGATAGGATCCCTCAGTCAGCTCTACTTGCTAAATC TCTCGAGGAATTCACTTGATTCACACATCCCTGATTCAGTTACAAGCTTGTCTGATCTGGGAGTTCTTGATCTTCACTCA AATAAGTTAACAGGCTCCATAACCGGAGCATTTGATATCGAACAAGGTACTTCTGGGGGATCACTAACATATATTGATCT TTCTGATAACAACTTCTCAATTGGAGTTGAGGAAATTGGTGCAGGAAGGCAGGTCCATATTCAGTTTCTGAATTTGTCTC ATAACCTTCTGAAGGGTACATTGCCAAGTTCCCTTGGGAAACTGAATTCCATTCACAGTTTGGATTTGAGCTTCAATGAG TTAGTCTCCAACTTGCCAGAGGTGCTGGCAAACTTGACATTGTTGGAGAGACTCAAGCTGCAAAGAAACCATTTCAGTGG CAATATACCCAAGGGACTTCTCAAGCTGACAAAGCTGAAGGAATTGGATTTATCAGACAATGTGCTTCAAGGGAAAATCC CAGAGGGTAAACCACTAACTGACTTTCCTGGGAGTTCTTATTCTGGAAACAAAGGTTTGTGTGGGAAGCCTCTCAGTCCT TGTTAACTTTGA
CDS sequence (LotjaGi2g1v0311100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTATCAGCTGCTACAGATAGTGGCATTTCTGACAGTGATAGCATTTGGAGGAGGCCTAAAGAGAACATCAGCAGA AGCATGCAGTTCAAATGACTTGGAAGGTTTGATAGGCTTCAAGAATGGAATTCAGATGGATACTTCTGGTCGTTTGGCAA AGTGGGTTGGTAGTAGCTGTTGTGAGTGGGAAGGCATTGTTTGTGAAAATGCAACCACTAGAGTGACACAGATCCATCTT CCAGGGTTCATAGAGAAAGATTTGTTTCAAACTCAGATGATTGGTAAGATTTCTCCTTCCATAACACTCCTCACCTCTCT TGTAATACTTGACCTTGGTGGTTTAGTAGGTCTCAGTGGGACAATTCCACAAACAATTGGTGTGCAACTGCCAAACCTCC AAAAGCTCTACCTTTTTGGCAACAATTTAACTGGTCCAATACCAGAAAGCATTGGTGAGTTGCCAAACCTCCAAGAACTG GCACTGCATGAAAATAAGATATCCGGGTCGATCCCTTCTAGCATTGGAAGCTTAAAAAGCCTCAAAAGTTTGCTGCTTTA TTCAAATAAAATTTCAGGTACAATACCCATTTCACTAGGGAATTTGACAAATTTGGTAGAATTGGATGTTCATGACAATG CTCTTAATGGTAATATACCCAACAGAATTGGTCAGATGAAGGCTCTTGAAAAGCTTGATCTTTCAAGCAATTCACTAAGT GGGAGCATACCTACTTCACTATCCAATTTAAGTGCAATTTCAGTTTTGTATATGGACACAAACTCTCTTGAGGGAACCAT TCCATTTCTCTCAAGATCAGGTGAAATGCCATCTCTTGGCTTCTTAAGACTCCATGATAACCATCTTAATGGAAATATAC CTCCTAGTCTTGGTTACCTGGTTTCTCTTCAGAGAGTTTCATTAGCAAACAACAAGCTTGAAGGAGCTTTGCCTTCTAGT TTGGGCAATTTGCTTTCTTTGACAGAACTTTACTTTAGTGGCAACTCATTGTCTGGCCAAATACCAAAATCAATAGGCCA ACTTTCTCAGCTAATGATGCTGAACATGTCCAACAATTTGATTGAAGGACCATTGCCTCAAGAGATTTCTCCCCTACACA ATCTTCAAACACTTGATCTTTCTTTCAACCCTCTGGACCTCTCTTCCTTTCCAGAGTGGCTAACAAACCTGCCATCGCTT TCGCGCATTCACTTCGCAGGATGCGGTATCCAGGGACAAATTCCAGACATTCTGCAAACAACCCTCAGTCCAATACAGGA ACTAGACTTATCAGTGAACCTTCTCACTGGAACCATACCATCATGGATAGGATCCCTCAGTCAGCTCTACTTGCTAAATC TCTCGAGGAATTCACTTGATTCACACATCCCTGATTCAGTTACAAGCTTGTCTGATCTGGGAGTTCTTGATCTTCACTCA AATAAGTTAACAGGCTCCATAACCGGAGCATTTGATATCGAACAAGGTACTTCTGGGGGATCACTAACATATATTGATCT TTCTGATAACAACTTCTCAATTGGAGTTGAGGAAATTGGTGCAGGAAGGCAGGTCCATATTCAGTTTCTGAATTTGTCTC ATAACCTTCTGAAGGGTACATTGCCAAGTTCCCTTGGGAAACTGAATTCCATTCACAGTTTGGATTTGAGCTTCAATGAG TTAGTCTCCAACTTGCCAGAGGTGCTGGCAAACTTGACATTGTTGGAGAGACTCAAGCTGCAAAGAAACCATTTCAGTGG CAATATACCCAAGGGACTTCTCAAGCTGACAAAGCTGAAGGAATTGGATTTATCAGACAATGTGCTTCAAGGGAAAATCC CAGAGGGTAAACCACTAACTGACTTTCCTGGGAGTTCTTATTCTGGAAACAAAGGTTTGTGTGGGAAGCCTCTCAGTCCT TGTTAA
Protein sequence (LotjaGi2g1v0311100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDYQLLQIVAFLTVIAFGGGLKRTSAEACSSNDLEGLIGFKNGIQMDTSGRLAKWVGSSCCEWEGIVCENATTRVTQIHL PGFIEKDLFQTQMIGKISPSITLLTSLVILDLGGLVGLSGTIPQTIGVQLPNLQKLYLFGNNLTGPIPESIGELPNLQEL ALHENKISGSIPSSIGSLKSLKSLLLYSNKISGTIPISLGNLTNLVELDVHDNALNGNIPNRIGQMKALEKLDLSSNSLS GSIPTSLSNLSAISVLYMDTNSLEGTIPFLSRSGEMPSLGFLRLHDNHLNGNIPPSLGYLVSLQRVSLANNKLEGALPSS LGNLLSLTELYFSGNSLSGQIPKSIGQLSQLMMLNMSNNLIEGPLPQEISPLHNLQTLDLSFNPLDLSSFPEWLTNLPSL SRIHFAGCGIQGQIPDILQTTLSPIQELDLSVNLLTGTIPSWIGSLSQLYLLNLSRNSLDSHIPDSVTSLSDLGVLDLHS NKLTGSITGAFDIEQGTSGGSLTYIDLSDNNFSIGVEEIGAGRQVHIQFLNLSHNLLKGTLPSSLGKLNSIHSLDLSFNE LVSNLPEVLANLTLLERLKLQRNHFSGNIPKGLLKLTKLKELDLSDNVLQGKIPEGKPLTDFPGSSYSGNKGLCGKPLSP C
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 18 | 18 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| PANTHER | 1 | 641 | 641 | 4.8E-174 | – | |
| PANTHER | 1 | 641 | 641 | 4.8E-174 | – | |
| Phobius | 4 | 14 | 11 | - | – | |
| Phobius | 15 | 18 | 4 | - | – | |
| Phobius | 19 | 641 | 623 | - | – | |
| Gene3D | 24 | 198 | 175 | 2.0E-44 | ||
| Pfam | 31 | 68 | 38 | 5.6E-8 | ||
| SUPERFAMILY | 58 | 385 | 328 | 1.8E-59 | – | |
| SMART | 130 | 152 | 23 | 200.0 | ||
| SMART | 130 | 156 | 27 | 770.0 | – | |
| Pfam | 131 | 191 | 61 | 6.8E-9 | ||
| ProSiteProfiles | 132 | 154 | 23 | 5.964 | ||
| SMART | 154 | 178 | 25 | 8.3 | ||
| ProSiteProfiles | 156 | 178 | 23 | 6.634 | ||
| SMART | 178 | 199 | 22 | 180.0 | – | |
| ProSiteProfiles | 180 | 203 | 24 | 5.81 | ||
| SMART | 202 | 221 | 20 | 390.0 | – | |
| SMART | 202 | 225 | 24 | 190.0 | ||
| Gene3D | 203 | 273 | 71 | 5.6E-18 | ||
| ProSiteProfiles | 204 | 226 | 23 | 5.163 | ||
| Pfam | 204 | 263 | 60 | 2.4E-6 | ||
| SMART | 226 | 252 | 27 | 4.1 | – | |
| SMART | 226 | 250 | 25 | 31.0 | ||
| ProSiteProfiles | 228 | 251 | 24 | 6.88 | ||
| PRINTS | 229 | 242 | 14 | 1.3E-5 | – | |
| Gene3D | 274 | 352 | 79 | 4.2E-19 | ||
| ProSiteProfiles | 278 | 300 | 23 | 5.209 | ||
| SMART | 300 | 323 | 24 | 46.0 | ||
| Pfam | 302 | 361 | 60 | 5.8E-7 | ||
| SMART | 324 | 348 | 25 | 36.0 | ||
| SMART | 324 | 350 | 27 | 85.0 | – | |
| ProSiteProfiles | 326 | 348 | 23 | 5.625 | ||
| ProSiteProfiles | 350 | 371 | 22 | 4.701 | ||
| Gene3D | 353 | 641 | 289 | 3.1E-76 | ||
| SMART | 372 | 389 | 18 | 54.0 | – | |
| SMART | 372 | 397 | 26 | 33.0 | ||
| PRINTS | 372 | 385 | 14 | 1.3E-5 | – | |
| ProSiteProfiles | 374 | 394 | 21 | 7.019 | ||
| Pfam | 374 | 388 | 15 | 1.1 | ||
| SUPERFAMILY | 387 | 641 | 255 | 4.53E-45 | – | |
| ProSiteProfiles | 424 | 446 | 23 | 4.739 | ||
| Pfam | 425 | 483 | 59 | 3.8E-7 | ||
| SMART | 446 | 469 | 24 | 100.0 | ||
| ProSiteProfiles | 448 | 470 | 23 | 5.702 | ||
| SMART | 470 | 493 | 24 | 78.0 | ||
| ProSiteProfiles | 472 | 494 | 23 | 5.248 | ||
| ProSiteProfiles | 501 | 521 | 21 | 4.693 | ||
| ProSiteProfiles | 526 | 548 | 23 | 5.448 | ||
| SMART | 548 | 567 | 20 | 280.0 | – | |
| SMART | 548 | 571 | 24 | 240.0 | ||
| ProSiteProfiles | 550 | 573 | 24 | 5.717 | ||
| SMART | 572 | 596 | 25 | 74.0 | ||
| ProSiteProfiles | 574 | 597 | 24 | 4.624 | ||
| SMART | 596 | 619 | 24 | 63.0 | – | |
| ProSiteProfiles | 598 | 620 | 23 | 7.088 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0311100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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