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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0417100 |
| Transcript ID | LotjaGi2g1v0417100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Regulator of nonsense transcripts 1-like protein; TAIR: AT5G47010.1 RNA helicase; Swiss-Prot: sp|Q9FJR0|RENT1_ARATH Regulator of nonsense transcripts 1 homolog; TrEMBL-Plants: tr|I1J9N5|I1J9N5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0417100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:91490178..91501926) extracted from Lotus japonicus Gifu genome v1.2.
TGTACACACTCATACGCTCATTCATCTTGTTTCTACTACGTCTATCTCTCTTCATTTCATTCTCATATCATGTGTTGTTG TTCGAGTGTCTCCTTCTTTATTTCCTCTTCCTTTCCCTTTCTCACTCCCAACCCTAACCCTAATCACAAAAATTCATGAC CCTTTCTCTTCCAATCTCTCACAACAACAACAACGCACTCTCTCAAAAACCCTAACTCAACAAGATCGCCGATAACCCCT TCCGATGGATTCACAGCAGAACAACAATCTCTTCGACACCGCTTCGCAACCCGACACCGCCAACGACGCTTACACTTTCC TCGAATTCAACACTCAGGGAGAAGATTTCGACTACCCGGAGTTTCGCGACCCGATTAGGTCACCGGTGGCATGGCCTACA CCGTCCGATTCGCTGGCTGACCCGTCTGAGCGAGGTGGAGCCGGGTCGGACCAACAGTCTGATGCCTCGCCTGTTTCGGT GGCTCCTGGAAGCGCGACCAAGGGGCGGTCTGGGAGCAGCGGTGGGAGTAGCCAGGTGGTGGATGCACTGGCTGCGGGGA TGAGCGGGTTGAATTTCGAGGATACTGGGGATGATGATAATTATGAGTATGGTAAAGGGGATTTCACTGAACATGCTTGT CGTTATTGCGGGGTTTCCAATCCTGCGTGTGTCGTGAGGTGCAATGTGCCTTCCTGTCGCAAATGGTTCTGTAATTCGCG GGGGAACACTTCCGGATCGCATATCGTGAATCACCTGGTGAGTTGTTGTATCGGCATTGCCATTTTTTGGTTGTTTGATT TTCGATTTGTGTTGTTCTTTGTATTTGGGTTAGTGGTGAACTCATCTTGTGTATTTAGAAATTGGAGAGTAAGGAAGTTC TAGCTTGTTCTTCATCAAATGCTGATGTATGGATCTATTTTGACCAAATATCAGATAGTTATTTGAAAAACTAAGAGTAG TTGAGGGGTGCCTATTACACAACTTATCAAATGTGGTAATTGATGTTGTTAGAACATAGTTATTTAGACAAATGAATGAA GTTGATAGTTGCAATGACCACCAATTGGAAAGTGACTTGAATATTTGGTTCCATTTCCCTAACTTAATAATGGTGTTAAA ACTGTTGACATTGACGTTGCTTTGCAGCTATAGGACGACAATGATCACAGGTCTTAGTTTAAAAGTTTTGATTATTATAG AATATATATTTATATTCGCTTTATATTAGCTTATGCCCCCTTTTGGATTTTAGCAAAAACTTTCATTCTGTAACACTGTT CTTCTGACCGTCCGTCACATTGTGTTATATATATGATGTCTCTTGATCAGAAGGCTGTCATTTTATTCTTGAATCCAGGT GATAAGATATGTTAAGATATTGATAGATAATGTATATCAGATCTAAGTTGTCAATCCTGGCGGGATCCCAGTTTCCCATC CCATCCCGGCCAAGTACTGGGATGACCACCCCCATCCTGTCAATCCCAGCCCAGCATTTCCTGCGGGATCCCCGCAGGAC AGTGAAATTTCCTGTTTTCCAAAAATGCCCTCCAAATTTAAACGTTGGGTTGTTTATTTAGGGGAATTTCCGAGTTTCGC AATGGACTAAACCCTAGCTCTGTTTTTTACATCTCCTCTGCTCTGCTTAGGTAGCTTCTGCCCTATCCTCTGCTAAGGTA GGCCTACGACTTTAGTATTTAAGTAGTTAAGTACCATGTATCTTTTTGTTTTTTAGTTATATAACTTTTGTTCAAGACCT ATGATTTTTATTGCTAGTTTGCTACTATTAAAGTATGCATATGCTATGAATTTCAAGTAATATTTATCATTGATTTGTGT GTGTGTTCGATTACTGCTTTTGGATTTGCATGTTTGCCATTTACCCGCCTATGTTCCTTTTATTACCTTTTTTATGACTA TGTATACGATCACTTTATCATCTCTTTTTATCTACTAACTGCATTTAGCTGATTTAATACTGCGTAAACAGTTAAAAGTA TCCTTACAAAGTAACATGGCGGGTAATTAGGCCTTGTAATGGAAATACTAGAAAAATGAATATAAAAATCTATTTATATC TGTACTGTCTATCTCCTCTGGTTAGTTTGAATTTCAAAAACTCACAATTTTTATATATAGTCAGTGAGTGACGATAAATA AGTTGCTTTTTGGACTTTGGAGTGGATATGTTTATGAATTTCAGATTCAAACATATCACTAGTTGACTCATAACTCCTGA AATTTTTGCTGTTGTATGGATATTTTAAGTATATATTTGTCATTGATGAGTAATTTGCTTCGATTTCTCCTTATTTTGTT GTTCATGTAGGTTCGAGCAAAACACAAGGAAGTATGTCTACACAAAGATAGTCCATTGGGAGAAACTATTCTTGAATGCT ACAACTGCGGGTGTCGTAATGTGTTTCTTCTTGGATTTATTTCTGCGAAGACAGAAAGTGTAGTTGTCCTTCTTTGTCGC GAACCGTGCTTAAGTGTTAATGCCTTGAAGGACATGAATTGGGACCTTAGTCAATGGTGCCCCTTGATTGATGATAGGTG TTTCTTGCAGTGGCTTGTCAAGGTTTCTATGCTTCTTACTTTCCTTGTGTTAATTAATCTAAGGTTATTTATTTTGCTAA ACTTTGTTACAATGTGGTTTTCTGCAGATCCCATCTGAACAAGAGCAGTTAAGGGCACGCCAAATTAGTGCACAACAAAT AAATAAGGTGGAAGAGTTGTGGAAGACAAATCCTGATGCTTCTTTTGACGACCTTGAGAAGCCTGGTGTAGATGATGAAC CTCAGTCTGTGGCTTTGAAATATGAAGATGCATATCAGGTGCGTCTTCAGGATGGCTTCTTAAGTTTTGCTTTTGTATTA TGGAGATGTCACCATTTTCATGGTTTACCCTTGGGGGCTTACCTTATTATGTTTCTTTTTTTGCCTTGTTTCTCAGTATC AAAATGTATTTGCACCTCTTATTAAGCTTGAAGCTGATTATGATAAGGTAATATTTTTCTTTACTCCAGTTTTATAACAT TGTATCATTAGCTGCTTAGCTTTTTAATTTTACTATATGTACTTTTTGACCTTCACCGACTATAAAAAAAGTCTGATTTT CCTCCATACCTCCCATCTTTTATAATGTTTGTTTGGTATCTTATATGCGTCATGTTGATGTAGATGATGAAAGAATCACA AAGCAAGGACAATGTCACAATTCGATGGGATATTGGTCTTAACAAGAAGCGTATTGCATACTTTGTATTTCCAAAGGTAA TATATCTTCTGCACAGTGCAATTGTTACTACTATGGTTGTACATTATTATATGTTCATTATATCATCTTATGTTTTTCAC TGTTTATATTCAATGTTTTCTTTGTTATTTATACTCTAGCTGTTGGATGATAAACAAGGTTGTGTCATTGTAGGAAGATA ACGAGTTGCGGCTGGTACCTGGTGATGAACTACGCTTGCGTTATTCTGGTGATGCTGCACATCCTGCATGGCAGTCAGTG GGTCATGTGGTATGCATGGCTGTTATTTTATCTTCAGTACTAAAACGAAAACTTACTGTCTGTGTTAAAATCTCATTCAA CTGCACTGTTACTCTGTTAGTATTCCTAAATTTAGTAAAAAATATTAATAAGAAAAAGGTTGATAAAAAAATAACGAAAA TTATTTTCAAATAGTGAAACTCCTACTTAATTTAACTCTCCTATATCATCCTCTTTTTTAGATCCATTAGTCTTTCGACT ACCCATTATCTATTCTTTTGTTGAAAGTAAAAGAAGCTCTGCTGACTGCTCTGTTAATTTGTTTTATTGTTCACTTTGTT TACTGCATGCAAACAACTAATATGGAACTACATTTATGATTATTTTAATATCTACAATTAGTTTCTTTTCTTTCTTTTAA TTATTCAGTAATGTGCTGTGTAAGGTGATTATATTCTATTTTCAGATCAAGTTAACTGCACAAGAGGAGGTTGCACTGGA GCTTCGCGCTAGTCAGGTAAATTTAGCTTTAATTTACAAACTGTAAGACCTCTCGAGCTCTTTATCCTTGCCTGGTGTTT ATTTCCTTTGGTCGTATGCAGGGGGTTCCAGTTGATGTTAACCATGGTTTCAGTGTTGATTTTGTCTGGAAGAGTACCAG CTTTGATAGGATGCAAGGAGCTATGAAAACCTTTGCCGTAGATGAGACAAGTGTTAGTGGGTAAGTTGGTCCTAGGCAGG GCTTAATCGCATTAGTTTGGATGCGCTATATTTCCTACTATTCCATTTACGTTATGTTTCCTCCATTGTTTGGGGTTAGG ATTGGGTGGGCAATGGGCCAGTATACACTATCCTTTTATTACCTGGGACTGAGTGTTTTGTCCGTAGGATGATTTAGGAG ACAGTTGTGTGAAGTCATGCTTGAGCATATGTGTATTGTAAGGGAACAATCATGTCAATAGCATCATTGCAGTTTTATGT CTGTTTTAACTAACTATGGGATCTCCTAACAAAGTTTATATTGTTCTGATGGATTTTTGCTTTGCATTTGTTCATCTGTA ATTCTTAACTTTGCTGATTAATATGCAGGTATATATATCATCACTTATTGGGTCATGAAGTTGAGGTTCAGTTGGTGCGT AATGCATTGCCTCGTCGCTTTGGTGCACCAGGGCTTCCCGAACTGAATGCATCACAAGTATGGTGTAGTTTCCCCTGATC TATTATCGTAGTCATGTTTTATTATTCTCGCAAACATGTTTTACATCTCCATTTTGTTTCTTGCTGTTGTCAGATCAACT ACTTCCCATTCATCTGTTCTTAGAATATGTTATGGGAATTGGTAGCAAACCTATTTGAGGTGTGGGGGATAGTGTAGCAA AATGCTGTTATCCTTTATTTGGATGGTTGAGATTGATGAGAAAACATATGGCATTTTAAATTTTGTTATTAACTGACTAT TATGATAACGTTATTTCCTAAAAGATATATATATATATATATATATATATATATATATATATTAATAACTAACTGTTATG CTAACTGCGTATTCTAATGATGATTCTTATAAAATATATTTTAACTATAATATGTAGCAGAGATGTAGCTATAAATTTAA AGGTATATAGCAACTTTAGTCTCCTCCAAAATCCCCCTAATTAGGGAACTTTGAAAAGTTTGTGCTGGAGGATTTTGGAC ACTTCAGAGTCTCATTTTCCCTTCTCAGTTAAGAAATCTCTAAAGTAAGGATAATGCTTTCCTTTGATCTTCTCTTCTCC TCCATTATCCAATCGGGCTTCATCCAAATAAGGATTTTAGTGAAAGAATTTGTTATTAGTTGTTACTCTAGATTTTTGAA TTACTTTCCTATGCTTAACTTAGTAATGTGAAAGATTATGATACCTACACAAAATTGGAATAATAACTTCAATTTTATTT TGTACTAGATATGGTTTCATGAAATGTTGGAAGTATAGATCAGCATATCTGGTGATTATTGTTATGCTTAGGCTTACTGT TGCTCTTAGTTACAGCTGTTACAACTTCCTTAAGAAGCTTCATTATGCACATTAGTTATCTAGGAGATTATAATATCAGG TTTCAGATTAGAATGCACAATATACTCATTTTCATATTCATTCTCTCTTCATCACAAACTATTTTTAAAATTTCCTCTGG ATGGTGTTTTTTAAACTCACTGATCTCCTACGTTCTAGGTTTATGCCGTCAAGAGTGTTCTCCAGAGGCCTATTAGTTTG ATTCAAGGACCACCTGGAACTGGTAAGACTGTAACTTCTGCAGCGCTTGTATACCACATGGCCAAACAAGGTCAGGGACA GGTATGTTCTTAAATTTTTTCTAGATATAAATCTATAGTTTCTTTTCCAGCTTTTCTCTTGCTTCTGTTTATTCACATAT TCTATCGCCCACTCCTCTCCCAACTTATTTTTCAGGTTTTGGTTTGTGCACCCAGTAATGTAGCTGTGGATCAACTGGCT GAAAAAATAAGTTCTACTGGATTAAAGGTATCATTGCTATTTATTCTGTTTCAGAGTTGGTTATATATTAAAATTGTTAA CCTTCCATGTAATACAATTATTTCATTCAAGGTTGTGAGGCTATGTGCAAAATCGAGGGAAGCTGTGAGTTCACCTGTAG AGCATTTAACTCTTCACTATCAGGTTAGTGTTACATTTCAGCACCAATTTTCTTTCCATACCTTGGCCATTTTAGTTTAT TTTTCCTCTTAAATCAATGGTGAACATTGTCTGAATGTGATTGGCTCCTGCAGGTTCGACATCTTGACACATCTGATAAG AGTGAACTTCATAAGTTACAACAGCTAAAGGATGAACAAGGTCTGGGCTTTATTTGTGCTCAAAAGCTAATCAATCTTAG AAAATAGTCTGATTGGTATCCTAAGTTCAGAAAATATTGTCTTACAAAAATGACAATTATTTTGTTTAATCATGTTTCAG GAGAACTTTCCAGCAGTGATGAGAAAAAATACAAAGCACTTAAGCGAGCAACCGAGAGGGAGATTTCTCAGAGTGCTGAT GTGATCTGCTGTACATGTGTTGGTGCTGGAGATCCTCGGCTTGCAAACTTTAGGTTCCGTCAGGTTGATATATATGTTAC TTGCAATGTATAATTGCCATATTCTTGTTCAATTCCTTACACCTTCGATATCTTTTTAAGGTACTTATTGACGAGTCCAC CCAAGCAACAGAACCTGAGTGCCTCATTCCTTTGGTTCTTGGAGCAAAGCAGGTATTTGTCAAATCTGCACATGCAGTTG TGTACTCTTTAATTGTTGATGTTTTAACATGATGTTTCTGTTTAGGTTGTTCTTGTTGGTGATCATTGTCAGCTTGGTCC AGTTATTATGTGCAAGAAAGCAGCTCGTGCTGGGTTAGCACAATCGCTTTTTGAGCGCCTTGTTCTACTCGGTGTCAAAC CAATTAGGTTGCAGGTAATGGATCTCTTAATTTTCATGTGACGATTCATGGATGAATTGCTATCTTGACAAGCTGCTGGA TTATGTCAGGGCTTGGGATCTCATGCTGAGTTCTTTTAGTTTTGGCTTGACTTTTTATTTGCTGACTATAAGTTTTTGTT TTACTCTGTCAAATATCAGGTTCAGTACCGTATGCATCCATGCCTTTCAGAATTTCCCTCAAACAGCTTTTACGAAGGCA CTCTGCAAAATGGAGTCACTGTTAATGAAAGGCAATCTTCAGGAATTGATTTCCCATGGCCTGTACCAAACCGTCCCATG CTTTTTTATGTTCAGGTATTGTGATACGTATTACACTTGTCATGTTTGTGAATGTTGATTCTTGTTGTAGCAATATTTCG ATGGTCATCCATGGACACTATTGAATTTTTGGTTTTCTTCTTTTAACTTGCCACTTATCATATCCTTTGTCCCTTCTGCT GTTCTCTCAGTTTTCTTTTTATTGTTTATGGAATGTTGTCTAGATGGGACAAGAAGAGATAAGTGCTAGCGGAACATCTT ATTTAAATAGGACTGAAGCTGCAAATGTTGAAAAGATTGTAACCACTTTCTTAAAAAGTGGGGTGGTTCCTAGTCAGGTA TCTTTTGGTCTGGATTTAGTTGTTATGTTATGTCAATGCTGTTAATATTTATATTTTCCTCTCTTTTAATGTTAAACAGA TTGGTGTGATAACACCTTATGAGGGGCAAAGAGCTTATATTGTGAACTATATGTCAAGAAATGGTTCTCTTAGGCAGCAA CTTTACAAAGAGATTGAGGTTTCATACTGATACCATGTTTTATATGCTATCTCTGACCTAGCCACAGTTGCAGCATTAAT GTTGTTCTTTTCAGGTTGCTAGTGTTGATTCCTTCCAAGGAAGGGAGAAAGACTACATTATTCTATCATGTGTTAGAAGT AATGAACATCAGGTTGATAGCTAACCCATCCTTTTGCTAGCATTATTTGTGGCTTTGTTCTAAGTTCACTTGCTTCAAAT GTCTACATTTTGTTGCCATTATTATTATAAATTTTGATGGATCAATGGTTGGCTTCTATACCTTTTTAGGGCATTGGATT CCTGAATGATCCTAGGAGGCTAAATGTTGCTCTGACACGAGCAAGATATGGTATTGTTATTCTGGGAAACCCTAAAGTTC TGAGCAAGCAGCCTTTGTGGAATGGTTTATTGACTCACTACAAGGTAGTTCTTGTGTATTAGAAATATATTGCTCCTGTA GTTGATTTCTTTTTTGAAAATAGACATACAAGCACAGCAAGAGCTGGAAGTTTATTTGGAATATTTGTGGAAACTACAGA AATCTATTTCGCACCCATTTAAAGTCTATTTTCCCCCCTATCATAAGCTCTCTCAGGAAGTCACTAAACCATTATTTCCT CAAAATAAGCTAATCTTGACAAGTACTGCTCCTTTATGATTCATTGTTAAAATTTCTCCCTCATATTTTATGTGGGATTT GATACGTTTCCATTTTGTGCAGTGTTTATAATTTTCTAAATGAGCTGTGCTTTGCCCCCATTTTCTAAACAGGAACATGA ATGCTTAGTTGAAGGACCTTTAAATAACTTGAAGCAGAGTATGGTTCAGTTCCAGAAACCCAAGAAGGTAGGTATCAAAT TATTACAGTGTGTTGGTTTATGTACCTCACACCCCGGGCTGTGGCAGAGTGTTGTTAATGGATTCACCAGGGTTTTTTTC TGGGTTGTTTTTCTGATGAGGCATGTGTTTATCAACAATAACAATGTTACATATCAATATAACACTTCATCTTGTTTTGT ACAGATCTACAATGAACGAAGGCTTTTTTATGGGGGTGGACCTGGAATTGCAGCTAATGACAATTTTGGTTCTGGTGCTG GCACAAGTTCAGATCGGCGGAGCGGTCGTGGAAGGGGTATGTAATTATTATTCTTGGGACTTGGTTTCTTTTTCAATACA CTTCTGGTGTTTTATTAAGTTCTTATTATCTCCTACGCCCTCTTCTGGCTTCTGGAGCTTTTGTTCAATCACTTAGACTT TATGATTTTTGCTGTCAACTTTAGGATCTTATATACCTCCTGGCCCACCAAACGGAGCCCATAAACCCGGATTGCACCCT GCTGCATATCCTGTACCAAGGGTTCCCTTGCCTCCTTTTCATGGTGGTCCCCAATCTCAACCATATGCAATTCCATCTCG TGGGGCTGTTCACGGACCAGTTGGTGCTGTTCCTCATGTCCCATCTCCGGGAAGTCGGGGTTTTGGGGCAGGTAGAGGTA ATTCCGGTGCTCCAATTGGTAATCATCTTCCACACCAACAGGGCACGCAACAGCCTATTGGGAATATTGGATCTACATTT AACTTCCCTGGTTTAGAGAGTCCTAACAGCCAGCCATCTGTTGGTGGCCCACTGTCGCAACCTGGGTTCGCCAATAATGT ATGTAATTTCCTTATTCCAGCTTCATCGTTCTATTTTCATGCGCCCGTGACCTTTTCTTTTTCCGGTTAAGTTCTGATTT TAATTTTCTTGCAAATATTAGATGCCAGTCCAAGGGGCAGGCCAGTCATTTCGAGATCAATTTACTGTACCTGGATTGTC TCAGGTGCTTAATATTAATTTGGTAGCATCTTGATATTGTTTCTAATTTCTATGTAAAATGTGCTCATTGTTGTCGTCTT GTTTTAAATTATCATCAGGACTTCTTGGGTGATGACTTCAAAAGCCAGGGATCTCATGTTCCTTATAATGTAACGGATTT CTCTACACAGGTTTGTGAACTGTTATGGTTAATTTGTACATCACAAGTCTTTGTTTTTATGAAACCTAAATCCCGTCATT CATTTACTGCCTTTTTATTAGTCATAAGCTTTAAATATTCAGCTCATTTTTTTGTTGCTTTCTATTTTTTTTCCTCCGAA CACTTTGTCTACTGGAAGGCTTCTCAAAGTGGGTATGCTGTTGATTATGCTACACAAGGAGCACAAGGTGGATTCCCAGG GAACTTTCTTAATCAGAATTCTCAAGCTGGGTATTCACGTTTTGGTTCTGGAAATGACTTTATGTCTCAGGTTGCTGAAG TTGCTACTATTGAATCTTTCTTTCCCCATCAATTTGAATTGCTTAGTCATTCCTGTTCTTATTTTCCTTTTTTTAATCTA CAGGACTACATGGCCCATGGATCACAGGGTCTCTTCACTCAGGTTGGATTCAGCGATCCCTTGCAAGATGATGCAACACA GAACCATTTCAACATGGCAAATGCTAACCCTCTTCAATCTCAGGTTTCCTGTAGTTCCAGCTTTTTATAATGATGATGCC TAATAATATAACAATTAGCAATTAAAATTGAAATAATGTGGTTGTTTTATCCCTTGTTTTCCTGACAAGTGACAATCTTG GTTGTTGATGTTATTTGACACGTGCAACTCTTCCATCCAATAATTTATCTGGGTTCTTTGCAGATGAGTTCTCTCTACTC TCAGCCTTTTGCTCACTACAACACACAGCCGCCAAACATGCAGGCTTCCCAACAGCAGCCTCAGGGTCAGAGCTCCCAAA ATCAGAAAATTCACTACAACGGTTGAGAAACTGTAGGAGCTTAATGTGGCTTTGATGGGTTATAGTCTTTGCATTCAGCA ATTGGGTTTGTGCCTGTCTTTTGTGCTGAAATATGTTGCATGAGACGTCTAAAGGATTTCCATCATGGGATACCCATACT AAAGGATTGGTATATATGATCTGAGTTTGGTGCAATTGTGGCGCATTAAGAAGATACTGGCAGACACATCCCGAGCTGAA AAATGAAAAGATAACCCTGTTACCTTGATGAAATTTTGTATTGTTTGGGATTAGAGTGAAATTGTTCGAGAAAGCATTAC ATGGAATGGTTTTGGCGAAAGGGTTTCGATCTTGGAAGCAGAAGGAGCTGTTTGAATTGTTGTCGTCGGTGAAATACTGA TTAATATAGTAATCCACATGGCACTGATCATCGCCAAAGGGAGTTCTGTACAGAAGGCAGGAATGCGGTGAACCCTTTCA GCTCTTCCTGACATGTAATTATACTCGATATATTTTAAGACTCCTTGATATGTCGGAAAGTTATAGACTATGCAACTATT GCCACTCAAAATTGTGTGGGCATATAAAGGTGTGATTGTTTTTCATGTAAATTAGGTTTGCAACAAGTGCTAGTCATGAG TGCCTAATTCCCAAAAATGAGATTGTTCAATCTCCTGGGTTAAACACCATTCTGTGTTAGAAGTTTGAAATCCAATTATA TTCATCGCCCTTAAAAGTCTTAACAGGATTTTCTATAATAGTTACGGTTAAAATTGTGATAAAATTGTTTCAATGCTTAT CAAAATTTGTTATATTAATTTTTGGGTAACAATTTAAAGTTGTACTTTGTATTTAACCTACACAAATATTTCTTCCTCGT TGACAGATTTACTTGTTGAGTTTTTGATTTTGTCTATTAACATTGGTGGAATGAAAAGGAAGACAGAAGTCGACCATTTT AATTTGTGATTAAGATCCTCTACCCCATTTGGTTTCTCCTTAATTGTCAATTGTCATGTTAATAAAAAAAAAGTGCACGG GAGCATGAACTTGCATGTAACCAAAATAAAACATACATGTGAATTTTAAATGGTGTGATATAGTTAATTGTTGGGACATG GAATGAATCAAAGGAGACAGATGATTTTGGTCTGTTTCAAGAAATAATTTTTCTCAACGAACTTAAGGT
CDS sequence (LotjaGi2g1v0417100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTCACAGCAGAACAACAATCTCTTCGACACCGCTTCGCAACCCGACACCGCCAACGACGCTTACACTTTCCTCGA ATTCAACACTCAGGGAGAAGATTTCGACTACCCGGAGTTTCGCGACCCGATTAGGTCACCGGTGGCATGGCCTACACCGT CCGATTCGCTGGCTGACCCGTCTGAGCGAGGTGGAGCCGGGTCGGACCAACAGTCTGATGCCTCGCCTGTTTCGGTGGCT CCTGGAAGCGCGACCAAGGGGCGGTCTGGGAGCAGCGGTGGGAGTAGCCAGGTGGTGGATGCACTGGCTGCGGGGATGAG CGGGTTGAATTTCGAGGATACTGGGGATGATGATAATTATGAGTATGGTAAAGGGGATTTCACTGAACATGCTTGTCGTT ATTGCGGGGTTTCCAATCCTGCGTGTGTCGTGAGGTGCAATGTGCCTTCCTGTCGCAAATGGTTCTGTAATTCGCGGGGG AACACTTCCGGATCGCATATCGTGAATCACCTGGTTCGAGCAAAACACAAGGAAGTATGTCTACACAAAGATAGTCCATT GGGAGAAACTATTCTTGAATGCTACAACTGCGGGTGTCGTAATGTGTTTCTTCTTGGATTTATTTCTGCGAAGACAGAAA GTGTAGTTGTCCTTCTTTGTCGCGAACCGTGCTTAAGTGTTAATGCCTTGAAGGACATGAATTGGGACCTTAGTCAATGG TGCCCCTTGATTGATGATAGGTGTTTCTTGCAGTGGCTTGTCAAGATCCCATCTGAACAAGAGCAGTTAAGGGCACGCCA AATTAGTGCACAACAAATAAATAAGGTGGAAGAGTTGTGGAAGACAAATCCTGATGCTTCTTTTGACGACCTTGAGAAGC CTGGTGTAGATGATGAACCTCAGTCTGTGGCTTTGAAATATGAAGATGCATATCAGTATCAAAATGTATTTGCACCTCTT ATTAAGCTTGAAGCTGATTATGATAAGATGATGAAAGAATCACAAAGCAAGGACAATGTCACAATTCGATGGGATATTGG TCTTAACAAGAAGCGTATTGCATACTTTGTATTTCCAAAGGAAGATAACGAGTTGCGGCTGGTACCTGGTGATGAACTAC GCTTGCGTTATTCTGGTGATGCTGCACATCCTGCATGGCAGTCAGTGGGTCATGTGATCAAGTTAACTGCACAAGAGGAG GTTGCACTGGAGCTTCGCGCTAGTCAGGGGGTTCCAGTTGATGTTAACCATGGTTTCAGTGTTGATTTTGTCTGGAAGAG TACCAGCTTTGATAGGATGCAAGGAGCTATGAAAACCTTTGCCGTAGATGAGACAAGTGTTAGTGGGTATATATATCATC ACTTATTGGGTCATGAAGTTGAGGTTCAGTTGGTGCGTAATGCATTGCCTCGTCGCTTTGGTGCACCAGGGCTTCCCGAA CTGAATGCATCACAAGTTTATGCCGTCAAGAGTGTTCTCCAGAGGCCTATTAGTTTGATTCAAGGACCACCTGGAACTGG TAAGACTGTAACTTCTGCAGCGCTTGTATACCACATGGCCAAACAAGGTCAGGGACAGGTTTTGGTTTGTGCACCCAGTA ATGTAGCTGTGGATCAACTGGCTGAAAAAATAAGTTCTACTGGATTAAAGGTTGTGAGGCTATGTGCAAAATCGAGGGAA GCTGTGAGTTCACCTGTAGAGCATTTAACTCTTCACTATCAGGTTCGACATCTTGACACATCTGATAAGAGTGAACTTCA TAAGTTACAACAGCTAAAGGATGAACAAGGAGAACTTTCCAGCAGTGATGAGAAAAAATACAAAGCACTTAAGCGAGCAA CCGAGAGGGAGATTTCTCAGAGTGCTGATGTGATCTGCTGTACATGTGTTGGTGCTGGAGATCCTCGGCTTGCAAACTTT AGGTTCCGTCAGGTACTTATTGACGAGTCCACCCAAGCAACAGAACCTGAGTGCCTCATTCCTTTGGTTCTTGGAGCAAA GCAGGTTGTTCTTGTTGGTGATCATTGTCAGCTTGGTCCAGTTATTATGTGCAAGAAAGCAGCTCGTGCTGGGTTAGCAC AATCGCTTTTTGAGCGCCTTGTTCTACTCGGTGTCAAACCAATTAGGTTGCAGGTTCAGTACCGTATGCATCCATGCCTT TCAGAATTTCCCTCAAACAGCTTTTACGAAGGCACTCTGCAAAATGGAGTCACTGTTAATGAAAGGCAATCTTCAGGAAT TGATTTCCCATGGCCTGTACCAAACCGTCCCATGCTTTTTTATGTTCAGATGGGACAAGAAGAGATAAGTGCTAGCGGAA CATCTTATTTAAATAGGACTGAAGCTGCAAATGTTGAAAAGATTGTAACCACTTTCTTAAAAAGTGGGGTGGTTCCTAGT CAGATTGGTGTGATAACACCTTATGAGGGGCAAAGAGCTTATATTGTGAACTATATGTCAAGAAATGGTTCTCTTAGGCA GCAACTTTACAAAGAGATTGAGGTTGCTAGTGTTGATTCCTTCCAAGGAAGGGAGAAAGACTACATTATTCTATCATGTG TTAGAAGTAATGAACATCAGGGCATTGGATTCCTGAATGATCCTAGGAGGCTAAATGTTGCTCTGACACGAGCAAGATAT GGTATTGTTATTCTGGGAAACCCTAAAGTTCTGAGCAAGCAGCCTTTGTGGAATGGTTTATTGACTCACTACAAGGAACA TGAATGCTTAGTTGAAGGACCTTTAAATAACTTGAAGCAGAGTATGGTTCAGTTCCAGAAACCCAAGAAGATCTACAATG AACGAAGGCTTTTTTATGGGGGTGGACCTGGAATTGCAGCTAATGACAATTTTGGTTCTGGTGCTGGCACAAGTTCAGAT CGGCGGAGCGGTCGTGGAAGGGGATCTTATATACCTCCTGGCCCACCAAACGGAGCCCATAAACCCGGATTGCACCCTGC TGCATATCCTGTACCAAGGGTTCCCTTGCCTCCTTTTCATGGTGGTCCCCAATCTCAACCATATGCAATTCCATCTCGTG GGGCTGTTCACGGACCAGTTGGTGCTGTTCCTCATGTCCCATCTCCGGGAAGTCGGGGTTTTGGGGCAGGTAGAGGTAAT TCCGGTGCTCCAATTGGTAATCATCTTCCACACCAACAGGGCACGCAACAGCCTATTGGGAATATTGGATCTACATTTAA CTTCCCTGGTTTAGAGAGTCCTAACAGCCAGCCATCTGTTGGTGGCCCACTGTCGCAACCTGGGTTCGCCAATAATATGC CAGTCCAAGGGGCAGGCCAGTCATTTCGAGATCAATTTACTGTACCTGGATTGTCTCAGGACTTCTTGGGTGATGACTTC AAAAGCCAGGGATCTCATGTTCCTTATAATGTAACGGATTTCTCTACACAGGCTTCTCAAAGTGGGTATGCTGTTGATTA TGCTACACAAGGAGCACAAGGTGGATTCCCAGGGAACTTTCTTAATCAGAATTCTCAAGCTGGGTATTCACGTTTTGGTT CTGGAAATGACTTTATGTCTCAGGACTACATGGCCCATGGATCACAGGGTCTCTTCACTCAGGTTGGATTCAGCGATCCC TTGCAAGATGATGCAACACAGAACCATTTCAACATGGCAAATGCTAACCCTCTTCAATCTCAGATGAGTTCTCTCTACTC TCAGCCTTTTGCTCACTACAACACACAGCCGCCAAACATGCAGGCTTCCCAACAGCAGCCTCAGGGTCAGAGCTCCCAAA ATCAGAAAATTCACTACAACGGTTGA
Protein sequence (LotjaGi2g1v0417100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSQQNNNLFDTASQPDTANDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLADPSERGGAGSDQQSDASPVSVA PGSATKGRSGSSGGSSQVVDALAAGMSGLNFEDTGDDDNYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRG NTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNWDLSQW CPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDASFDDLEKPGVDDEPQSVALKYEDAYQYQNVFAPL IKLEADYDKMMKESQSKDNVTIRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEE VALELRASQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQLVRNALPRRFGAPGLPE LNASQVYAVKSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSRE AVSSPVEHLTLHYQVRHLDTSDKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANF RFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPCL SEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMLFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPS QIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARY GIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRLFYGGGPGIAANDNFGSGAGTSSD RRSGRGRGSYIPPGPPNGAHKPGLHPAAYPVPRVPLPPFHGGPQSQPYAIPSRGAVHGPVGAVPHVPSPGSRGFGAGRGN SGAPIGNHLPHQQGTQQPIGNIGSTFNFPGLESPNSQPSVGGPLSQPGFANNMPVQGAGQSFRDQFTVPGLSQDFLGDDF KSQGSHVPYNVTDFSTQASQSGYAVDYATQGAQGGFPGNFLNQNSQAGYSRFGSGNDFMSQDYMAHGSQGLFTQVGFSDP LQDDATQNHFNMANANPLQSQMSSLYSQPFAHYNTQPPNMQASQQQPQGQSSQNQKIHYNG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1178 | 1178 | 0.0 | – | |
| PANTHER | 1 | 1178 | 1178 | 0.0 | – | |
| MobiDBLite | 1 | 27 | 27 | - | – | |
| MobiDBLite | 1 | 97 | 97 | - | – | |
| MobiDBLite | 65 | 97 | 33 | - | – | |
| Pfam | 130 | 283 | 154 | 6.7E-71 | ||
| Pfam | 335 | 424 | 90 | 2.4E-33 | ||
| Gene3D | 336 | 424 | 89 | 4.1E-38 | – | |
| SUPERFAMILY | 477 | 939 | 463 | 1.84E-73 | ||
| CDD | 480 | 715 | 236 | 3.20722E-167 | – | |
| Pfam | 483 | 550 | 68 | 3.5E-5 | ||
| ProSiteProfiles | 489 | 621 | 133 | 10.226 | ||
| Pfam | 581 | 683 | 103 | 1.3E-28 | ||
| Pfam | 693 | 888 | 196 | 2.1E-60 | ||
| Gene3D | 715 | 926 | 212 | 1.7E-75 | – | |
| CDD | 716 | 905 | 190 | 1.13257E-78 | ||
| MobiDBLite | 949 | 1092 | 144 | - | – | |
| MobiDBLite | 988 | 1004 | 17 | - | – | |
| MobiDBLite | 1046 | 1092 | 47 | - | – | |
| MobiDBLite | 1230 | 1261 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Helicase activity | Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi2g1v0417100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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